Chromatin deacetylation by an ATP-dependent nucleosome remodelling complex

Tong, Jeffrey K., Hassig, Christian A., Schnitzler, Gavin R., Kingston, Robert E., Schreiber, Stuart L.·1998·Nature

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  1. Human genes involved in chromatin remodeling in transcription initiation, and associated diseases: An overview using the GENATLAS database.
    Magali Roux-Rouquie, M. Chauvet, Arnold Munnich, J. Frézal · 1999 · Molecular Genetics and Metabolism
  2. The Nucleosome Remodeling and Deacetylase Complex in Development and Disease
    Jeannine M. Basta, Michael I. Rauchman · 2017 · Elsevier eBooks
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  5. Epigenetic Regulation of Phase Transitions in Arabidopsis thaliana
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  6. Nervous system development and disease: A focus on trithorax related proteins and chromatin remodelers
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    Martine Pastorcic, Hriday K. Das · 2007 · FEBS Journal
  9. Isolation and characterization of histone H3 lysine 4 demethylase-containing complexes
    M LEE, Christopher Wynder, Jessica A. Norman, Ramin Shiekhattar · 2006 · Methods
  10. In vivo base editing of Chd3 rescues behavioural abnormalities in mice
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  14. Dissecting the molecular mechanism of nuclear receptor action: transcription coactivators and corepressors
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  15. Regulation of chromatin structure during thymic T cell development
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  16. Expression, purification and characterization of the human MTA2-RBBP7 complex
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  30. Inhibition of MTA2 and MTA3 induces mesendoderm specification of human embryonic stem cells
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    Wenjuan Li, Xiaoling Zhang, Qingche Zhang, Qingzhu Li, Yanzhuo Li, Yanfang Lv, Yue Liu, Ying Cao, Huamei Wang, Xiangsong Chen et al. · 2024 · PLANT PHYSIOLOGY
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    Yasushi Toh, Nicolson Gl · 2011 · Atlas of Genetics and Cytogenetics in Oncology and Haematology
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    Gongyi Zhang · 2024 · Frontiers in Epigenetics and Epigenomics
  49. [Regulation Mechanism of MTA3 in the Apoptosis of NSCLC Cells].
    Haiying Li, Qingling Wang, Lin Zhang, Haijun Bao, Heng Zhang · 2015 · Europe PMC (PubMed Central)
  50. With NuRD, HDACs Go “Nerdy”
    Yi Eve Sun, Liming Cheng, Keping Hu · 2014 · Developmental Cell
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    John R. Jenkins · 2008 · British Journal of Radiology
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    Thomas G. Fazzio, Oliver J. Rando · 2012 · The EMBO Journal
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    Yun-Bo Shi · 2019 · Frontiers in bioscience
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    Jianfu Zhang, Jianzhao Peng, Yiran Huang, Ling Hua Meng, Qingrong Li, Feng Xiong, Xiaoyu Li · 2020 · Angewandte Chemie
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    Steve van Nocker, María Julissa Ek‐Ramos · 2007 · Blackwell Publishing Ltd eBooks
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    Marta Teperek, Kei Miyamoto, Angela Simeone, Renata Feret, Michael J. Deery, John Bertrand Gurdon, Jérôme Jullien · 2014 · International Journal of Molecular Sciences
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    Ming Tang, Huacheng Luo, Jianrong Lu · 2015 · Elsevier eBooks
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    Zoe H. Mitchell, Joery den Hoed, Willemijn J. J. Claassen, Martina Demurtas, Laura Deelen, Philippe M. Campeau, Karen J. Liu, Simon E. Fisher, Marco Trizzino · 2025 · EMBO Reports
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    Gregory W. Peek, Trygve O. Tollefsbol · 2011 · Clinical Epigenetics
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    SM Pandey · 2016 · Global Journal of Zoology
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    Donald D. Ruhl, W. Lee Kraus · 2009 · Progress in molecular biology and translational science
  64. HATs and HDACs
    Timothy A. Bolger, Todd Cohen, Tso‐Pang Yao · 2007 · Springer eBooks
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    Michaela M. Smolle, Swaminathan Venkatesh · 2013 · Springer eBooks
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    Corey L. Smith · 2004 · The Journal of the American Medical Association (JAMA) Network (American Medical Association)
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