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IMGT/HLA Database – a sequence database for the human major histocompatibility complex
Abstract
The IMGT/HLA Database is a specialist database for sequences of the human major histocompatibility (MHC) system. It includes all the HLA sequences officially recognised and named by the WHO Nomenclature Committee for Factors of the HLA System. The database provides users with online tools and facilities for the retrieval and analysis of these sequences. These include allele reports, alignment tools and a detailed database of all source cells. The online IMGT/HLA submission tool allows the submission of both new and confirmatory allele sequences directly to the WHO Nomenclature Committee for Factors of the HLA System. The latest version (release 1.4.1, November 1999) contains 1,015 HLA alleles from over 2,270 component sequences derived from the EMBL/GenBank/DDBJ databases. From its release in December 1998 until December 1999 the IMGT/HLA website received approximately 100,000 hits. The database currently focuses on the human major histocompatibility complex but will be used as a model system to provide specialist databases for the MHC sequences of other species.
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Cited by
The IPD and IMGT/HLA database: allele variant databases
Robinson, J., Halliwell, J. A., Hayhurst, J. D., Flicek, P., Parham, P., & Marsh, S. G. E. (2015) · Nucleic Acids Research · doi:10.1093/nar/gku1161 · Cited by 1,740
Self-citationKIR: Diverse, Rapidly Evolving Receptors of Innate and Adaptive Immunity
Vilches, C., & Parham, P. (2002) · Annual Review of Immunology · doi:10.1146/annurev.immunol.20.092501.134942 · Cited by 986
Self-citationNomenclature for Factors of the HLA System, 2004
Marsh, S. G. E., Albert, E. D., Bodmer, W. F., Bontrop, R. E., Dupont, B., Erlich, H. A., Geraghty, D. E., Hansen, J. A., Hurley, C. K., Mach, B., et al. (2005) · Human Immunology · doi:10.1016/j.humimm.2005.02.002 · Cited by 818
Self-citationThe complex transcriptional landscape of the anucleate human platelet
Bray, P. F., McKenzie, S. E., Edelstein, L. C., Nagalla, S., Delgrosso, K., Ertel, A., Kupper, J., Jing, Y., Londin, E., Loher, P., et al. (2013) · BMC Genomics · doi:10.1186/1471-2164-14-1 · Cited by 802
Sarkizova, S., Klaeger, S., Le, P. M., Li, L. W., Oliveira, G., Keshishian, H., Hartigan, C. R., Zhang, W., Braun, D. A., Ligon, K. L., et al. (2020) · Nature Biotechnology · doi:10.1038/s41587-019-0322-9 · Cited by 499
Metadata
- Authors
- Robinson, J., Malik, A., Parham, P., Bodmer, J. G., & Marsh, S. G. E.
- Venue
- Tissue Antigens
- Publisher
- Wiley
- Published
- 2000-03
- Volume
- 55
- Issue
- 3
- Pages
- 280-287
- ISSN
- 0001-2815 (ISSN-L)
- 1399-0039
- OpenAlex
- W2156827437
- Cited by
- 694
- References
- 0
- FWCI
- 11.15
- Type
- journal article
- Language
- en
- Open access
- closed
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- Robinson, J., Malik, A., Parham, P., Bodmer, J. G., & Marsh, S. G. E. (2000). IMGT/HLA Database – a sequence database for the human major histocompatibility complex. Tissue Antigens. https://doi.org/10.1034/j.1399-0039.2000.550314.x
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