The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.
Development of an Empirical Force Field for Silica. Application to the Quartz−Water Interface
Open accessAbstract
Interactions of pulverized crystalline silica with biological systems, including the lungs, cause cell damage, inflammation, and apoptosis. To allow computational atomistic modeling of these pathogenic processes, including interactions between silica surfaces and biological molecules, new parameters for quartz, compatible with the CHARMM empirical force field were developed. Parameters were optimized to reproduce the experimental geometry of alpha-quartz, ab initio vibrational spectra, and interactions between model compounds and water. The newly developed force field was used to study interactions of water with two singular surfaces of alpha-quartz, (011) and (100). Properties monitored and analyzed include the variation of the density of water molecules in the plane perpendicular to the surface, disruption of the water H-bond network upon adsorption, and space-time correlations of water oxygen atoms in terms of Van Hove self-correlation functions. The vibrational density of states spectra of water in confined compartments were also computed and compared with experimental neutron-scattering results. Both the attenuation and shifting to higher frequencies of the hindered translational peaks upon confinement are clearly reproduced by the model. However, an upshift of librational peaks under the conditions of model confinement still remains underrepresented at the current empirical level.
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Citations
Cites
Computer Simulation of Liquids
Allen, M. P., & Tildesley, D. J. (2017) · doi:10.1093/oso/9780198803195.001.0001 · Cited by 20,945
Fluidity of water confined to subnanometre films
Raviv, U., Laurat, P., & Klein, J. (2001) · Nature · doi:10.1038/35092523 · Cited by 660
Cited by
Emami, F. S., Puddu, V., Berry, R. J., Varshney, V., Patwardhan, S. V., Perry, C. C., & Heinz, H. (2014) · Chemistry of Materials · doi:10.1021/cm500365c · Cited by 567
Fatigue-resistant adhesion of hydrogels
Liu, J., Lin, S., Liu, X., Qin, Z., Yang, Y., Zang, J., & Zhao, X. (2020) · Nature Communications · doi:10.1038/s41467-020-14871-3 · Cited by 420
Water−Silica Force Field for Simulating Nanodevices
Cruz-Chu, E. R., Aksimentiev, A., & Schulten, K. (2006) · The Journal of Physical Chemistry B · doi:10.1021/jp063896o · Cited by 323
Molecular Dynamics Simulations of Water Structure and Diffusion in Silica Nanopores
Bourg, I. C., & Steefel, C. I. (2012) · The Journal of Physical Chemistry C · doi:10.1021/jp301299a · Cited by 286
Metadata
- Authors
- Lopes, P. E. M., Murashov, V., Tazi, M., Demchuk, E., & MacKerell, A. D.
- Venue
- The Journal of Physical Chemistry B
- Publisher
- American Chemical Society (ACS)
- Published
- 2006-01-26
- Volume
- 110
- Issue
- 6
- Pages
- 2782-2792
- ISSN
- 1520-5207 (ISSN-L)
- 1520-6106
- OpenAlex
- W2018302267
- Cited by
- 235
- References
- 2
- FWCI
- 4.43
- Type
- journal article
- Language
- en
- Open access
- green
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