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Cited by 99Genetic diversity and population structureGenetic Mapping and Diversity in Plants and AnimalsGenetics and Plant Breeding

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Assessment of genetic variability of olive varieties by microsatellite and AFLP markers

Bandelj, Dunja, Jakše, Jernej, Javornik, Branka·2004·Euphytica
DOI 10.1023/b:euph.0000019552.42066.10
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Abstract

Fourteen developed microsatellite markers were characterized for their use in genotyping and diversity studies of olive varieties. After optimisation of microsatellite assay and allele sizing, ninety-six alleles were found in nineteen varieties, with an average of 6.8 alleles per locus. The characteristics of the microsatellite markers were used to identify markers that can be reliably applied for variety genotyping. Such features were the generation of complex banding patterns supported by underlying allele sequences, `short allele dominance', an unstable repeat structure and a low number of alleles. AFLP analysis was performed on the same set of olive varieties using eight primer pair combinations. The genetic relationships among nineteen olive varieties were compared on the basis of microsatellite and AFLP polymorphisms. Genetic distances between all pairwise combinations of the varieties were calculated using Jaccard's coefficient of similarity and dendrograms were constructed by the UPGMA method. The results of clustering analysis with both molecular systems showed the common genetic background of Tuscan varieties, and genetic divergence within Slovene olive germplasm. Slovenian varieties `Buga', `Štorta' and `Samo' might represent regionally selected olives, while `Zelenjak' and `Črnica' are probably derived from the Central Italian region. The predominant local `Istrska belica' was introduced to Slovenia independently from the other regional varieties and showed the lo…

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Research works printed but not linked: 30

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Metadata

Authors
Bandelj, D., Jakše, J., & Javornik, B.
Affiliations
  • Znanstveno-raziskovalno središče Koper (SI)
  • University of Ljubljana (SI)
Corresponding author
Javornik, Branka
ORCID
Venue
Euphytica
Publisher
Springer Science and Business Media LLC
Published
2004-04
Volume
136
Issue
1
Pages
93-102
ISSN
  • 0014-2336 (ISSN-L)
  • 1573-5060
DOI
10.1023/b:euph.0000019552.42066.10
OpenAlex
W2038070615
Cited by
99
References
0
Citations by year
2026: 1 · 2025: 3 · 2024: 6 · 2023: 4 · 2022: 3 · 2021: 5 · 2020: 4 · 2019: 3 · 2018: 5 · 2017: 6 · 2016: 3 · 2015: 7 · 2014: 4 · 2013: 6 · 2012: 4
FWCI
3.00
Type
journal article
Language
en
Open access
closed
Licence
Locations
Euphytica (publishedVersion)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic diversity and population structure
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic Mapping and Diversity in Plants and Animals
  • Life Sciences › Agricultural and Biological Sciences › Plant Science › Genetics and Plant Breeding
Keywords
olive cultivars, Olea europaea, genetic variation, microsatellite markers, AFLP markers, genetic diversity, genetic relatedness, olive germplasm

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