A community computational challenge to predict the activity of pairs of compounds

Cited by (320)

Items 301–320 of 320

  1. Integrative Analysis of EGF, OSM, and TGFB Signaling Pathways Reveals Synergistic Mechanisms Driving Cell Motility Through CXCR2 Chemotactic Signaling and CREB Activation
    Ian C. Mclean, Sean M. Gross, Jeremy Copperman, Daniel S. Derrick, Laura M. Heiser · 2025 · bioRxiv
  2. Systems chemical biology: Integrating medicinal chemistry and systems biology for drug discovery
    R.S. Wang, Huji Xu, Joseph Loscalzo · 2025 · Elsevier eBooks
  3. ChemBERTaPolyPharm: Modeling polypharmacy side effects with ChemBERTa and PubMed Encoders
    Anastasiya A. Gromova, Anthony S. Maida · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
  4. Systematic elucidation and pharmacologic targeting of non-oncogene dependencies in imatinib-resistant gastrointestinal stromal tumor
    Prabhjot Singh Mundi, Adina Grunn, Arsenije Kojadinovic, Sergey Pampou, Charles Karan, Ronald B. Realubit, Cristina I. Caescu, Hanina H. Hibshoosh, Mahalaxmi Aburi, Mariano J. Alvarez et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
  5. Enhancing Drug Synergy Prediction via flexible Fusion of Multimodal Heterogeneous Data
    Yugui Xu, Hao Yuan, Xinyu Mao, Zhigan Zhou, Yuhang Liu, Shuwen Xiong, Zixuan Wang, Yongqing Zhang · 2025 · International Joint Conference on Neural Networks (IJCNN)
  6. Hidden-driver inference reveals synergistic brain-penetrant therapies for medulloblastoma
    Jingjing Liu, Yang Xu, Mingrui Zhu, Xinran Dong, Honglei Zhou, Brandon M. Bianski, Barbara Jonchère, Wenwei Lin, Xiang Fu, Sheetal Bhatara et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
  7. PMDSynergy: Pre-training-based multi-dimensional fusion model for cancer drug synergy prediction
    Ruoyin Zhang, Siyu Tao, Yimiao Feng, Jie Zheng · 2025 · Annual International Conference of the IEEE Engineering in Medicine and Biology Society
  8. Additional file 1 of DeSIDE-DDI: interpretable prediction of drug-drug interactions using drug-induced gene expressions
    Kim, Eunyoung, Nam, Hojung · 2022 · Figshare
  9. Additional file 1 of On the robustness of generalization of drug–drug interaction models
    Rogia Kpanou, Mazid Abiodoun Osseni, Prudencio Tossou, François Laviolette, Jacques Corbeil · 2021 · Figshare
  10. ImageMolDDI: A Drug-Drug Interaction Prediction Framework Based on Molecular Images and the Biomedical Knowledge Graph
    Xiang-Zhen Song, Tengfei Ma, Juan Wang, Shang-Jun Yang, Ying Li, Yu-Jiang Cheng · 2025 · IEEE International Conference on Bioinformatics and Biomedicine (BIBM)
  11. Rôle de la GTPase Rho RND1 dans la réponse cellulaire à la camptothécine, inhibiteur de la topoisomérase I
    Laetitia Mouly · 2018 · theses.fr (ABES)
  12. DALI-Syn: integrating chemical LLMs with multi-level attention architectures for synergistic drug combination prediction
    Huanhuan Du, Yayu Tian, Weiguang Wang, Bo Wei, Ting Mei, Hongbo Zhu, Zidan Yang, Xuan He · 2026 · Health Information Science and Systems
  13. ASSDA: Adaptive subgraph sampling with dual-attention for drug-drug interaction prediction
    Hongjie Chen, Qingxiao Guan, Rui Duan · 2026 · Neurocomputing
  14. Methodology for Design and Analysis of Machine Learning Competitions
    Adrien Pavão · 2023 · theses.fr (ABES)
  15. HSSynergy: scale-aware hierarchical attention for interpretable drug synergy prediction
    Yue-Hua Feng, S W Zhang, Xiao-Ying Yan, J. W. Shi · 2026 · Journal of Cheminformatics
  16. CFAN-DDI: Cross-fused attention network for predicting drug-drug interactions
    Shiwei Gao, Yu Zhao, Jingjing Xie, Ruiping Hu · 2026 · Biomedical Signal Processing and Control
  17. Deep Learning-Driven Anticancer Drug Discovery: Emodepside as a Potential Therapeutic Candidate for Triple-Negative Breast Cancer
    Yiyue Xu, Taotao Dong, Butuo Li, Jinming Yu, Linlin Wang · 2026 · Journal of Chemical Information and Modeling
  18. HSAF-DDI: Heterogeneous Semantic-Aware Drug–Drug Interaction Prediction with Hierarchical Adaptive Fusion
    Xiaoli Lin, Siyuan Zhang, Bo Li, Ping Liang, Jun Pang · 2026 · Journal of Chemical Information and Modeling
  19. Beyond Structural Representations: A Semantic-Relational Graph Neural Network for Polypharmacy Side Effect Prediction
    Fatma Zahra Abdeldjouad, Brahami Menaouer · 2026 · Interdisciplinary Sciences Computational Life Sciences
  20. Robust prediction of drug combination side effects in realistic settings
    Ruben Emilio Jimenez Franco, Alberto Paccanaro · 2026 · PLoS Computational Biology