Coarse master equations for peptide folding dynamics

Cited by (472)

Items 301–400 of 472

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20. A Simple Model Predicts Experimental Folding Rates and a Hub-Like Topology
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21. Reconciling Intermediates in Mechanical Unfolding Experiments with Two-State Protein Folding in Bulk
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41. Combination of Markov State Models and Kinetic Networks for the Analysis of Molecular Dynamics Simulations of Peptide Folding
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42. Transition Paths of Met-Enkephalin from Markov State Modeling of a Molecular Dynamics Trajectory
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43. Observation uncertainty in reversible Markov chains
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44. Non-Exponential Kinetics and a Complete Folding Pathway of an α-Helical Heteropeptide: Direct Observation and Comprehensive Molecular Dynamics
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45. Computational Opportunities and Challenges in Finding Cyclic Peptide Modulators of Protein–Protein Interactions
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46. Aggregation dynamics of charged peptides in water: Effect of salt concentration
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49. Systematically Constructing Kinetic Transition Network in Polypeptide from Top to Down: Trajectory Mapping
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50. Structure and reorientational dynamics of angiotensin I and II: a microscopic physical insight
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51. Molecular Modeling of Peptides
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52. Hybrid Refinement of Heterogeneous Conformational Ensembles Using Spectroscopic Data
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53. Analysis of molecular dynamics simulations of 10-residue peptide, chignolin, using statistical mechanics: Relaxation mode analysis and three-dimensional reference interaction site model theory
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54. Markov State Models of Protein–Protein Encounters
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55. Communication: Role of explicit water models in the helix folding/unfolding processes
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56. Two-step relaxation mode analysis with multiple evolution times applied to all-atom molecular dynamics protein simulation
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57. Conformational analysis of replica exchange MD: Temperature-dependent Markov networks for FF amyloid peptides
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64. The vibrational spectrum of the hydrated alanine-leucine peptide in the amide region from IR experiments and first principles calculations
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