Age distribution of human gene families shows significant roles of both large- and small-scale duplications in vertebrate evolution

Gu, Xun, Wang, Yufeng, Gu, Jianying·2002·Nature Genetics
DOI 10.1038/ng902

Cited by (257)

Items 201–257 of 257

  1. Robustness of Saccharomyces Cerevisiae Genome to Antioxidative Stress
    Ventsislava Yankova Petrova, Anna Vengelova Kujumdzieva · 2010 · Biotechnology & Biotechnological Equipment
  2. Small-Scale Duplications Play a Significant Role in Rice Genome Evolution
    Guo Xin-yi, Xinyi, Xu, HU Wei-min, Zhang, Yang Yang, Hu, Weimin, Junpeng Fan, Longjiang · 2005 · Rice Science
  3. Leucine-rich repeat containing 8A contributes to the expansion of brain ventricles in zebrafish embryos
    Yen-Tzu Tseng, Chun-Lin Ko, Chia-Teng Chang, Yen-Hua Lee, Wei-Chun Huang Fu, I‐Hsuan Liu · 2020 · Biology Open
  4. Evolution of the Zebrafish Genome
    John H. Postlethwait · 2004 · Molecular aspects of fish and marine biology
  5. A comparative genome‐wide analysis of the ABC transporter gene family among three Gossypium species
    Baolu Cui, Yan Li, Yanjie Zhang · 2021 · Crop Science
  6. Modeling the age distribution of gene duplications in vertebrate genome using mixture density
    Zhen Wang, Guohui Ding, Zhonghao Yu, Lei Liu, Yixue Li · 2008 · Genomics
  7. Age distribution patterns of human gene families: divergent for Gene Ontology categories and concordant between different subcellular localizations
    Gangbiao Liu, Yangyun Zou, Qiqun Cheng, Yanwu Zeng, Xun Gu, Zhixi Su · 2013 · Molecular Genetics and Genomics
  8. The Fate of Duplicated Regions of the Atlantic Salmon (Salmo salar) Genome
    Leslie A. Mitchell · 2004 · Summit (Simon Fraser University)
  9. Genomic compartmentalization of gene families encoding core components of metazoan signaling systems
    Howard Wong, Jung Soh, Paul M. K. Gordon, Tom Yu, Christoph Wilhelm Sensen, Edward J. Parr, Randal N. Johnston · 2013 · Genome
  10. EVG, the Remnants of a Primordial Bilaterian’s Synteny of Functionally Unrelated Genes
    Begoña Granadino, Javier Rey-Campos · 2003 · Journal of Molecular Evolution
  11. Large scale gene duplication affected the European eel ( Anguilla anguilla ) after the 3R teleost duplication
    Christoffer Rozenfeld, José Blanca, Víctor Gallego, Victor García‐Carpintero, Juan Germán Herranz-Jusdado, L. Pérez, Juan F. Asturiano, Joaquı́n Cañizares, David S. Peñaranda · 2017 · bioRxiv (Cold Spring Harbor Laboratory)
  12. Polyploid clades tend to be more speciose than their putative sister clades
    Jack W. Oyston, Mark Wilkinson, Marcello Ruta, Matthew Albion Wills · 2022 · Research Square
  13. Genetic manipulation of rod-cone differences in mouse retina
    Ala Morshedian, Zhichun Jiang, Roxana A. Radu, Gordon Fain, Alapakkam P. Sampath · 2024 · PLoS ONE
  14. Gene Duplication and Functional Consequences
    Xun Gu, Yangyun Zou, Zhixi Su · 2012 · Translational bioinformatics
  15. Anciently duplicated genes continuously recruited to heart expression in vertebrate evolution are associated with heart chamber increase
    Yangyun Zou, H. J. Yang, Jingqi Zhou, Gangbiao Liu, Libing Shen, Zhan Mei Zhou, Zhixi Su, Xun Gu · 2024 · Journal of Experimental Zoology Part B Molecular and Developmental Evolution
  16. Gene Duplication and the Origin of Translation Factors
    Galina A. Zhouravleva, Stanislav A. Bondarev · 2011 · InTech eBooks
  17. Duplicated genes and their relevance in the process of speciation
    Till Bayer · 2009 · Kölner Universitäts PublikationsServer (Universität zu Köln)
  18. Statistical analyses and markov modeling of duplication in genome evolution
    Bud Mishra, Yi Zhou · 2005
  19. Evolutionary analysis of the insulin-relaxin gene family from the perspective of gene and genome duplication events.
    Robert Piotr Olinski · 2007 · KTH Publication Database DiVA (KTH Royal Institute of Technology)
  20. Dealing with Duplicated Genomes of Teleosts
    Alan Gilbert Christoffels · 2007 · Wiley eBooks
  21. Functional divergence and genome evolution of vertebrate protein kinases (kinome)
    Jianying Gu · 2003 · Iowa State University Digital Repository (Iowa State University)
  22. Phosphorylation of the Drosophila JNKKK Slipper is essential for proper morphogenesis and heat shock response
    Rebecca L. Gonda · 2011 · D-Scholarship@Pitt (University of Pittsburgh)
  23. Gene Duplication: Evolution
    Wen‐Hsiung Li · 2006 · Wiley eBooks
  24. In silico analysis of C-type lectin domains’ structure and properties
    Alex N. Zelensky · 2004 · ANU Open Research (Australian National University)
  25. Firmes convicciones, frágiles explicaciones
    Máximo Sandín · 2003 · Asclepio
  26. Genomic Analysis of Mitochondrial Carrier Genes in the Bombyx mori
    Jun Wei Cao, Feng Shi · 2012 · Journal of Integrative Agriculture
  27. DETERMINING EXPRESSION, REGULATION AND STOICHIOMETRIES OF CYTOCHROME C OXIDASE SUBUNIT IV PARALOGS IN FISH
    Jared McDonald · 2015 · QSpace (Queen's University Library)
  28. Comparison of the DNA methylation patterns between interspecific Xenopus F1 hybrids and their parental species
    Alie Patrick Koroma · 2010 · UTA ResearchCommons (University of Texas Arlington)
  29. MOLECULAR PHYLOGENETIC ANALYSIS: UNDERSTANDING GENOME EVOLUTION
    Alan Gilbert Christoffels · 2005 · Series on advances in bioinformatics and computational biology
  30. Antimicrobial peptides with therapeutic potential from skin secretions of polyploid frogs of the Pipidae family
    Milena Mechkarska · 2013
  31. Genome evolution after whole genome duplication in the baker's yeast.
    Ryuichi P. Sugino · 2011
  32. Power in numbers : in silico analysis of multigene families in Arabidopsis thaliana
    Jeroen Raes · 2003 · Ghent University Academic Bibliography (Ghent University)
  33. Development of innovative methods for induction of European eel (Anguilla anguilla) spermatogenesis
    Christoffer Rozenfeld · 2019 · RiuNet (Universitat Politècnica de València)
  34. Cooperation and Competition in Mammalian Evolution
    Tomoko Kaneko‐Ishino, Fumitoshi Ishino · 2019 · Springer eBooks
  35. Evolution of Human Multigene Families
    Fatima Batool, Nashaiman Pervaiz, Qanta Khalid, Amir Ali Abbasi · 2021 · Wiley eBooks
  36. References
    2004 · New comprehensive biochemistry
  37. References
    Cecilia Saccone, Graziano Pesole · 2003 · Wiley eBooks
  38. Duplication
    2004 · Wiley eBooks
  39. Gene Duplication: Evolution
    Wen‐Hsiung Li · 2007 · Wiley eBooks
  40. Functional Divergence after Gene Duplication
    Xun Gu · 2024 · Oxford University Press eBooks
  41. Evolutionary Distance Analysis in Molecular Evolution
    Xun Gu · 2024 · Oxford University Press eBooks
  42. Implications of gen(om)e duplications on the expansion and evolution of the GPCR signalling pathway
    Ana M. C. Barradas, Waldan K. Kwong · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  43. The Primate Major Histocompatibility Complex: A Case Study of Gene Family Evolution
    Alyssa Lyn Fortier, Jonathan K. Pritchard · 2025 · eLife
  44. DIVERGE v4: A Platform for Large-Scale Analysis of Functional Divergence Across Multi-Gene Families
    Yichang Chen, Xiaobin Xu, Yi Pan, Siqi Wang, Wenyi Zhao, Binbin Zhou, Jingqi Zhou, Yichun Zheng, Zhan Mei Zhou, Xun Gu · 2025 · Molecular Biology and Evolution
  45. A Model for the Diversity Explosion Fundamental to Metastasis
    Edward Tim O’Brien · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
  46. Computational studies with ESTs: assembly, SNP detection, and applications in alternative splicing
    Jianmin Wang · 2006
  47. Additional file 4 of Representativeness of microsatellite distributions in genomes, as revealed by 454 GS-FLX Titanium pyrosequencing
    Jean‐François Martin, Nicolas Pech, Emese Meglécz, Ferreira, Stéphanie, Caroline Costedoat, Vincent Dubut, Thibaut Malausa, André Gilles · 2021 · Figshare
  48. Additional file 7 of Representativeness of microsatellite distributions in genomes, as revealed by 454 GS-FLX Titanium pyrosequencing
    Jean‐François Martin, Nicolas Pech, Emese Meglécz, Ferreira, Stéphanie, Caroline Costedoat, Vincent Dubut, Thibaut Malausa, André Gilles · 2021 · Figshare
  49. Additional file 2 of Representativeness of microsatellite distributions in genomes, as revealed by 454 GS-FLX Titanium pyrosequencing
    Jean‐François Martin, Nicolas Pech, Emese Meglécz, Ferreira, Stéphanie, Caroline Costedoat, Vincent Dubut, Thibaut Malausa, André Gilles · 2021 · Figshare
  50. Additional file of Representativeness of microsatellite distributions in genomes, as revealed by 454 GS-FLX Titanium pyrosequencing
    Jean‐François Martin, Nicolas Pech, Emese Meglécz, Ferreira, Stéphanie, Caroline Costedoat, Vincent Dubut, Thibaut Malausa, André Gilles · 2021 · Figshare
  51. Additional file 8 of Representativeness of microsatellite distributions in genomes, as revealed by 454 GS-FLX Titanium pyrosequencing
    Jean‐François Martin, Nicolas Pech, Emese Meglécz, Ferreira, Stéphanie, Caroline Costedoat, Vincent Dubut, Thibaut Malausa, André Gilles · 2021 · Figshare
  52. Additional file 1 of Systematic analysis and expression of Gossypium 2ODD superfamily highlight the roles of GhLDOXs responding to alkali and other abiotic stress in cotton
    Tiantian Jiang, Aihua Cui, Cui, Yupeng, Ruifeng Cui, Mingge Han, Zhang, Yuexin, Yapeng Fan, Huang, Hui, Xixian Feng, Yuqian Lei et al. · 2024 · Figshare
  53. Additional file 3 of Representativeness of microsatellite distributions in genomes, as revealed by 454 GS-FLX Titanium pyrosequencing
    Jean‐François Martin, Nicolas Pech, Emese Meglécz, Ferreira, Stéphanie, Caroline Costedoat, Vincent Dubut, Thibaut Malausa, André Gilles · 2021 · Figshare
  54. Additional file 1 of Representativeness of microsatellite distributions in genomes, as revealed by 454 GS-FLX Titanium pyrosequencing
    Jean‐François Martin, Nicolas Pech, Emese Meglécz, Ferreira, Stéphanie, Caroline Costedoat, Vincent Dubut, Thibaut Malausa, André Gilles · 2021 · Figshare
  55. Additional file 6 of Representativeness of microsatellite distributions in genomes, as revealed by 454 GS-FLX Titanium pyrosequencing
    Jean‐François Martin, Nicolas Pech, Emese Meglécz, Ferreira, Stéphanie, Caroline Costedoat, Vincent Dubut, Thibaut Malausa, André Gilles · 2021 · Figshare
  56. Additional file 9 of Representativeness of microsatellite distributions in genomes, as revealed by 454 GS-FLX Titanium pyrosequencing
    Jean‐François Martin, Nicolas Pech, Emese Meglécz, Ferreira, Stéphanie, Caroline Costedoat, Vincent Dubut, Thibaut Malausa, André Gilles · 2021 · Figshare
  57. Statistical analysis of gene expression profiles
    Zhongqi Zhang · 2004