From diffusion tractography to quantitative white matter tract measures: a reproducibility study
Abstract
The aim of this study is to propose methods for assessing the reproducibility of diffusion tractography algorithms in future clinical studies and to show their application to the tractography algorithm developed in our unit, fast marching tractography (FMT). FMT estimates anatomical connectivity between brain regions using the information provided by diffusion tensor imaging. Three major white-matter pathways were investigated in 11 normal subjects--anterior callosal fibers, optic radiations, and pyramidal tracts. FMT was used to generate maps of connectivity metric, and regions of voxels with highest connectivity metric to an anatomically defined starting point were identified for each tract under investigation. The reproducibilities of tract-"normalized" volume (NV) and fractional anisotropy (FA) measurements were assessed over such regions. The values of tract volumes are consistent with the postmortem data. Coefficients of variation (CVs) for FA and NV ranged from 1.7 to 7.1% and from 2.2 to 18.6%, respectively. CVs were lowest in the anterior callosal fibers (range: 1.7- 7.8%), followed by the optic radiations (range: 1.2-18.6%) and pyramidal tracts (range: 2.6-15.5%), suggesting that fiber organization plays a role in determining the level of FMT reproducibility. In conclusion, these findings underline the importance of assessing the reliability of diffusion tractography before investigating white matter pathology.
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Sampling of microstructural measures along fiber pathways can be done by generating a binary mask of voxels through which streamlines pass and sampling within this mask, or by sampling at each point of the streamlines from a pre-calculated microstructure image.
“This sampling may be done by first generating a binary mask that defines the voxels through which streamlines pass and then sampling from an underlying microstructure image within this mask (Ciccarelli et al., 2003; Heiervang et al., 2006; Kunimatsu et al., 2004; Voineskos et al., 2010). The sampling may alternatively be done by sampling microstructural measures at each point of the streamlines”
From Quantitative mapping of the brain’s structural connectivity using diffusion MRI tractography: A review (2022) · cites this paper as Ciccarelli et al., 2003
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References 45 · Cited by 228
- Authors
- Ciccarelli, O., Parker, G. J. M., Toosy, A. T., Wheeler-Kingshott, C. A. M., Barker, G. J., Boulby, P. A., Miller, D. H., & Thompson, A. J.
- Affiliations
- National Hospital for Neurology and Neurosurgery (GB)
- University of Manchester (GB)
- Epilepsy Society (GB)
- Corresponding author
- Thompson, A.J.
- Venue
- NeuroImage
- Publisher
- Elsevier BV
- Published
- 2003-02
- Volume
- 18
- Issue
- 2
- Pages
- 348-359
- ISSN
- 1053-8119 (ISSN-L)
- OpenAlex
- W2041545311
- Cited by
- 228
- References
- 45
- Citations by year
- 2026: 1 · 2025: 3 · 2024: 1 · 2022: 3 · 2021: 5 · 2020: 1 · 2019: 5 · 2018: 4 · 2017: 4 · 2016: 3 · 2015: 13 · 2014: 11 · 2013: 19 · 2012: 13
- FWCI
- 17.67
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- NeuroImage (publishedVersion)
- PubMed (publishedVersion)
- UCL Discovery (University College London) (submittedVersion)
- Research Portal (King's College London) (submittedVersion)
- Research Explorer (The University of Manchester) (submittedVersion)
- Funders
- Teva Pharmaceutical Industries
- Multiple Sclerosis Society
- Topics
- Health Sciences › Medicine › Radiology, Nuclear Medicine and Imaging › Advanced Neuroimaging Techniques and Applications
- Life Sciences › Neuroscience › Cognitive Neuroscience › Functional Brain Connectivity Studies
- Health Sciences › Medicine › Neurology › Cerebrovascular and genetic disorders
- Keywords
- diffusion tractography, reproducibility, white matter tracts, fractional anisotropy, tract volume, anterior commissure, optic radiation, corticospinal tract, diffusion tensor imaging, structural connectivity
- MeSH terms
- Adult, Algorithms, Brain, Brain Mapping, Corpus Callosum, Dominance, Cerebral, Female, Humans, Image Processing, Computer-Assisted, Male, Middle Aged, Nerve Fibers, Myelinated, Neural Pathways, Pyramidal Tracts, Visual Pathways, Reproducibility of Results, Observer Variation, Anisotropy, Echo-Planar Imaging, Diffusion Magnetic Resonance Imaging
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