Faster superoxide dismutase mutants designed by enhancing electrostatic guidance

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  1. Comparative study of 7S globulin from Corylus avellana and Solanum lycopersicum revealed importance of salicylic acid and Cu-binding loop in modulating their function
    Meha Shikhi, A. C. JAIN, Dinakar M. Salunke · 2019 · Biochemical and Biophysical Research Communications
  2. Strategies of Antioxidant Defense: Relations to Oxidative Stress
    Helmut Sies · 1995 · Springer eBooks
  3. Selective Inhibition of Fe- versus Cu/Zn-Superoxide Dismutases by 2,3-Dihydroxybenzoic Acid Derivatives.
    Laurent Soulère, Cécile Viodé, Jacques Périé, Pascal Hoffmann · 2002 · Chemical and Pharmaceutical Bulletin
  4. Simulation of Bimolecular Reactions
    Brock A. Luty, James Andrew McCammon · 1993 · Molecular Simulation
  5. Rethinking Leucine Zipper – a ubiquitous signal transduction motif
    Yaroslav Nikolaev, Konstantin V. Pervushin · 2009 · Nature Precedings
  6. SOD1 lactylation impair its enzymatic activity by conformational change to aggravate intervertebral disc degeneration
    Yuyao Zhang, Yu Zhai, Chao Liu, Minghang Chen, Yang Zhang, Zhiqun Bian, Xian Chang, Zhilei Hu, Jianmin Li, Chao Zhang et al. · 2026 · Nature Communications
  7. Dismutation Properties of Purified and GDA Modified CuZnSOD from Chicken Heart
    Lütfiye Arzu Bozkaya, Leman Tarhan · 2004 · Artificial Cells Blood Substitutes and Biotechnology
  8. Novel SOD1 monoclonal antibodies against the electrostatic loop preferentially detect misfolded SOD1 aggregates
    Yuxing Xia, Zhijuan Chen, Guilian M. Xu, David Borchelt, Jacob I. Ayers, Benoit I. Giasson · 2020 · Neuroscience Letters
  9. Functional Mimics of Cu, Zn- Superoxide Dismutase Enzymes
    Raffaele Pietro Bonomo, Giuliana Impellizzeri, Diego La Mendola, Giuseppe Maccarrone, Giuseppe Pappalardo, Anna Maria Santoro, Giovanni Tabbı̀, Graziella Vecchio, Enrico Rizzarelli · 2003 · Springer eBooks
  10. Rhodamine-6G can photosensitize folic acid decomposition through electron transfer
    Kazutaka Hirakawa, Hiroki Ito · 2015 · Chemical Physics Letters
  11. Ofloxacin Metal Complexes: Synthesis, Characterization, Analytical Properties, and DNA Binding Studies
    Ayșegül Gölcü · 2014 · Synthesis and Reactivity in Inorganic Metal-Organic and Nano-Metal Chemistry
  12. Electrostatic effects in trypsin reactions
    Vello Tõugu, Toomas Tiivel, Peeter Talts, Virginius Šikšnis, S. A. Poyarkova, Tönu Kesvatera, Aavo Aaviksaar · 1994 · European Journal of Biochemistry
  13. Copper‐Zinc Superoxide Dismutase in Prokaryotes and Eukaryotes
    Domenico Bordo, Alessandra Pesce, Martino Bolognesi, Maria Elena Stroppolo, Mattia Falconi, Alessandro Desideri · 2004 · Wiley eBooks
  14. Superperfect enzymes
    James Andrew McCammon · 1992 · Current Biology
  15. Protein Deamidation Reduced Digestive Resistance and Amyloid Antigenicity of Soy Proteins via Depolymerization
    Li, Tanghao, Han, Kaining, Lv, Dingyang, Guo, Jian, Wan, Zhili, Bu, Guanhao, Yang, Xiaoquan · 2025 · Journal of Agricultural and Food Chemistry
  16. Computational identification and experimental validation of anti-filarial lead molecules targeting metal binding/substrate channel residues of Cu/Zn SOD1 from Wuchereria bancrofti
    Muthusamy Sureshan, Dhamodharan Prabhu, Kadhirvel Saraboji · 2022 · Journal of Biomolecular Structure and Dynamics
  17. Soft Vibrational Modes Predict Breaking Events during Force-Induced Protein Unfolding
    Mona Habibi, Steven Samuel Plotkin, Jörg Rottler · 2018 · Biophysical Journal
  18. Evaluation of the kinetics of electrostatically steered protein dimerization using Weighted-Ensemble Brownian dynamics
    Eric W. Fisher, Atipat Rojnuckarin, Sangtae Kim · 2000 · Journal of Molecular Structure THEOCHEM
  19. Responses of Superoxide Dismutases to Oxidative Stress in Arabidopsis thaliana
    Hatice Neval Erturk · 1998 · VTechWorks (Virginia Tech)
  20. Adjusting force distributions in functional site of scorpion toxin BMK M1 by cooperative effect of disulfide bonds
    Majid Taghdir, Hossein Naderi‐Manesh · 2006 · Biochemical and Biophysical Research Communications
  21. Amyotrophic Lateral Sclerosis
    David S., J. Ashley, D. Elizabeth, J. Jefferson P. Perry · 2011 · InTech eBooks
  22. A spectroscopic and molecular dynamics study of native and of a mutant of Xenopus laevis Cu,Zn superoxide dismutase: mechanistic consequences of replacing four charged amino acids on the `electrostatic' loop
    Mattia Falconi, Francesca Venerini, Alessandro Desideri · 1998 · Biophysical Chemistry
  23. Loss of Oxidation-Reduction Specificity in Amyotrophic Lateral Sclerosis-Associated CuZnSOD Mutants
    Carla Café, Maria Pia Testa, Patrick J. Sheldon, William P. French, Lisa Ellerby, Dale E. Bredesen · 2000 · Journal of Molecular Neuroscience
  24. Phylogenetic spread of sequence data affects fitness of SOD1 consensus enzymes: Insights from sequence statistics and structural analyses
    Venuka Durani Goyal, Thomas J. Magliery · 2018 · Proteins Structure Function and Bioinformatics
  25. Development of In Silico Analysis and Molecular Dynamics Simulation on L67P and D76Y Mutants of the Human Superoxide Dismutase 1(hSOD1) Related to Amyotrophic Lateral Sclerosis.
    Payam Baziyar, Bagher Seyedalipour, Saman Hosseinkhani, Ehsan Nazifi · 2022 · PubMed Central
  26. DIRECTED EVOLUTION OF CYANIDE DEGRADING ENZYMES
    Mary Abou-Nader Crum · 2012
  27. Calculation of the Absolute Rate of Human Cu/Zn Superoxide Dismutases from Atomic-Level Molecular Dynamics Simulations
    Jin-Uk Lee, Woo-Jin Lee, Hwang-Seo Park, Sangyoub Lee · 2012 · Bulletin of the Korean Chemical Society
  28. On the molecular spin density and the electrostatic potential as determinants of the relaxivity of metalloporphyrins
    Gustavo Mercier · 1995 · Magnetic Resonance Imaging
  29. Selective neutrality and enzyme kinetics
    Lloyd Demetrius · 1997 · Journal of Molecular Evolution
  30. Structural biology and diabetes mellitus: molecular pathogenesis and rational drug design
    Tom L. Blundell, Roderick E. Hubbard, Michael Aaron Weiss · 1992 · Diabetologia
  31. Copper‐cobalt superoxide dismutase: A re‐examination of the 1H NMR spectrum through a novel selectively deuteriated derivative
    Ivano Bertini, Mario Piccioli, Andrea Scozzafava, Maria Silvia Viezzoli · 1993 · Magnetic Resonance in Chemistry
  32. Molecular Principles of Proton-Coupled Quinone Reduction in the Membrane-Bound Superoxide Oxidase
    Daniel Riepl, Abbas Abou Hamdan, Jonas Gellner, Olivier Biner, Dan Sjöstrand, Martin Högbom, Christoph von Ballmoos, Ville R. I. Kaila · 2025 · Journal of the American Chemical Society
  33. Exploring Folding Aspects of Monomeric Superoxide Dismutase
    Paulo Ricardo Mouro, Ana Paula Ribeiro Povinelli, Vitor B. P. Leite, Jorge Chahine · 2020 · The Journal of Physical Chemistry B
  34. Copper-Zinc Superoxide Dismutase: Mechanistic and Biological Studies
    Joan Selverstone Valentine, Lisa Ellerby, Janet A. Graden, Clinton R. Nishida, Edith Butler Gralla · 1995 · Springer eBooks
  35. Kinetic effects of mutations of charged residues on the surface of a dimeric hemoglobin: insights from Brownian dynamics simulations
    Eric W. Fisher, Atipat Rojnuckarin, Sangtae Kim · 2001 · Journal of Molecular Structure THEOCHEM
  36. Future directions for combining molecular and continuum models in protein simulations
    Gary Huber · 1998 · Progress in Biophysics and Molecular Biology
  37. Proton ENDOR spectroscopy of cyanide-inhibited copper-zinc superoxide dismutase in randomly oriented samples
    Hans-Josef Scholl, Jürgen Hüttermann, Maria-Silvia Viezzoli · 1998 · Inorganica Chimica Acta
  38. Reactive Oxygen Species
    Virender K. Sharma · 2012 · Wiley eBooks
  39. Nanozymes with superoxide dismutase activity: Mechanisms, classification, and biomedical applications
    Xiaofan Liu, Wenqing Li, Chengyu liu, Zhennan Wu, Yanan Li · 2026 · Free Radical Biology and Medicine
  40. Structure of a superoxide dismutase from a tardigrade: Ramazzottius varieornatus strain YOKOZUNA-1
    Kee-Shin Sim, Tsuyoshi Inoue A · 2023 · Acta Crystallographica Section F Structural Biology Communications
  41. Phenothiazine as novel human superoxide dismutase modulators: discovery, optimization, and biological evaluation
    Homa Azizian, Simin Forooghian, Arash Amanlou, Horacio Pérez‐Sánchez, Massoud Amanlou · 2021 · Journal of Biomolecular Structure and Dynamics
  42. Diffusion control
    Baron Peters · 2017 · Elsevier eBooks
  43. Effects of local repositioning of charged surface residues on the kinetics of protein dimerization probed by Brownian dynamics simulations
    Eric W. Fisher, Atipat Rojnuckarin, Sangtae Kim · 2002 · Journal of Molecular Structure THEOCHEM
  44. Nitrogen‐Boosted H 2 O 2 Production of Arginine‐Polyphenol Nanozyme Drives Oxidative Eustress for Hair Regeneration
    Yifei Wang, Yaojia Yang, Aoxue Wang, Chen Shen, Shenliang Tan, Changsheng Liu, Yuzheng Zhao, Xue Qu · 2025 · Advanced Science
  45. From hemocuprein to CSRP: the many faces of Cu/Zn superoxide dismutase
    Ryan L. Peterson, Valeria Culotta · 2026 · Metallomics
  46. Neurological Diseases can be Regulated by Phase Separation
    Colin McCaig · 2025 · Reviews of physiology, biochemistry and pharmacology
  47. Effect of Flap Mutation I54L/M in Inhibition of Human Immunodeficiency Virus Type 1 Protease: Relationship to Drug Resistance
    Rituraj Purohit · 2010 · Journal of Computer Science & Systems Biology
  48. Superoxide Dismutase and Catalase
    Julio F. Turrens · 2014 · Elsevier eBooks
  49. Active transport of ions across membranes: energetic role of electrostatics and binding site asymmetry
    Ming‐Hong Hao, Stephen C. Harvey · 1995 · Biochimica et Biophysica Acta (BBA) - Biomembranes
  50. Structure, Function, and Nutrition of Zinc-Containing Proteins in Foodstuffs
    Kai Zhou, Guanghua Zhao · 2017 · Springer eBooks
  51. Four alternative splicing transcripts of intracellular copper/zinc superoxide dismutase 1 in Oxya chinensis
    Haihua Wu, Jing Liu, Xuhan Zhang, Xueyao Zhang, Jianzhen Zhang, Enbo Ma · 2021 · International Journal of Biological Macromolecules
  52. Simulation of enzyme-substrate interactions: the diffusional encounter step.
    Rebecca C. Wade · 1995 · Acta Biochimica Polonica
  53. Transition Metals in Catalysis and Electron Transport
    David E. Metzler, Carol M. Metzler, David J. Sauke · 2001 · Elsevier eBooks
  54. Origins of Enzyme Catalytic Power
    Narayan S. Punekar · 2018 · Springer eBooks
  55. Exploring the Folding Mechanism of Dimeric Superoxide Dismutase
    Paulo Ricardo Mouro, Murilo N. Sanches, Vitor B. P. Leite, Jorge Chahine · 2023 · The Journal of Physical Chemistry B
  56. Structural Insights into the Dynamics of Water in SOD1 Catalysis and Drug Interactions
    İlkin Yapici, Arda Gorkem Tokur, Belgin Sever, Halil I. Ciftci, A. Nazlı Başak, Hasan DeMi̇rci̇ · 2025 · International Journal of Molecular Sciences
  57. Nucleation and kinetics of SOD1 aggregation in human cells for ALS1
    Aron Workman · 2020 · Molecular and Cellular Biochemistry
  58. Cloning and high-level expression of monomeric human superoxide dismutase 1 (SOD1) and its interaction with pyrimidine analogs
    Marcia LeVatte, Matthias Lipfert, Dipankar Roy, Andriy Kovalenko, David Scott Wishart · 2021 · PLoS ONE
  59. Using patient-derived cell models to investigate the role of misfolded SOD1 in ALS
    Elin Forsgren · 2017 · DiVA at Umeå University (Umeå University)
  60. Copper‐Zinc Superoxide Dismutase in Prokaryotes and Eukaryotes
    Domenico Bordo, Alessandra Pesce, Martino Bolognesi, Maria Elena Stroppolo, Mattia Falconi, Alessandro Desideri · 2004 · Wiley eBooks
  61. Food enzymes
    Sibel D. Roller, Peter W. Goodenough · 1998 · Springer eBooks
  62. B rownian Dynamics
    Jeffry D. Madura, James M. Briggs, Rebecca C. Wade, Razif R. Gabdoulline · 1998 · Encyclopedia of Computational Chemistry
  63. SOD1´s Law : An Investigation of ALS Provoking Properties in SOD1
    Roberth Byström · 2009 · KTH Publication Database DiVA (KTH Royal Institute of Technology)
  64. Molecular Dynamics Calculations on Metalloproteins
    Lucia Banci, Giovanni Gori Savellini · 1997 · Springer eBooks
  65. Computational Strategies for Modeling Receptor Flexibility in Studies of Receptor-Ligand Interactions
    Rebecca C. Wade, Susanna K. Lüdemann · 1998 · Springer eBooks
  66. Funció del peròxid d'hidrogen en l'aclimatació de "Cistus albidus" L. al dèficit hídric en condicions de camp. Relació estrès hídric-estrès oxidatiu
    Tana Jubany-Marí · 2009 · LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Científicas)
  67. Engineering a protein for peptide detection and allosteric activation
    Marsha Jane Lewis · 2010
  68. Perplexing Protein Puzzles
    Stina Lindman · 2010 · Lund University Publications (Lund University)
  69. Nickelhaltige Enzyme: Die steile Karriere eines lange übersehenen Biometalls
    Wolfgang Kaim, Brigitte E. Schwederski · 2005 · Teubner-Studienbücher. Chemie
  70. Xanthine oxidase-assisted catalysis by dopamine β-hydroxylase: Mechanistic considerations on the role of superoxide anion
    Patrick S. Slama, Marius Réglier · 2007 · Comptes Rendus Chimie
  71. Kupferhaltige Proteine: Die Alternative zu biologischem Eisen
    Wolfgang Kaim, Brigitte E. Schwederski · 1995 · Teubner-Studienbücher. Chemie
  72. ANALYSIS OF SELECTION ON
    Walter F. Eanes · 1999
  73. Simulations of Molecular Mechanisms in Radiation Damage to DNA
    Roman Osman, Chung F. Wong, Karol Mia̧skiewicz · 1995 · Jerusalem Symposia on Quantum Chemistry and Biochemistry
  74. Radiolysis of Metalloproteins
    Diane E. Cabelli · 2010 · WORLD SCIENTIFIC eBooks
  75. Folding and Stability Studies on Amyotrophic Lateral Sclerosis-Associated apo Cu, Zn Superoxide dismutases
    Kenrick A. Vassall · 2009 · UWSpace (University of Waterloo)
  76. Use of protein engineering to study DNA recognition by the E.coli DNA methyltransferase (EcoDam)
    Hany Elsawy · 2009
  77. In Silico Determined Properties of Designed Superoxide Dismutase-1 Mutants Predict ALS-like Phenotypes In Vitro and In Vivo
    Michèle G. DuVal, Luke McAlary, Mona Habibi, Pranav Garg, Mine Sher, Neil R. Cashman, W. Ted Allison, Steven Samuel Plotkin · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
  78. Membrane‐Bound Superoxide Oxidase
    Dan Sjöstrand, Martin Högbom, Christoph von Ballmoos · 2020 · Wiley eBooks
  79. Xylose isomerase from Piromyces: Characterization and engineering for improving S. cerevisiae-based lignocellulosic bioethanol production
    Misun Lee · 2020
  80. Functional design of bacterial superoxide:quinone oxidoreductase
    Abbas Abou Hamdan, Roman Mahler, Philipp Grossenbacher, Olivier Biner, Dan Sjöstrand, Martin Lochner, Martin Högbom, Christoph von Ballmoos · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  81. CHAPTER SYMBIOSIS
    T. A. Sarma · 2012 · CRC Press eBooks
  82. Bibliography
    2009 · Wiley eBooks
  83. Zinc Binding Loop Mutations of hSOD1 Promote Amyloid Fibrils Under Physiological Conditions: Implications for Initiation of Amyotrophic Lateral Sclerosis
    Payam Baziyar, Bagher Seyedalipour, Saman Hosseinkhani · 2022 · SSRN Electronic Journal
  84. Nickelhaltige Enzyme: Die steile Karriere eines lange übersehenen Biometalls
    Wolfgang Kaim, Brigitte E. Schwederski · 1995 · Teubner-Studienbücher. Chemie
  85. Kupferhaltige Proteine: Die Alternative zu biologischem Eisen
    Wolfgang Kaim, Brigitte E. Schwederski · 2005 · Teubner-Studienbücher. Chemie
  86. Kupferhaltige Proteine: Die Alternative zu biologischem Eisen
    Wolfgang Kaim, Brigitte E. Schwederski · 2004 · Teubner-Studienbücher. Chemie
  87. Notizen
    1992 · Nachrichten aus Chemie Technik und Laboratorium
  88. References
    2010 · Elsevier eBooks
  89. Direct relationship between dimeric form and activity in the acidic copper–zinc superoxide dismutase from lemon
    Ratna Annisa Utami, Hiromi Yoshida, Lydia H. Kartadinata, Virgi A. Abdillah, Cut R. Faratilla, DEBBIE SOEFIE RETNONINGRUM, Wangsa Tirta Ismaya · 2023 · Acta Crystallographica Section F Structural Biology Communications
  90. Outstanding Superoxide Dismutase Catalytic Activity Of Simple Peptide‐Based Nickel(II) Complexes
    Pawel Guinard, Sarah Hostachy, Léa Diebold, Jacques Pécaut, Alan Le Goff, Carole Duboc, Pascale Delangle · 2024 · Angewandte Chemie
  91. Role of surface negative charges in agonist binding to the ‘unliganded’ open state of the neuromuscular acetylcholine receptor
    Nadira Khatoon, Tapan K. Nayak · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  92. Origins of Enzyme Catalytic Power
    Narayan S. Punekar · 2025 · Springer eBooks
  93. Puccinia triticina and Salicylic Acid Stimulate Resistance Responses in Triticum aestivum Against Diuraphis noxia Infestation
    Huzaifa Bilal, Willem H. P. Boshoff, Lintle Mohase · 2025 · Plants
  94. MiniSOG as a biodegradable heterogeneous photocatalyst for coupled redox biotransformations
    Emmanouil Broumidis, Francesca Paradisi · 2025 · Materials Advances
  95. Zinc in folding and misfolding of SOD1 : Implications for ALS
    Lina Leinartaité · 2014 · DiVA (Stockholm University)
  96. A Multicopper Oxidase as ultimate artificial photosynthetic mimic
    Iago A. Modenez · 2023
  97. Impact of the spatial distribution of positive charges on the catalytic activity of NiSOD bioinspired complexes
    Pawel Guinard, Jacques Pécaut, Alan Le Goff, Carole Duboc, Pascale Delangle, Sarah Hostachy · 2026 · JBIC Journal of Biological Inorganic Chemistry
  98. Structure-Guided Engineering of Cu/Zn Superoxide Dismutase for Enhanced Catalytic Efficiency and Thermostability
    Abdulqader Al‐Adeeb, Sahibzada Muhammad Aqeel, Hend Sadeq Al-Jaberi, Qiuya Gu, Waleed AL‐Ansi, Qais Ali Al‐Maqtari, Wenlong Liu, Xiaobin Yu · 2026 · Journal of Agricultural and Food Chemistry
  99. Basic conformers in ?-peptides
    1999