Quantitative analysis of chromosome conformation capture assays (3C-qPCR)

Hagège, Hélène, Klous, Petra, Braem, Caroline, Splinter, Erik, Dekker, Job, Cathala, Guy, de Laat, Wouter, Forné, Thierry·2007·Nature Protocols
DOI 10.1038/nprot.2007.243

Cited by (747)

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  65. Additional file 1 of Dissecting super-enhancer driven transcriptional dependencies reveals novel therapeutic strategies and targets for group 3 subtype medulloblastoma
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  66. Additional file 2 of GATA2 co-opts TGFβ1/SMAD4 oncogenic signaling and inherited variants at 6q22 to modulate prostate cancer progression
    Xiayun Yang, Qin Zhang, Shuxuan Li, Raman Devarajan, Binjie Luo, Zenglai Tan, Zixian Wang, Nikolaos Giannareas, Tomasz Wenta, Wenlong Ma et al. · 2023 · Figshare
  67. Additional file 4 of Wheat chromatin architecture is organized in genome territories and transcription factories
    Lorenzo Concia, Alaguraj Veluchamy, Juan S. Ramirez-Prado, Azahara Carmen Martín, Ying Huang, Magali Perez, Séverine Domenichini, Natalia Yaneth Rodriguez‐Granados, Soon-Kap Kim, Thomas Blein et al. · 2020 · Figshare
  68. Additional file 6 of High-resolution Hi-C maps highlight multiscale 3D epigenome reprogramming during pancreatic cancer metastasis
    Bo Ren, Jinshou Yang, Chengcheng Wang, Gang Yang, Huanyu Wang, Chen, Yuan, Ruiyuan Xu, Xuning Fan, Lei You, Taiping Zhang et al. · 2021 · Figshare
  69. Additional file 4 of Epigenetic reprogramming-induced guanidinoacetic acid synthesis promotes pancreatic cancer metastasis and transcription-activating histone modifications
    Jinshou Yang, Ren, Bo, Ren, Jie, Gang Yang, Yuan Fang, Xing Wang, Feihan Zhou, Lei You, Yupei Zhao · 2023 · Figshare
  70. Additional file 2 of High-resolution Hi-C maps highlight multiscale 3D epigenome reprogramming during pancreatic cancer metastasis
    Bo Ren, Jinshou Yang, Chengcheng Wang, Gang Yang, Huanyu Wang, Chen, Yuan, Ruiyuan Xu, Xuning Fan, Lei You, Taiping Zhang et al. · 2021 · Figshare
  71. Additional file 5 of High-resolution Hi-C maps highlight multiscale 3D epigenome reprogramming during pancreatic cancer metastasis
    Bo Ren, Jinshou Yang, Chengcheng Wang, Gang Yang, Huanyu Wang, Chen, Yuan, Ruiyuan Xu, Xuning Fan, Lei You, Taiping Zhang et al. · 2021 · Figshare
  72. Additional file 9 of Epigenetic reprogramming-induced guanidinoacetic acid synthesis promotes pancreatic cancer metastasis and transcription-activating histone modifications
    Jinshou Yang, Bo Ren, Ren, Jie, Gang Yang, Yuan Fang, Xing Wang, Feihan Zhou, Lei You, Yupei Zhao · 2023 · Figshare
  73. Additional file 6 of Dissecting super-enhancer driven transcriptional dependencies reveals novel therapeutic strategies and targets for group 3 subtype medulloblastoma
    Meng Li, Yujie Han, Chaochen Wang, Wenfeng Kang, Wenyan Jiang, Lei Zhang, Yujie Tang · 2022 · Figshare
  74. Additional file 6 of Epigenetic reprogramming-induced guanidinoacetic acid synthesis promotes pancreatic cancer metastasis and transcription-activating histone modifications
    Jinshou Yang, Ren, Bo, Jie Ren, Gang Yang, Yuan Fang, Xing Wang, Feihan Zhou, Lei You, Yupei Zhao · 2023 · Figshare
  75. Additional file 7 of Epigenetic reprogramming-induced guanidinoacetic acid synthesis promotes pancreatic cancer metastasis and transcription-activating histone modifications
    Jinshou Yang, Ren, Bo, Ren, Jie, Gang Yang, Yuan Fang, Xing Wang, Feihan Zhou, Lei You, Yupei Zhao · 2023 · Figshare
  76. Additional file 5 of Dissecting super-enhancer driven transcriptional dependencies reveals novel therapeutic strategies and targets for group 3 subtype medulloblastoma
    Meng Li, Yujie Han, Chaochen Wang, Wenfeng Kang, Wenyan Jiang, Lei Zhang, Yujie Tang · 2022 · Figshare
  77. Additional file 4 of High-resolution Hi-C maps highlight multiscale 3D epigenome reprogramming during pancreatic cancer metastasis
    Bo Ren, Jinshou Yang, Chengcheng Wang, Gang Yang, Huanyu Wang, Chen, Yuan, Ruiyuan Xu, Xuning Fan, Lei You, Taiping Zhang et al. · 2021 · Figshare
  78. Additional file 4 of Dissecting super-enhancer driven transcriptional dependencies reveals novel therapeutic strategies and targets for group 3 subtype medulloblastoma
    Meng Li, Yujie Han, Chaochen Wang, Wenfeng Kang, Wenyan Jiang, Lei Zhang, Yujie Tang · 2022 · Figshare
  79. Additional file 2 of Dissecting super-enhancer driven transcriptional dependencies reveals novel therapeutic strategies and targets for group 3 subtype medulloblastoma
    Meng Li, Yujie Han, Chaochen Wang, Wenfeng Kang, Wenyan Jiang, Lei Zhang, Yujie Tang · 2022 · Figshare
  80. Additional file 4 of Bacon: a comprehensive computational benchmarking framework for evaluating targeted chromatin conformation capture-specific methodologies
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  81. Additional file 2 of Epigenetic reprogramming-induced guanidinoacetic acid synthesis promotes pancreatic cancer metastasis and transcription-activating histone modifications
    Jinshou Yang, Bo Ren, Ren, Jie, Gang Yang, Yuan Fang, Xing Wang, Feihan Zhou, Lei You, Yupei Zhao · 2023 · Figshare
  82. Additional file 2 of Wheat chromatin architecture is organized in genome territories and transcription factories
    Lorenzo Concia, Alaguraj Veluchamy, Juan S. Ramirez-Prado, Azahara Carmen Martín, Ying Huang, Magali Perez, Séverine Domenichini, Natalia Yaneth Rodriguez‐Granados, Soon-Kap Kim, Thomas Blein et al. · 2020 · Figshare
  83. Additional file 3 of High-resolution Hi-C maps highlight multiscale 3D epigenome reprogramming during pancreatic cancer metastasis
    Bo Ren, Jinshou Yang, Chengcheng Wang, Gang Yang, Huanyu Wang, Chen, Yuan, Ruiyuan Xu, Xuning Fan, Lei You, Taiping Zhang et al. · 2021 · Figshare
  84. Additional file 2 of Bacon: a comprehensive computational benchmarking framework for evaluating targeted chromatin conformation capture-specific methodologies
    Li Tang, Matthew C. Hill, Patrick T. Ellinor, Min Li · 2022 · Figshare
  85. Additional file 3 of Epigenetic reprogramming-induced guanidinoacetic acid synthesis promotes pancreatic cancer metastasis and transcription-activating histone modifications
    Jinshou Yang, Bo Ren, Ren, Jie, Gang Yang, Yuan Fang, Xing Wang, Feihan Zhou, Lei You, Yupei Zhao · 2023 · Figshare
  86. Additional file 3 of Wheat chromatin architecture is organized in genome territories and transcription factories
    Lorenzo Concia, Alaguraj Veluchamy, Juan S. Ramirez-Prado, Azahara Carmen Martín, Ying Huang, Magali Perez, Séverine Domenichini, Natalia Yaneth Rodriguez‐Granados, Soon-Kap Kim, Thomas Blein et al. · 2020 · Figshare
  87. Additional file 3 of Dissecting super-enhancer driven transcriptional dependencies reveals novel therapeutic strategies and targets for group 3 subtype medulloblastoma
    Meng Li, Yujie Han, Chaochen Wang, Wenfeng Kang, Wenyan Jiang, Lei Zhang, Yujie Tang · 2022 · Figshare
  88. Additional file 3 of Bacon: a comprehensive computational benchmarking framework for evaluating targeted chromatin conformation capture-specific methodologies
    Li Tang, Matthew C. Hill, Patrick T. Ellinor, Min Li · 2022 · Figshare
  89. Additional file 5 of Epigenetic reprogramming-induced guanidinoacetic acid synthesis promotes pancreatic cancer metastasis and transcription-activating histone modifications
    Jinshou Yang, Bo Ren, Jie Ren, Gang Yang, Yuan Fang, Xing Wang, Feihan Zhou, Lei You, Yupei Zhao · 2023 · Figshare
  90. Additional file 1 of Epigenetic reprogramming-induced guanidinoacetic acid synthesis promotes pancreatic cancer metastasis and transcription-activating histone modifications
    Jinshou Yang, Bo Ren, Jie Ren, Gang Yang, Yuan Fang, Xing Wang, Feihan Zhou, Lei You, Yupei Zhao · 2023 · Figshare
  91. Additional file 1 of High-resolution Hi-C maps highlight multiscale 3D epigenome reprogramming during pancreatic cancer metastasis
    Bo Ren, Jinshou Yang, Chengcheng Wang, Gang Yang, Huanyu Wang, Chen, Yuan, Ruiyuan Xu, Xuning Fan, Lei You, Taiping Zhang et al. · 2021 · Figshare
  92. Germline cis variant determines epigenetic regulation of the anti-cancer drug metabolism gene dihydropyrimidine dehydrogenase (DPYD)
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