Detection of histone modifications at specific gene loci in single cells in histological sections

Gomez, Delphine, Shankman, Laura S, Nguyen, Anh T, Owens, Gary K·2013·Nature Methods
DOI 10.1038/nmeth.2332

Cited by (253)

Items 201–253 of 253

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    Максимова Варвара Павловна, Polina Bugaeva, Жидкова Екатерина Михайловна, Olga Usalka, Ekaterina A. Lesovaya, Gennady A. Belitsky, Якубовская Марианна Геннадиевна, Кирсанов Кирилл Игоревич · 2019 · Advances in molecular oncology
  2. "Smooth muscle cell-specific deletion of Col15a1 unexpectedly leads to impaired development of advanced atherosclerotic lesions"
    Brittany G. Durgin · 2017
  3. Macrophage efferocytosis is controlled by epigenetic modifications mediated by RBPJ
    Samreen Sadaf, Xinyi Zhang, Liqun Lei, Jixing Shen, Imran Jamal, Ganesh Modugu, Partha Dutta · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
  4. Tanshinone I, tanshinone IIA, and cryptotanshinone: key bioactive components modulating vascular smooth muscle cell function
    Jixin Li, Wenru Wang, Hongbo Huang, Ruiling Zhou, Zhenyu Yang, Zhijie Cui, Zelong Niu, Shengnan Shi, Peili Wang · 2025 · Frontiers in Pharmacology
  5. A Comprehensive Review of Epigenetic Regulation of Vascular Smooth Muscle Cells During Development and Disease
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  6. Mitigating Vascular Inflammation by Mimicking AIBP Mechanisms: A New Therapeutic End for Atherosclerotic Cardiovascular Disease
    Jun‐Dae Kim, Abhishek Jain, Longhou Fang · 2024 · International Journal of Molecular Sciences
  7. The Dichotomy of Vascular Smooth Muscle Differentiation/De- Differentiation in Health and Disease
    Mariana Di Luca, Roya Hakimjavadi, Denise Burtenshaw, Emma Fitzpatrick, Pattie Mathiue, Caitríona Lally, Eileen M. Redmond, Paul Aidan Cahill · 2018 · InTech eBooks
  8. Dynamic Interplay Between Smooth Muscle Cells and Macrophages in Vascular Disease
    Hiroshi Iwata, Masanori Aikawa · 2015 · InTech eBooks
  9. Studying Epigenomics in Single Cells: What is Feasible and what can we Learn?
    Quin F. Wills, Douglas R. Higgs, Adam J. Mead · 2015 · Epigenomics
  10. Quadruplex-interacting compounds for regulating the translation of the Epstein–Barr virus nuclear antigen 1 (EBNA1) mRNA: A new strategy to prevent and treat EBV-related cancers
    A. Granzhan, R. P. Martins, R. Fåhraeus, M. Blondel, M. Teulade-Fichou · 2020 · Annual Reports in Medicinal Chemistry
  11. The interplay of membrane cholesterol and substrate on vascular smooth muscle biomechanics
    Hanna J. Sanyour, Alex P. Rickel, Zhongkui Hong · 2020 · Current topics in membranes
  12. Application and Prospect of Single-Cell Sequencing in Cancer Metastasis
    Yue Zheng, Xiaofeng Yang · 2022 · Future Oncology
  13. Immune cells in carotid artery plaques: what can we learn from endarterectomy specimens?
    Hana Kubatova, R. Poledne, Jan V Pitha · 2020 · International Angiology
  14. Native extracellular matrix orientation determines multipotent vascular stem cell proliferation in response to cyclic uniaxial tensile strain and simulated stent indentation
    Pattie S. Mathieu, Emma Fitzpatrick, Mariana Di Luca, Paul Aidan Cahill, Caitríona Lally · 2021 · Biochemistry and Biophysics Reports
  15. Response to Letter Regarding Article, “Contribution of Intimal Smooth Muscle Cells to Cholesterol Accumulation and Macrophage-Like Cells in Human Atherosclerosis”
    Gordon A. Francis, Sima Allahverdian, Ali Cyrus Cheroudi, Thomas Abraham, Bruce M. McManus · 2015 · Circulation
  16. FAM49B Fragmentation by Asparagine Endopeptidase Promotes Vascular Smooth Muscle Cell Migration in Atherogenesis
    Xuying Xiang, Mengting Qin, Lei Nie, Xiaoqing Guo, Jiaojiao Chen, Dailiang Jiang, Zhentao Zhang, Ling Mao · 2025 · Arteriosclerosis Thrombosis and Vascular Biology
  17. The nonexcitable smooth muscle: remodeling the smooth muscle ion transport toolkit in disease
    Martin T. Johnson, Mohamed Trebak · 2026 · Physiological Reviews
  18. Quantitative Analysis of Cellular Composition in Advanced Atherosclerotic Lesions of Smooth Muscle Cell Lineage-Tracing Mice
    Sidney Mahan, Mingjun Liu, Richard A. Baylis, Delphine A Gomez · 2019 · Journal of Visualized Experiments
  19. Visualizing Epigenetics: A Review of Microscopy Techniques for Investigating DNA Methylation Patterns, Chromatin Structure, and Gene Expression
    Anna-Lee C Thompson, Judith L. M. Wopereis, Yonas I. Tekle, Laura A. Katz · 2025 · Microscopy and Microanalysis
  20. In Situ Proximity Ligation Assay for Detection of Proteins, Th eir Interactions and Modifications
    Veronika Brychtová, Bořivoj Vojtěšek · 2014 · Klinicka onkologie
  21. Optical Microscopy and Spectroscopy for Epigenetic Modifications in Single Living Cells
    Yi Cui, Joseph Irudayaraj · 2016 · Methods in pharmacology and toxicology
  22. William Harvey réinterprété à la lumière de l’évolution des espèces (II)
    Jean‐Baptiste Michel · 2020 · médecine/sciences
  23. Combining Multiple Annotations to Count Cells in 3D Cardiovascular Immunofluorescent Images
    William Adorno, Laura S. Shankman, Donald E. Brown · 2021 · IEEE-EMBS International Conference on Biomedical and Health Informatics (BHI ...)
  24. Epigenetic Quenching of VSMC Inflammation in CVD
    Esther Lutgens · 2019 · Arteriosclerosis Thrombosis and Vascular Biology
  25. Activated fatty acid synthesis pathway in macrophages propagates pathogenic fibroblast expansion after myocardial infarction
    Samreen Sadaf, Sathish Babu Vasamsetti, Imran Jamal, Ebin Johny, Khadeja‐Tul Kubra, Shagufta Haque, A.A.S. Rifat Mannan, Babak Razani, Srilakshmi Chaparala, Satoshi Okawa et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
  26. The Complex Role of Methylation in Regulating Vascular Smooth Muscle Cell Phenotypic States in Vascular Remodeling and Atherosclerosis
    Sanjana C. Basak, Delphine A Gomez · 2026 · Biomolecules
  27. Loss of the Coronary Artery Disease Risk Gene LMOD1 in Vascular Smooth Muscle Cells Triggers Rapid-Onset Coronary Atherosclerosis
    Amr R. Salem, Ajay Kumar, Jaser Doja, Alshimaa Wally, Chunyu Ge, Sabrina Robichaud, Orazio J. Slivano, Susan H. Griffin, B. Marshall, Elizabeth Perry et al. · 2026 · Circulation
  28. A third-generation method reveals cell lineage ancestry
    Andrew P. Feinberg · 2013 · Nature Methods
  29. Vascular smooth muscle cell dysfunction: role in arterial stiffening and cardiovascular disease
    Patrick J. Lacolley, Jean‐Baptiste Michel, Delphine A Gomez, Magnus Bäck, Véronique Regnault · 2022 · Elsevier eBooks
  30. Ccn2 deficiency causes smooth muscle cell de-differentiation and severe atherosclerosis in hyperlipidemic mice
    JH Larsen, Jane Stubbe, Hans Christian Beck, Martin Overgaard, Caroline A. Lindegaard, Didde Riisager Hansen, Roel Goldschmeding, Raúl R. Rodrigues-Díez, Marta Ruiz‐Ortega, Charles Pyke et al. · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  31. RNA Sequencing Atherosclerosis Data Sets: Expanding Potential Therapeutic Targets
    Marina S. Hernandes, Kathy K. Griendling · 2024 · Circulation Research
  32. Proximity in chromatin : opportunities for innovations
    Samer Yammine · 2014 · Figshare
  33. New Developments in Targeted Analysis of Protein Posttranslational Modifications
    René B. H. Braakman, Arzu Umar · 2013 · Current Proteomics
  34. Smooth Muscle Cell to Macrophage Differentiation in Atherosclerosis - Remaining Limitations and Questions
    Ashley M. Fenn · 2015 · RePEc: Research Papers in Economics
  35. Strategies for Studying Chromatin Regulation and Organization
    Son C. Nguyen · 2016 · Digital Access to Scholarship at Harvard (DASH) (Harvard University)
  36. Radiosensitive Smooth Muscle Cells Populate Neointimal Lesions Through a Platelet Derived Growth Factor Receptor Beta Dependent Mechanism
    Steven Griffith · 2016
  37. Identification of Phenotypically Modulated SMCs within Atherosclerotic Lesions and the Role of Pluripotency Factors, KLF4 and OCT4, in their Modulation
    Laura S. Shankman · 2014
  38. The Calcium Binding Protein S100β Marks Hedgehog-Responsive Perivascular Stem Cells That Contribute to Intimal Thickening Following Iatrogenic Flow Restriction
    Mariana Di Luca, Emma Fitzpatrick, Denise Burtenshaw, Weimin Liu, Jay-Christian Paul Helt, Roya Hakimjavadi, Eoin Corcoran, Yusof Gusti, Daniel Sheridan, Susan Harman et al. · 2020 · SSRN Electronic Journal
  39. Faculty Opinions recommendation of Extensive proliferation of a subset of differentiated, yet plastic, medial vascular smooth muscle cells contributes to neointimal formation in mouse injury and atherosclerosis models.
    Stephen Mark Schwartz · 2018 · Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature
  40. Faculty Opinions recommendation of Vascular cells in blood vessel wall development and disease.
    Stephen Mark Schwartz · 2018 · Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature
  41. Inflammatory actions of chemokines and extracellular versicles in pathological tissue remodeling
    Dawid Kaczor · 2022
  42. Human primary plaque cell cultures to study mechanisms of atherosclerosis
    Michele F. Buono, Ernest Diez Benavente, Lotte Slenders, Daisey Methorst, Daniëlle E. Tessels, Eloi Mili, Roxy Finger, Daniek Kapteijn, Mark Daniels, Noortje A. M. van den Dungen et al. · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  43. Cellular microarrays for assessing single-cell phenotypic changes in vascular cell populations
    Ewen Smith, Michele Zagnoni, Mairi E. Sandison · 2023 · Biomedical Microdevices
  44. Smooth muscle cell oligoclonality in vascular disease: same origin, different destinies
    Ljubica Perisic Matic, Melody Chemaly, Ulf Hedin · 2023 · Cardiovascular Research
  45. BST2 induces vascular smooth muscle cell plasticity and phenotype switching during cancer progression
    Caitlin Bell, Richard A. Baylis, Nicolas Gabriel Lopez, Wei Feng, Hua Gao, Fudi Wang, Sharika Bamezai, Changhao Fu, Yoko Kojima, Shaunak Sanjay Adkar et al. · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  46. Making Visible the Proximity Between Proteins
    Carl-Magnus Clausson · 2014 · KTH Publication Database DiVA (KTH Royal Institute of Technology)
  47. Focal adhesion proteins confer smooth muscle anoikis resistance and protection against aortic aneurysm and dissection
    Zhenyuan Zhu, Mingjun Liu, Jianxin Wei, Deepa Suryanarayan, Parya Behzadi, Robert Edgar, Julie A. Phillippi, Cynthia St. Hilaire, Cristina Espinosa‐Díez, Delphine A Gomez · 2026 · JCI Insight
  48. Recherche de nouveaux déterminants génétiques et épigénétiques de susceptibilité à la tumorigenèse intestinale au moyen du modèle murin Apcd14
    Stanislas Quesada · 2013 · theses.fr (ABES)
  49. Contractility-induced morphological transitions in smooth muscle cells
    Xiuyu Wang · 2021
  50. Significance of copper homeostasis in pathophysiology of human aortic vascular smooth muscle cells : role in calcification and cell migration
    Iurii A. Orlov · 2023 · theses.fr (ABES)
  51. Endothelial Cell Phenotypic Plasticity in Atherosclerosis
    Laura Alonso-Herranz, Julián Albarrán-Juárez · 2026 · Handbook of experimental pharmacology
  52. CASC15 dictates vascular smooth muscle cell growth fate and pathological vascular remodeling through post-transcription regulation of mitotic fidelity
    Ibrahim A. Ahmed, Lakshanya Rajaganapathi, Santiago Rivero, Jianxin Wei, Sebastian Morales-Bermudez Espinel, Ariane Bruder‐Nascimento, Angelina Kendi, Thiago B Bruder-Nascimento, Cristina Espinosa‐Díez, Delphine A Gomez · 2026 · bioRxiv (Cold Spring Harbor Laboratory)
  53. Inducing CD8 + Tregs Limits Atherosclerosis via Notch-Mediated VSMC Quiescence
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