The DOI matches its Crossref record; 21 of the 21 references it cites were found in a registry or an index.
A contig assembly program based on sensitive detection of fragment overlaps
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Basic local alignment search tool
Altschul, S. F., Gish, W., Miller, W., Myers, E. W., & Lipman, D. J. (1990) · Journal of Molecular Biology · doi:10.1006/jmbi.1990.9999 · Cited by 98,669
Colowick, S. P., Joshi, M. D., Jagannathan, & KAPLAN, N. O. (1966) · Cited by 26,137
Needleman, S. B., & Wunsch, C. D. (1970) · Journal of Molecular Biology · doi:10.1016/0022-2836(70)90057-4 · Cited by 11,288
Improved tools for biological sequence comparison.
Pearson, W. R., & Lipman, D. J. (1988) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.85.8.2444 · Cited by 11,227
Identification of common molecular subsequences
Smith, T. F., & Waterman, M. S. (1981) · Journal of Molecular Biology · doi:10.1016/0022-2836(81)90087-5 · Cited by 9,940
Time Warps, String Edits, and Macromolecules: The Theory and Practice of Sequence Comparison
Sankoff, D., & Kruskal, J. B. (1983) · Medical Entomology and Zoology · Cited by 1,915
Optimal alignments in linear space
Myers, E. W., & Miller, W. (1988) · Bioinformatics · doi:10.1093/bioinformatics/4.1.11 · Cited by 1,235
A linear space algorithm for computing maximal common subsequences
Hirschberg, D. S. (1975) · Communications of the ACM · doi:10.1145/360825.360861 · Cited by 1,093
A time-efficient, linear-space local similarity algorithm
Huang, X., & Miller, W. (1991) · Advances in Applied Mathematics · doi:10.1016/0196-8858(91)90017-d · Cited by 1,004
Self-citationGenomic mapping by fingerprinting random clones: A mathematical analysis
Lander, E. S., & Waterman, M. S. (1988) · Genomics · doi:10.1016/0888-7543(88)90007-9 · Cited by 961
Cited by
CAP3: A DNA Sequence Assembly Program
Huang, X., & Madan, A. (1999) · Genome Research · doi:10.1101/gr.9.9.868 · Cited by 5,261
Self-citationHigh-Throughput Gene Mapping in Caenorhabditis elegans
Swan, K. A., Curtis, D. E., McKusick, K. B., Voinov, A. V., Mapa, F. A., & Cancilla, M. R. (2002) · Genome Research · doi:10.1101/gr.208902 · Cited by 616
Berbee, M. L., Pirseyedi, M., & Hubbard, S. (1999) · Mycologia · doi:10.2307/3761627 · Cited by 409
A New Algorithm for DNA Sequence Assembly
IDURY, R. M., & WATERMAN, M. S. (1995) · Journal of Computational Biology · doi:10.1089/cmb.1995.2.291 · Cited by 342
Optimization of de novo transcriptome assembly from next-generation sequencing data
Surget-Groba, Y., & Montoya-Burgos, J. I. (2010) · Genome Research · doi:10.1101/gr.103846.109 · Cited by 339
Metadata
- Authors
- Huang, X.
- Venue
- Genomics
- Publisher
- Elsevier BV
- Published
- 1992-09
- Volume
- 14
- Issue
- 1
- Pages
- 18-25
- ISSN
- 0888-7543 (ISSN-L)
- OpenAlex
- W2014195831
- Cited by
- 296
- References
- 21
- FWCI
- 2.80
- Type
- journal article
- Language
- en
- Open access
- closed
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: A contig assembly program based on sensitive detection of fragment overlaps. https://app.cochat.ai/papers/10.1016/s0888-7543(05)80277-0
- The paper
- Huang, X. (1992). A contig assembly program based on sensitive detection of fragment overlaps. Genomics. https://doi.org/10.1016/s0888-7543(05)80277-0
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
