Selected reaction monitoring–based proteomics: workflows, potential, pitfalls and future directions

Picotti, Paola, Aebersold, Ruedi·2012·Nature Methods

Cited by (1,000)

Items 401–500 of 1,000

  1. Identification of Organ-Enriched Protein Biomarkers of Acute Liver Injury by Targeted Quantitative Proteomics of Blood in Acetaminophen- and Carbon-Tetrachloride-Treated Mouse Models and Acetaminophen Overdose Patients
    Shizhen Qin, Yong Feng Zhou, Li Gray, Ulrike Kusebauch, Laurence McEvoy, Daniel James Antoine, Lucy Hampson, Kevin B. Park, David S Campbell, Juan Caballero-Pérez et al. · 2016 · Journal of Proteome Research
  2. Identification of Novel Biomarkers of Brain Damage in Patients with Hemorrhagic Stroke by Integrating Bioinformatics and Mass Spectrometry-Based Proteomics
    Eduardo Martínez‐Morillo, Pablo García Hernández, Ilijana Begcevic, Hari Kosanam, Belén Prieto García, Francisco Vicente Álvarez Menéndez, Eleftherios P. Diamandis · 2013 · Journal of Proteome Research
  3. Identification of Post-Translational Modifications by Mass Spectrometry
    Armand G. Ngounou Wetie, Izabela Sokolowska, Alisa G. Woods, Costel C. Darie · 2013 · Australian Journal of Chemistry
  4. Quantitation of endogenous peptides using mass spectrometry based methods
    Elena V. Romanova, Sarah E. Dowd, Jonathan V. Sweedler · 2013 · Current Opinion in Chemical Biology
  5. Protein species as diagnostic markers
    Pascal Steffen, Marcel Kwiatkowski, Wesley D. Robertson, Arash Zarrine‐Afsar, D. Deterra, Verena Richter, Hartmut Schlüter · 2015 · Journal of Proteomics
  6. Intact Cell MALDI-TOF MS on Sperm: A Molecular Test For Male Fertility Diagnosis
    Laura Soler, Valérie Labas, Aurore Thélie, Isabelle Grasseau, Ana‐Paula Teixeira‐Gomes, Élisabeth Blesbois · 2016 · Molecular & Cellular Proteomics
  7. Negative Autogenous Control of the Master Type III Secretion System Regulator HrpL inPseudomonas syringae
    Christopher Waite, Jörg Schumacher, Milija Jovanovic, Mark H. Bennett, Martin Buck · 2017 · mBio
  8. Targeted mass spectrometry analysis of the proteins IGF1, IGF2, IBP2, IBP3 and A2GL by blood protein precipitation
    Gerard Such-Sanmartín, Nicolai Bache, Anne K. Callesen, Adelina Rogowska-Wrzesińska, Ole Nørregaard Jensen · 2014 · Journal of Proteomics
  9. The Contribution of Mass Spectrometry-Based Proteomics to Understanding Epigenetics
    Roberta Noberini, Gianluca Sigismondo, Tiziana Bonaldi · 2015 · Epigenomics
  10. Systems proteomics approaches to study bacterial pathogens: application to Mycobacterium tuberculosis
    Amir Banaei‐Esfahani, Charlotte Nicod, Ruedi H. Aebersold, Ben C. Collins · 2017 · Current Opinion in Microbiology
  11. Rapid Detection of Abrin Toxin and Its Isoforms in Complex Matrices by Immuno-Extraction and Quantitative High Resolution Targeted Mass Spectrometry
    Eva-Maria Hansbauer, Sylvia Worbs, Hervé Volland, Stéphanie Simon, Christophe Junot, François Fenaille, Brigitte Gertrud Dorner, François Bécher · 2017 · Analytical Chemistry
  12. Abundance of bacterial Type VI secretion system components measured by targeted proteomics
    Lin Lin, Emmanuelle Lezan, Alexander Schmidt, Marek Basler · 2019 · Nature Communications
  13. Unraveling the Composition of Insecticidal Crystal Proteins in Bacillus thuringiensis: a Proteomics Approach
    Javier Caballero, Nerea Jiménez‐Moreno, Irene Orera, Trevor Williams, Ana Beatriz Fernández, Maite Villanueva, Juan Ferré, Primitivo Caballero, Carmen Ancín‐Azpilicueta · 2020 · Applied and Environmental Microbiology
  14. Flavonoid biosynthetic and starch and sucrose metabolic pathways are involved in the pigmentation of naturally brown-colored cotton fibers
    Zhen Peng, Qiong Gao, Cheng Yu Luo, Wenfang Gong, Shouwu Tang, Xiaomeng Zhang, Song Wu, Zhenzhen Wang, Hailiang Liu, Xiongming Du et al. · 2020 · Industrial Crops and Products
  15. Recent advances in proteome‐wide label‐free target deconvolution for bioactive small molecules
    Jichao Sun, Nayana Prabhu, Jun Tang, Fan Yang, Lin Jia, Jinan Guo, Kefeng Xiao, Wai Leong Tam, Pär Nordlund, Lingyun Dai · 2021 · Medicinal Research Reviews
  16. Selected Reaction Monitoring to Differentiate and Relatively Quantitate Isomers of Sulfated and Unsulfated Core 1 O-Glycans from Salivary MUC7 Protein in Rheumatoid Arthritis
    Sarah A. Flowers, Liaqat Ali, Catherine S. Lane, Magnus Olin, Niclas G. Karlsson · 2013 · Molecular & Cellular Proteomics
  17. Urinary Kininogen-1 and Retinol binding protein-4 respond to Acute Kidney Injury: predictors of patient prognosis?
    Laura Gonzalez‐Calero, Marta Martin‐Lorenzo, María A. Ramos-Barron, Jorge Ruiz-Criado, Aroa S. Maroto, Alberto Ortíz, Carlos Gómez-Alamillo, Manuel Arias, Fernando Vivanco, Gloria Álvarez‐Llamas · 2016 · Scientific Reports
  18. Proteomic and Mass Spectrometry Technologies for Biomarker Discovery
    Andrei P. Drabovich, Maria P. Pavlou, Ihor Batruch, Eleftherios P. Diamandis · 2013 · Elsevier eBooks
  19. Targeted Proteomics Enables Simultaneous Quantification of Folate Receptor Isoforms and Potential Isoform-based Diagnosis in Breast Cancer
    Ting Yang, Feifei Xu, Danjun Fang, Yun Chen · 2015 · Scientific Reports
  20. A Standardized Kit for Automated Quantitative Assessment of Candidate Protein Biomarkers in Human Plasma
    Andrew J. Percy, Yassene Mohammed, Juncong Yang, Christoph H. Borchers · 2015 · Bioanalysis
  21. Self-packed core shell nano liquid chromatography columns and silica-based monolithic trap columns for targeted proteomics
    Henriette Sjaanes Berg, Kristina Erikstad Seterdal, Tone Smetop, Rūdolfs Rozenvalds, Ole Kristian Brandtzaeg, Tore Sandnes Vehus, Elsa Lundanes, Steven Ray Wilson · 2017 · Journal of Chromatography A
  22. MSstatsQC: Longitudinal System Suitability Monitoring and Quality Control for Targeted Proteomic Experiments
    Eralp Doğu, Sara Mohammad-Taheri, Susan E. Abbatiello, Michael S. Bereman, Brendan MacLean, Birgit Schilling, Olga Vitek A · 2017 · Molecular & Cellular Proteomics
  23. Learning from quantitative data to understand central carbon metabolism
    Fumio Matsuda, Yoshihiro Toya, Hiroshi Shimizu · 2017 · Biotechnology Advances
  24. Insights into the role of androgen receptor in human testicular peritubular cells
    Christine A. Mayer, M. Adam, Lena Walenta, Nina Schmid, Hanna Heikelä, Kerstin Schubert, Florian Flenkenthaler, Kim-Gwendolyn Dietrich, S. Gruschka, Georg Josef Arnold et al. · 2018 · Andrology
  25. Discovery of biomarker candidates associated with the risk of short-term and mid/long-term relapse after infliximab withdrawal in Crohn’s patients: a proteomics-based study
    Nicolas Pierre, Dominique Baiwir, Vân Anh Huynh‐Thu, Gabriel Mazzucchelli, Nicolas Smargiasso, Edwin De Pauw, Yoram Bouhnik, David Laharie, Jean‐Frédéric Colombel, Marie‐Alice Meuwis et al. · 2020 · Gut
  26. Comparison of Unit Resolution Versus High-Resolution Accurate Mass for Parallel Reaction Monitoring
    Lilian R. Heil, Philip M. Remes, Michael J. MacCoss · 2021 · Journal of Proteome Research
  27. Identification and Quantitation of Bioactive and Taste-Related Dipeptides in Low-Salt Dry-Cured Ham
    Alejandro Heres, Marta Gallego, Leticia Mora, Fidel Toldrá · 2022 · International Journal of Molecular Sciences
  28. The addition of FAIMS increases targeted proteomics sensitivity from FFPE tumor biopsies
    Steve M. M. Sweet, David C. Chain, Wen Yu, Philip Martin, Marlon Cezar Rebelatto, Andrew G. Chambers, Fabiola Cecchi, Yeoun Jin Kim · 2022 · Scientific Reports
  29. Stressor-induced proteome alterations in zebrafish: A meta-analysis of response patterns
    Ksenia J. Groh, Marc J.‐F. Suter · 2014 · Aquatic Toxicology
  30. Proteomic applications in food allergy
    Francesco Di Girolamo, Maurizio Muraca, Oscar Mazzina, Isabella Lante, Lamia Dahdah · 2015 · Current Opinion in Allergy and Clinical Immunology
  31. Differential secretome analysis of Pseudomonas syringae pv tomato using gel-free MS proteomics
    Jörg Schumacher, Christopher Waite, Mark H. Bennett, Marcos Francisco Perez, Kishwar Jahan Shethi, Martin Buck · 2014 · Frontiers in Plant Science
  32. Cerebrospinal fluid analysis in Alzheimer’s disease: technical issues and future developments
    Simone Lista, Henrik Zetterberg, Bruno Dubois, Kaj Blennow, Harald Juergen Hampel · 2014 · Journal of Neurology
  33. Manipulating trypsin digestion conditions to accelerate proteolysis and simplify digestion workflows in development of protein mass spectrometric assays for the clinical laboratory
    Yu Zi Zheng, Mari L. DeMarco · 2017 · Clinical mass spectrometry
  34. THE PRESENT AND FUTURE OF THE MASS SPECTROMETRY-BASED INVESTIGATION OF THE EXOSOME LANDSCAPE.
    Lian Xu, R. Gimple, W. Lau, Bonnie Lau, Fan Fei, Qiuhong Shen, X. Liao, Yichen Li, Wei Wang, Ying He et al. · 2020 · Mass spectrometry reviews (Print)
  35. Mapping the Secretome of Dental Pulp Stem Cells Under Variable Microenvironmental Conditions
    Maria Bousnaki, Athina Bakopoulou, Andreas Pich, Eleni Papachristou, Aristeidis Κritis, Petros T Koidis · 2021 · Stem Cell Reviews and Reports
  36. The CDK1-TOPBP1-PLK1 axis regulates the Bloom’s syndrome helicase BLM to suppress crossover recombination in somatic cells
    Chiara Balbo Pogliano, Ilaria Ceppi, Sara Giovannini, Vasiliki Petroulaki, Nathan Palmer, Federico Uliana, Marco Gatti, Kristina Kasaciunaite, Raimundo Freire, Ralf Seidel et al. · 2022 · Science Advances
  37. Immunological Techniques to Assess Protein Thiol Redox State: Opportunities, Challenges and Solutions
    James Nathan Cobley, Holger Husi · 2020 · Antioxidants
  38. Selection of Features with Consistent Profiles Improves Relative Protein Quantification in Mass Spectrometry Experiments
    Tsai, Tsung-Heng, Choi, Meena, Banfai, Balazs, Liu, Yansheng, MacLean, Brendan X., Dunkley, Tom, Vitek, Olga · 2020 · Molecular & Cellular Proteomics
  39. Challenges of MS‐based small extracellular vesicles proteomics
    Daniel Fochtman, Łukasz Marczak, Monika Pietrowska, Anna Wojakowska · 2024 · Journal of Extracellular Vesicles
  40. Gene expression and protein abundance: Just how associated are these molecular traits?
    Anahita Samih, Maurício Alexander de Moura Ferreira, Zoran Nikoloski · 2025 · Biotechnology Advances
  41. Capillary zone electrophoresis-electrospray ionization-tandem mass spectrometry for quantitative parallel reaction monitoring of peptide abundance and single-shot proteomic analysis of a human cell line
    Liangliang Sun, Guijie Zhu, Si Mou, Yimeng Zhao, Matthew M. Champion, Norman J. Dovic̀hi · 2014 · Journal of Chromatography A
  42. Mass Spectrometry-Based Proteomics for the Analysis of Chromatin Structure and Dynamics
    Monica Soldi, Alessandro Cuomo, Michael Bremang, Tiziana Bonaldi · 2013 · International Journal of Molecular Sciences
  43. Capillary zone electrophoresis-multiple reaction monitoring from 100 pg of RAW 264.7 cell lysate digest
    Liangliang Sun, Yihan Li, Matthew M. Champion, Guijie Zhu, Roza Wojcik, Norman J. Dovic̀hi · 2013 · The Analyst
  44. Development of a Quantitative SRM-Based Proteomics Method to Study Iron Metabolism of Synechocystis sp. PCC 6803
    Linda Vuorijoki, Janne Isojärvi, Pauli Kallio, Petri Kouvonen, Eva–Mari Aro, Garry L. Corthals, Patrik Raymond Jones, Dorota Muth‐Pawlak · 2015 · Journal of Proteome Research
  45. Proteomic profiling of mitochondria: what does it tell us about the ageing brain?
    Thomas L. Ingram, Lisa Chakrabarti · 2016 · Aging
  46. Development and application of a HPLC-MS/MS method for quantitation of fucosylated chondroitin sulfate and fucoidan in sea cucumbers
    Zhenjun Zhu, Beiwei Zhu, Chunqing Ai, Jiaojiao Lu, Sufeng Wu, Yili Liu, Linlin Wang, Jingfeng Yang, Shuang Song, Xiaoling Liu · 2018 · Carbohydrate Research
  47. Novel high–throughput myofibroblast assays identify agonists with therapeutic potential in pulmonary fibrosis that act via EP2 and EP4 receptors
    Patrick Sieber, Anny Schäfer, Raphael Lieberherr, François Le Goff, Manuel Stritt, Richard W.D. Welford, John Gatfield, Oliver Peter, Oliver Nayler, Urs Lüthi · 2018 · PLoS ONE
  48. Are we forgetting the “proteomics” in multi-omics ecotoxicology?
    Xuefang Liang, Christopher Joseph Martyniuk, Denina Bobbie Dawn Simmons · 2020 · Comparative Biochemistry and Physiology Part D Genomics and Proteomics
  49. Multiple Reaction Monitoring Mass Spectrometry for the Discovery and Quantification of O-GlcNAc-Modified Proteins
    Julien Jean Pierre Maury, Daniel Ng, Xuezhi Bi, Muriel Bardor, Andre B.H. Choo · 2013 · Analytical Chemistry
  50. Effects of AVX-470, an Oral, Locally Acting Anti-Tumour Necrosis Factor Antibody, on Tissue Biomarkers in Patients with Active Ulcerative Colitis
    Deborah S. Hartman, Daniel E. Tracey, Brenda R. Lemos, Emma C. Erlich, Randall E. Burton, David M. Keane, Rutvij Patel, Skaison Kim, Kailash C. Bhol, M. Scott Harris et al. · 2016 · Journal of Crohn s and Colitis
  51. Selected reaction monitoring mass spectrometry of mastitis milk reveals pathogen-specific regulation of bovine host response proteins
    Ulrike Kusebauch, Lorenzo E. Hernández-Castellano, Stine L. Bislev, Robert L. Moritz, Christine Maria Røntved, Emöke Bendixen · 2018 · Journal of Dairy Science
  52. Non-Thermal Processing Technologies for Allergen Control in Alternative Protein Sources for Food Industry Applications
    Gaoya Dong, Laura M. Hinds, Arturo B. Soro, Zhipeng Hu, Da‐Wen Sun, Brijesh Kumar Tiwari · 2024 · Food Engineering Reviews
  53. High Resolution Parallel Reaction Monitoring with Electron Transfer Dissociation for Middle-Down Proteomics
    Michael J. Sweredoski, Annie Moradian, Matthias Raedle, Catarina de Matos Ferraz Franco, Sonja Y. Hess · 2015 · Analytical Chemistry
  54. Proteomics and drug discovery in cancer
    Matheus Henrique Dias, Eduardo S. Kitano, André Zelanis, Leo Kei Iwai · 2015 · Drug Discovery Today
  55. Development of a targeted selected ion monitoring assay for the elucidation of protease induced structural changes in cardiac troponin T
    Alexander S. Streng, Douwe de Boer, Freek G. Bouwman, Edwin C.M. Mariman, Arjen Scholten, Marja P. van Dieijen‐Visser, Will K. W. H. Wodzig · 2016 · Journal of Proteomics
  56. Urinary alpha-1 antitrypsin and CD59 glycoprotein predict albuminuria development in hypertensive patients under chronic renin-angiotensin system suppression
    Laura Gonzalez‐Calero, Marta Martin‐Lorenzo, Fernando de la Cuesta, Aroa S. Maroto, Montserrat Baldan Martin, Gema Ruiz‐Hurtado, Helena Pulido-Olmo, J. Segura, María G. Barderas, Luis Miguel Ruilope et al. · 2016 · Cardiovascular Diabetology
  57. Impact of Sample Matrix on Accuracy of Peptide Quantification: Assessment of Calibrator and Internal Standard Selection and Method Validation
    Samuel L.M. Arnold, Faith Stevison, Nina Isoherranen · 2015 · Analytical Chemistry
  58. Annexin A5 is the Most Abundant Membrane-Associated Protein in Stereocilia but is Dispensable for Hair-Bundle Development and Function
    Jocelyn F. Krey, Meghan C. Drummond, Sarah Foster, Edward V. Porsov, Sarath Vijayakumar, Dongseok Choi, Karen H. Friderici, Sherri M. Jones, Alfred L. Nuttall, Peter G. Gillespie · 2016 · Scientific Reports
  59. One-Pot Two-Nanoprobe Assay Uncovers Targeted Glycoprotein Biosignature
    Mira Anne C. dela Rosa, Wei‐Chun Chen, Yi‐Ju Chen, Rofeamor P. Obena, Chih‐Hsiang Chang, Rey Yonson Capangpangan, Tung‐Hung Su, Pei‐Jer Chen, Pei‐Jer Chen, Yu‐Ju Chen · 2017 · Analytical Chemistry
  60. Quality assessment and interference detection in targeted mass spectrometry data using machine learning
    Shadi Toghi Eshghi, Paul Auger, W. Rodney Mathews · 2018 · Clinical Proteomics
  61. Identification of peptide biomarkers for authentication of Atlantic salmon and rainbow trout with untargeted and targeted proteomics approaches and quantitative detection of adulteration
    Shuqing Gu, Xiaojun Deng, Yiyin Shi, Yichun Cai, Yihui Huo, Dehua Guo, Fang Han · 2020 · Journal of Chromatography B
  62. Domestic animal proteomics in the 21st century: A global retrospective and viewpoint analysis
    André Martinho de Almeida, Syed Azmal Ali, Fabrizio Ceciliani, P.D. Eckersall, Lorenzo E. Hernández-Castellano, Rongwei Han, Jaka Jakob Hodnik, Shalini Jaswal, John D. Lippolis, Marκ McLaughlin et al. · 2021 · Journal of Proteomics
  63. Novel perspectives of environmental proteomics
    Huiying Guo, Lili Wang, Ying Deng, Jinshao Ye · 2021 · The Science of The Total Environment
  64. Protein interaction networks in innate immunity
    Manuele Rebsamen, Richard K. Kandasamy, Giulio Superti‐Furga · 2013 · Trends in Immunology
  65. Amyloid-β as a biomarker for Alzheimer’s disease: quantification methods in body fluids
    Sara Galozzi, Katrin Marcus, Katalin Barkovits · 2015 · Expert Review of Proteomics
  66. Neucode Labels for Multiplexed, Absolute Protein Quantification
    Gregory K. Potts, Emily A. Voigt, Derek J. Bailey, Christopher M. Rose, Michael S. Westphall, Alexander S. Hebert, John Yin, Joshua J. Coon · 2016 · Analytical Chemistry
  67. Targeted Mass Spectrometry-Based Assays for Relative Quantification of 30 Brain-Related Proteins and Their Clinical Applications
    Ilijana Begcevic, Davor Brinc, Lora Dukić, Ana-Maria Šimundić, Iris Zavoreo, Vanja Bašić Kes, Eduardo Martínez‐Morillo, Ihor Batruch, Andrei P. Drabovich, Eleftherios P. Diamandis · 2018 · Journal of Proteome Research
  68. Elevated urine histone 4 levels in women with ovarian endometriosis revealed by discovery and parallel reaction monitoring proteomics
    Xin Chen, Haiyuan Liu, Wei Sun, Zhengguang Guo, Jinghe Lang · 2019 · Journal of Proteomics
  69. SWATH Based Quantitative Proteomics Reveals Significant Lipid Metabolism in Early Myopic Guinea Pig Retina
    Jingfang Bian, Ying Hon Sze, Dennis Y. Tse, Chi Ho To, Sally A. McFadden, Carly Siu Yin Lam, King Kit Li, Thomas Chuen Lam · 2021 · International Journal of Molecular Sciences
  70. Label-free target protein characterization for small molecule drugs: recent advances in methods and applications
    Fei Feng, Weiyue Zhang, Yifeng Chai, Dandan Guo, Xiaofei Chen · 2022 · Journal of Pharmaceutical and Biomedical Analysis
  71. Discovery of nutritional biomarkers: future directions based on omics technologies
    Leticia Odriozola, Fernando José Corrales · 2015 · International Journal of Food Sciences and Nutrition
  72. Application of proteomics technology in adipocyte biology
    Johan Renes, Edwin C.M. Mariman · 2013 · Molecular BioSystems
  73. Proteomic strategies to unravel age-related redox signalling defects in skeletal muscle
    James Nathan Cobley, Giorgos Konstantinos Sakellariou, Holger Husi, Brian McDonagh · 2018 · Free Radical Biology and Medicine
  74. Quantitative Measurement of Immunoglobulins and Free Light Chains Using Mass Spectrometry
    Martijn M. VanDuijn, Joannes F.M. Jacobs, Ron A. Wevers, Udo F. H. Engelke, Irma Joosten, Theo M. Luider · 2015 · Analytical Chemistry
  75. Optimized Sample Preparation and Data Processing of Data-Independent Acquisition Methods for the Robust Quantification of Trace-Level Host Cell Protein Impurities in Antibody Drug Products
    Nicolas Pythoud, Joanna Bons, Geoffroy Mijola, Alain Beck, Sarah Cianférani, Christine Carapito · 2020 · Journal of Proteome Research
  76. PRM-LIVE with Trapped Ion Mobility Spectrometry and Its Application in Selectivity Profiling of Kinase Inhibitors
    He Zhu, Scott B. Ficarro, William Max Alexander, Laura E. Fleming, Guillaume Adelmant, Tinghu Zhang, Matthew Willetts, Jens Decker, Sven Brehmer, Michael Krause et al. · 2021 · Analytical Chemistry
  77. Challenges and opportunities in mass spectrometric analysis of proteins from dried blood spots
    Nicholas J Martin, Helen J. Cooper · 2014 · Expert Review of Proteomics
  78. Clinical perspectives of dried blood spot protein quantification using mass spectrometry methods
    Sylvain Lehmann, Alexia Picas, Laurent Tiers, Jérôme Vialaret, Christophe Hirtz · 2017 · Critical Reviews in Clinical Laboratory Sciences
  79. Discovery of plasma biomarkers for predicting the severity of coronary artery atherosclerosis by quantitative proteomics
    Eu Jeong Ku, Kyung-Cho Cho, Cheong Lim, Jeong Won Kang, Jaewon Oh, Yu Ri Choi, Jong‐Moon Park, Na‐Young Han, Jong Jin Oh, Tae Jung Oh et al. · 2020 · BMJ Open Diabetes Research & Care
  80. Proteomic Applications in Aquatic Environment Studies
    Nadeeka Thushari Gajahin Gamage, RINA MIYASHITA, Kazutaka Takahashi, Shuichi Asakawa, Jayan Duminda M Senevirathna · 2022 · Proteomes
  81. Critical review of new advances in food and plant proteomics analyses by nano-LC/MS towards advanced foodomics
    Cemil Aydoğan · 2024 · TrAC Trends in Analytical Chemistry
  82. Discovery and Targeted Proteomics on Cutaneous Biopsies Infected by Borrelia to Investigate Lyme Disease*
    Gilles Schnell, Amandine Bœuf, Benoît Westermann, B. Jaulhac, Dan M. Lipsker, Christine Carapito, Nathalie Boulanger, Laurence Ehret‐Sabatier · 2015 · Molecular & Cellular Proteomics
  83. Analytical platform evaluation for quantification of ERG in prostate cancer using protein and mRNA detection methods
    Jintang He, Athena Schepmoes, Tujin Shi, Chaochao Wu, Thomas Fillmore, Yuqian Gao, Richard D. Smith, Weijun Qian, Karin Rodland, Tao Liu et al. · 2015 · Journal of Translational Medicine
  84. Mass Spectrometry-Based Analysis for the Discovery and Validation of Potential Colorectal Cancer Stool Biomarkers
    Ching‐Seng Ang, Mark S. Baker, Edouard Collins Nice · 2017 · Methods in enzymology on CD-ROM/Methods in enzymology
  85. GlnK Facilitates the Dynamic Regulation of Bacterial Nitrogen Assimilation
    Adam Gosztolai, Jörg Schumacher, Volker Behrends, Jacob Guy Bundy, Franziska M. Heydenreich, Mark H. Bennett, Martin Buck, Mauricio Barahona · 2017 · Biophysical Journal
  86. Streptococcus pyogenes Infection and the Human Proteome with a Special Focus on the Immunoglobulin G-cleaving Enzyme IdeS
    Christofer A. Q. Karlsson, Sofia Järnum, Lena Winstedt, Christian Kjellman, Lars Björck, Adam Linder, Johan A. Malmström · 2018 · Molecular & Cellular Proteomics
  87. Integrating Discovery-driven Proteomics and Selected Reaction Monitoring To Develop a Noninvasive Assay for Geoduck Reproductive Maturation
    Emma Timmins‐Schiffman, Grace A. Crandall, Brent Vadopalas, Michael E. Riffle, Brook L. Nunn, Steven Roberts · 2017 · Journal of Proteome Research
  88. Global discovery of protein kinases and other nucleotide‐binding proteins by mass spectrometry
    Yongsheng Xiao, Yinsheng Wang · 2014 · Mass Spectrometry Reviews
  89. Candidate Serum Biomarkers for Early Intestinal Cancer Using 15N Metabolic Labeling and Quantitative Proteomics in the ApcMin/+ Mouse
    Melanie M. Ivancic, Edward L. Huttlin, Xiaodi F. Chen, Jennifer K. Pleiman, Amy A. Irving, Adrian D. Hegeman, William F. Dove, Michael R. Sussman · 2013 · Journal of Proteome Research
  90. Application of selected reaction monitoring mass spectrometry to field-grown crop plants to allow dissection of the molecular mechanisms of abiotic stress tolerance
    Richard P. Jacoby, A. Harvey Millar, Nicolas L. Taylor · 2013 · Frontiers in Plant Science
  91. Multiplexed Quantification of Plant Thylakoid Proteins on Western Blots Using Lanthanide-Labeled Antibodies and Laser Ablation Inductively Coupled Plasma Mass Spectrometry (LA-ICP-MS)
    Thomas C. de Bang, Pai Pedas, Jan Kofod Schjoerring, Poul Erik Jensen, Steen Husted · 2013 · Analytical Chemistry
  92. Protein Molecular Data from Ancient (>1 million years old) Fossil Material: Pitfalls, Possibilities and Grand Challenges
    Mary Higby Schweitzer, Elena Rita Schroeter, Michael B. Goshe · 2014 · Analytical Chemistry
  93. Quantification of angiotensin II-regulated proteins in urine of patients with polycystic and other chronic kidney diseases by selected reaction monitoring
    Ana Konvalinka, Ihor Batruch, Tomáš Tokár, Apostolos Dimitromanolakis, Shelby Reid, Xuewen Song, York Pei, Andrei P. Drabovich, Eleftherios P. Diamandis, Igor Jurišica et al. · 2016 · Clinical Proteomics
  94. Mitochondrial Proteome Studies in Seeds during Germination
    Małgorzata Czarna, Marta Kołodziejczak, Hanna Jańska · 2016 · Proteomes
  95. Integrative metabolomics as emerging tool to study autophagy regulation
    Sarah Stryeck, Ruth Birner‐Gruenberger, Tobias Madl · 2017 · Microbial Cell
  96. Proteomic studies of cerebrospinal fluid biomarkers of Alzheimer’s disease: an update
    Erik Portelius, Gunnar Brinkmalm, Josef Pannee, Henrik Zetterberg, Kaj Blennow, Rahil Dahlén, Ann Brinkmalm, Johan Gobom · 2017 · Expert Review of Proteomics
  97. A Multiplexed Mass Spectrometry-Based Assay for Robust Quantification of Phosphosignaling in Response to DNA Damage
    Jeffrey R. Whiteaker, Lei Zhao, Rick Saul, Jan A. Kaczmarczyk, Regine M. Schoenherr, Heather D. Moore, Corey Winston Jones-Weinert, Richard G. Ivey, Chenwei Lin, Tara Hiltke et al. · 2018 · Radiation Research
  98. Depletion of nuclear histone H2A variants is associated with chronic DNA damage signaling upon drug-evoked senescence of human somatic cells
    Mary F. Lopez, James R. Tollervey, Bryan Krastins, Alejandra Garces, David A. Sarracino, Amol Prakash, Maryann S. Vogelsang, Glenn J. Geesman, Augusto Valderrama-Aguirre, I. King Jordan et al. · 2012 · Aging
  99. Presence of Histatin-1 in Human Tears and Association with Aqueous Deficient Dry Eye Diagnosis: A Preliminary Study
    Sushma Kalmodia, Kyung‐No Son, Dingcai Cao, Bao‐Shiang Lee, Bayasgalan Surenkhuu, Dhara Shah, Marwan Ali, Arun Balasubramaniam, Sandeep K Jain, Vinay Kumar Aakalu · 2019 · Scientific Reports
  100. Targeted Proteomics Identifies Paraoxonase/Arylesterase 1 (PON1) and Apolipoprotein Cs as Potential Risk Factors for Hypoalphalipoproteinemia in Diabetic Subjects Treated with Fenofibrate and Rosiglitazone
    Graziella E. Ronsein, Gissette Reyes‐Soffer, Yi He, Michael N. Oda, Henry N. Ginsberg, Jay W. Heinecke · 2015 · Molecular & Cellular Proteomics