Cited by 208Genetic and Kidney Cyst DiseasesCystic Fibrosis Research AdvancesHereditary Neurological Disorders

Complex interactions between genes controlling trafficking in primary cilia

Open access
Ocbina, Polloneal Jymmiel R, Eggenschwiler, Jonathan T, Moskowitz, Ivan, Anderson, Kathryn V·2011·Nature Genetics

Abstract

Cilia-associated human genetic disorders are striking in the diversity of their abnormalities and their complex inheritance. Inactivation of the retrograde ciliary motor by mutations in DYNC2H1 causes skeletal dysplasias that have strongly variable expressivity. Here we define previously unknown genetic relationships between Dync2h1 and other genes required for ciliary trafficking. Mutations in mouse Dync2h1 disrupt cilia structure, block Sonic hedgehog signaling and cause midgestation lethality. Heterozygosity for Ift172, a gene required for anterograde ciliary trafficking, suppresses cilia phenotypes, Sonic hedgehog signaling defects and early lethality of Dync2h1 homozygotes. Ift122, like Dync2h1, is required for retrograde ciliary trafficking, but reduction of Ift122 gene dosage also suppresses the Dync2h1 phenotype. These genetic interactions illustrate the cell biology underlying ciliopathies and argue that mutations in intraflagellar transport genes cause their phenotypes because of their roles in cilia architecture rather than direct roles in signaling.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1038/ng.832

Cites

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • The neural tube ventralization phenotypes of Tulp3 and IFT-A mutants and Gpr161 mutants are weaker than those resulting from mutations in downstream negative regulators of HH signalling such as Sufu and PKA, suggesting additional inputs into PKA activation other than GPR161.

    “However, the neural tube ventralization phenotypes of Tulp3 and IFT-A mutants, and Gpr161 mutants are weaker than those resulting from mutations in downstream negative regulators of HH signalling such as Sufu and PKA 132, suggesting the existence of additional inputs into PKA activation other than GPR161 133.”

    From Cellular signalling by primary cilia in development, organ function and disease (2019) · cites this paper as [133]

    Split into 2 atoms — 0 confirmed, 1 partially supported, 0 disputed, 0 misattributed, 1 unverifiable. Expand the claim to see per-atom verdicts.

    Experimental — accuracy not yet measured
  • GRK2 and GRK3 transduce high-level SHH signals through mechanisms that do not require GPR161.

    “GRK2 and GRK3 also transduce high level SHH signals through mechanisms independent of GPR161133.”

    From Cellular signalling by primary cilia in development, organ function and disease (2019) · cites this paper as [133]

    The Results section on Dync2h1 and IFT122 reports that Shh signaling can reach high levels in certain double-mutant embryos, but it does not address GRK2, GRK3, or GPR161. Searches for those proteins and for GPR161-independent signaling found no passage supporting the attributed mechanism. Page numbers were not available in our copy. (LLM, conf=0.76)

    Experimental — accuracy not yet measured

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

The citation lists haven’t been fetched yet

References 49 · Cited by 208

Authors
Ocbina, P. J. R., Eggenschwiler, J. T., Moskowitz, I., & Anderson, K. V.
Affiliations
  • Princeton University (US)
  • University of Chicago (US)
Corresponding author
Anderson, Kathryn V
Venue
Nature Genetics
Published
2011-05-08
Volume
43
Issue
6
Pages
547-553
ISSN
  • 1061-4036 (ISSN-L)
  • 1546-1718
OpenAlex
W2007764395
Cited by
208
References
49
Citations by year
2026: 7 · 2025: 11 · 2024: 10 · 2023: 9 · 2022: 11 · 2021: 11 · 2020: 8 · 2019: 10 · 2018: 13 · 2017: 18 · 2016: 18 · 2015: 13 · 2014: 22 · 2013: 14 · 2012: 26
FWCI
13.77
Type
journal article
Language
en
Open access
Locations
  • Nature Genetics (publishedVersion)
  • PubMed (publishedVersion)
  • Europe PMC (PubMed Central) (acceptedVersion)
  • PubMed Central (acceptedVersion)
Funders
  • Memorial Sloan-Kettering Cancer Center
  • National Institutes of Health
  • Directorate for Biological Sciences
  • National Institute of Neurological Disorders and Stroke (R01NS044385)
  • National Institute of Child Health and Human Development
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic and Kidney Cyst Diseases
  • Health Sciences › Medicine › Pulmonary and Respiratory Medicine › Cystic Fibrosis Research Advances
  • Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Hereditary Neurological Disorders
Keywords
primary cilia, ciliary trafficking, DYNC2H1, IFT172, intraflagellar transport, ciliopathies, Sonic hedgehog signaling, skeletal dysplasia, genetic interactions, mouse model
MeSH terms
Animals, Carrier Proteins, Cilia, Cytoskeletal Proteins, Fibroblasts, Mutation, Intracellular Signaling Peptides and Proteins, Adaptor Proteins, Signal Transducing, Mice, Hedgehog Proteins, Cytoplasmic Dyneins

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review