The DOI matches its Crossref record; 12 of the 12 references it cites were found in a registry or an index.
Genome sequence of the Brown Norway rat yields insights into mammalian evolution
Open accessOverview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
Altschul, S. (1997) · Nucleic Acids Research · doi:10.1093/nar/25.17.3389 · Cited by 73,302
The sequence of the human genome
Venter, J. C., Adams, M. D., Myers, E. W., Li, P. W., Mural, R. J., Sutton, G. G., Smith, H. O., Yandell, M., Evans, C. A., Holt, R. A., et al. (2001) · Science · doi:10.1126/science.1058040 · Cited by 13,909
Self-citationTandem repeats finder: a program to analyze DNA sequences
Benson, G. (1999) · Nucleic Acids Research · doi:10.1093/nar/27.2.573 · Cited by 9,374
<tt>BLAT</tt> —The <tt>BLAST</tt> -Like Alignment Tool
Kent, W. J. (2002) · Genome Research · doi:10.1101/gr.229202 · Cited by 8,480
Initial sequencing and comparative analysis of the mouse genome
Mouse Genome Sequencing Consortium (2002) · Nature · doi:10.1038/nature01262 · Cited by 7,187
The International HapMap Project
†The International HapMap Consortium, Genotyping centres: Baylor College of Medicine and ParAllele BioScience, Gibbs, R. A., Belmont, J. W., Hardenbol, P., Willis, T. D., Yu, F., Chinese HapMap Consortium, Yang, H., Ch'ang, L.-Y., et al. (2003) · Nature · doi:10.1038/nature02168 · Cited by 6,057
Self-citationThe Evolutionary Fate and Consequences of Duplicate Genes
Lynch, M., & Conery, J. S. (2000) · Science · doi:10.1126/science.290.5494.1151 · Cited by 4,988
The Draft Genome of Ciona intestinalis : Insights into Chordate and Vertebrate Origins
Dehal, P., Satou, Y., Campbell, R. K., Chapman, J., Degnan, B., De Tomaso, A., Davidson, B., Di Gregorio, A., Gelpke, M., Goodstein, D. M., et al. (2002) · Science · doi:10.1126/science.1080049 · Cited by 1,641
LAGAN and Multi-LAGAN: Efficient tools for large-scale multiple alignment of genomic DNA
Brudno, M., Do, C. B., Cooper, G. M., Kim, M. F., Davydov, E., Program, N. C. S., Green, E. D., Sidow, A., & Batzoglou, S. (2003) · Genome Research · doi:10.1101/gr.926603 · Cited by 1,115
Self-citationPhylogenetic Shadowing of Primate Sequences to Find Functional Regions of the Human Genome
Boffelli, D., McAuliffe, J., Ovcharenko, D., Lewis, K. D., Ovcharenko, I., Pachter, L., & Rubin, E. M. (2003) · Science · doi:10.1126/science.1081331 · Cited by 516
Cited by
Lewis, B. P., Burge, C. B., & Bartel, D. P. (2005) · Cell · doi:10.1016/j.cell.2004.12.035 · Cited by 11,855
The ENCODE Project Consortium (2007) · Nature · doi:10.1038/nature05874 · Cited by 5,223
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
Siepel, A., Bejerano, G., Pedersen, J. S., Hinrichs, A. S., Hou, M., Rosenbloom, K., Clawson, H., Spieth, J., Hillier, L. W., Richards, S., et al. (2005) · Genome Research · doi:10.1101/gr.3715005 · Cited by 3,971
Self-citationInternational Chicken Genome Sequencing Consortium (2004) · Nature · doi:10.1038/nature03154 · Cited by 2,750
Genome sequence, comparative analysis and haplotype structure of the domestic dog
members, B. S. P., Lindblad-Toh, K., Wade, C. M., Mikkelsen, T. S., Karlsson, E. K., Jaffe, D. B., Kamal, M., Clamp, M., Chang, J. L., Kulbokas, E. J., et al. (2005) · Nature · doi:10.1038/nature04338 · Cited by 2,568
Self-citation
Metadata
- Authors
- Rat Genome Sequencing Project Consortium, DNA sequencing: Baylor College of Medicine, Gibbs, R. A., Weinstock, G. M., Metzker, M. L., Muzny, D. M., Sodergren, E. J., Scherer, S., Scott, G., Steffen, D., Worley, K. C., Burch, P. E., Okwuonu, G., Hines, S., Lewis, L., DeRamo, C., Delgado, O., Dugan-Rocha, S., Miner, G., Morgan, M., Hawes, A., Gill, R., Holt, C. R. A., Adams, M. D., Amanatides, P. G., Baden-Tillson, H., Barnstead, M., Chin, S., Evans, C. A., Ferriera, S., Fosler, C., Glodek, A., Gu, Z., Jennings, D., Kraft, C. L., Nguyen, T., Pfannkoch, C. M., Sitter, C., Sutton, G. G., Venter, J. C., Woodage, T., Therapeutics, G., Smith, D., Lee, H.-M., Gustafson, E., Cahill, P., Kana, A., Doucette-Stamm, L., Weinstock, K., Fechtel, K., University of Utah, Weiss, R. B., Dunn, D. M., NISC Comparative Sequencing Program, N., Green, E. D., Blakesley, R. W., Bouffard, G. G., BAC library production: Children's Hospital Oakland Research Institute, de Jong, P. J., Osoegawa, K., Zhu, B., BAC fingerprinting: British Columbia Cancer Agency, C. M. S. G. S. C., Marra, M., Schein, J., Bosdet, I., Fjell, C., Jones, S., Krzywinski, M., Mathewson, C., Siddiqui, A., Wye, N., Genome Sequencing Center, W. U. S. O. M., McPherson, J., TIGR, B. E. S., Zhao, S., Fraser, C. M., Shetty, J., Shatsman, S., Geer, K., Chen, Y., Abramzon, S., Nierman, W. C., Sequence assembly: Baylor College of Medicine, Gibbs, R. A., Weinstock, G. M., Havlak, P. H., Chen, R., James Durbin, K., Simons, R., Ren, Y., Song, X.-Z., Li, B., Liu, Y., Qin, X., Affymetrix, A. A. A., Cawley, S., Baylor College of Medicine, Weinstock, G. M., Worley, K. C., Cooney, A. J., Gibbs, R. A., D'Souza, L. M., Martin, K., Qian Wu, J., Gonzalez-Garay, M. L., Jackson, A. R., Kalafus, K. J., McLeod, M. P., Milosavljevic, A., Virk, D., Volkov, A., Wheeler, D. A., Zhang, Z., Case Western Reserve University, Bailey, J. A., Eichler, E. E., Tuzun, E., EBI, W. T. G. C., Birney, E., Mongin, E., Ureta-Vidal, A., Woodwark, C., EMBL, H., Zdobnov, E., Bork, P., Suyama, M., Torrents, D., Fraunhofer-Chalmers Research Centre for Industrial Mathematics, G., Alexandersson, M., Fred Hutchinson Cancer Research Center, Trask, B. J., Young, J. M., Therapeutics, G., Smith, D., Huang, H., Fechtel, K., Wang, H., Xing, H., Weinstock, K., Incyte Corporation, Daniels, S., Gietzen, D., Schmidt, J., Stevens, K., Vitt, U., Wingrove, J., Institut Municipal d'Investigacio Medica, B., Camara, F., Mar Albà, M., Abril, J. F., Guigo, R., The Institute for Systems Biology, Smit, A., Laboratory, L. B. N., Dubchak, I., Rubin, E. M., Couronne, O., Poliakov, A., Max Delbrück Center for Molecular Medicine, Hübner, N., Ganten, D., Goesele, C., Hummel, O., Kreitler, T., Lee, Y.-A., Monti, J., Schulz, H., Zimdahl, H., Max Planck Institute for Molecular Genetics, B., Himmelbauer, H., Lehrach, H., Medical College of Wisconsin, Jacob, H. J., Bromberg, S., Gullings-Handley, J., Jensen-Seaman, M. I., Kwitek, A. E., Lazar, J., Pasko, D., Tonellato, P. J., Twigger, S., MRC Functional Genetics Unit, U. O. O., Ponting, C. P., Duarte, J. M., Rice, S., Goodstadt, L., Beatson, S. A., Emes, R. D., Winter, E. E., Webber, C., MWG-Biotech, Brandt, P., Nyakatura, G., Pennsylvania State University, Adetobi, M., Chiaromonte, F., Elnitski, L., Eswara, P., Hardison, R. C., Hou, M., Kolbe, D., Makova, K., Miller, W., Nekrutenko, A., Riemer, C., Schwartz, S., Taylor, J., Yang, S., Zhang, Y., Roche Genetics and Roche Center for Medical Genomics, Lindpaintner, K., Sanger Institute, Andrews, T. D., Caccamo, M., Clamp, M., Clarke, L., Curwen, V., Durbin, R., Eyras, E., Searle, S. M., Stanford University, Cooper, G. M., Batzoglou, S., Brudno, M., Sidow, A., Stone, E. A., The Center for the Advancement of Genomics, Craig Venter, J., University of Arizona, Payseur, B. A., de Montréal, U., Bourque, G., de Oviedo, U., López-Otín, C., Puente, X. S., University of California, B., Chakrabarti, K., Chatterji, S., Dewey, C., Pachter, L., Bray, N., Yap, V. B., Caspi, A., University of California, S. D., Tesler, G., Pevzner, P. A., University of California, S. C., Haussler, D., Roskin, K. M., Baertsch, R., Clawson, H., Furey, T. S., Hinrichs, A. S., Karolchik, D., Kent, W. J., Rosenbloom, K. R., Trumbower, H., Weirauch, M., University of Wales College of Medicine, Cooper, D. N., Stenson, P. D., University of Western Ontario, Ma, B., Washington University, Brent, M., Arumugam, M., Shteynberg, D., Wellcome Trust Centre for Human Genetics, U. O. O., Copley, R. R., Taylor, M. S., The Wistar Institute, Riethman, H., Mudunuri, U., management:, S., Peterson, J., Guyer, M., Felsenfeld, A., Old, S., Mockrin, S., & Collins, F.
- Venue
- Nature
- Published
- 2004-04-01
- Volume
- 428
- Issue
- 6982
- Pages
- 493-521
- ISSN
- 0028-0836 (ISSN-L)
- 1476-4687
- OpenAlex
- W2097040991
- Cited by
- 2,164
- References
- 12
- FWCI
- 80.80
- Type
- journal article
- Language
- en
- Open access
- bronze
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: Genome sequence of the Brown Norway rat yields insights into mammalian evolution. https://app.cochat.ai/papers/10.1038/nature02426
- The paper
- Rat Genome Sequencing Project Consortium, DNA sequencing: Baylor College of Medicine, Gibbs, R. A., Weinstock, G. M., Metzker, M. L., Muzny, D. M., Sodergren, E. J., Scherer, S., Scott, G., Steffen, D., Worley, K. C., Burch, P. E., Okwuonu, G., Hines, S., Lewis, L., DeRamo, C., Delgado, O., Dugan-Rocha, S., Miner, G., . . . Collins, F. (2004). Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Nature. https://doi.org/10.1038/nature02426
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.