The ecology and biogeochemistry of stream biofilms

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Items 501–600 of 1,000

1. Use of trait concepts and terminology in freshwater ecology: Historic, current, and future perspectives
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2. Metal concentration in freshwater sediments is linked to microbial biodiversity and community composition
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3. Do biofilm communities respond to the chemical signatures of fracking? A test involving streams in North-central Arkansas
   Wilson Howard Johnson, Marlis R. Douglas, Jeffrey A. Lewis, Tara N. Stuecker, Franck G. Carbonero, Bradley J. Austin, Michelle A. Evans‐White, Sally A. Entrekin, Michael Edward Douglas · 2017 · BMC Microbiology
4. Salinization effects on stream biofilm functioning
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5. Pesticide Mixtures Cause Short-Term, Reversible Effects on the Function of Autotrophic Periphyton Assemblages
   Maria Alexandra Bighiu, Steffi Gottschalk, Åsa Arrhenius, Willem Goedkoop · 2020 · Environmental Toxicology and Chemistry
6. Watershed farmland area and instream water quality co-determine the stream primary producer in the central Hengduan Mountains, southwestern China
   Sicheng Ao, Ming‐Chih Chiu, Xianfu Li, Lu Tan, Qinghua Cai, Lin Ye · 2021 · The Science of The Total Environment
7. Streambed migration frequency drives ecology and biogeochemistry across spatial scales
   Ute Risse‐Buhl, Shai Arnon, Edo Bar‐Zeev, Anna Oprei, Aaron I. Packman, Ignacio Peralta‐Maraver, Anne L. Robertson, Yoni Teitelbaum, Michael Mutz · 2023 · Wiley Interdisciplinary Reviews Water
8. Homogeneous Environmental Selection Structures the Bacterial Communities of Benthic Biofilms in Proglacial Floodplain Streams
   Jade Brandani, Hannes Peter, Stilianos Fodelianakis, Tyler J. Kohler, Massimo Bourquin, Grégoire Michoud, Susheel Bhanu Busi, Leïla Ezzat, Stuart Nicholas Lane, Tom J. Battin · 2023 · Applied and Environmental Microbiology
9. Going with the flow: Planktonic processing of dissolved organic carbon in streams
   Daniel Graeber, Jane Rosenstand Poulsen, Marlen Heinz, Jes Jessen Rasmussen, Dominik Žák, Björn Gücker, Brian Kronvang, Norbert Kamjunke · 2017 · The Science of The Total Environment
10. Environmental Control on Microbial Turnover of Leaf Carbon in Streams – Ecological Function of Phototrophic-Heterotrophic Interactions
    Jenny Fabian, Sanja Zlatanović, Michael Mutz, Hans‐Peter Grossart, Robert van Geldern, Andreas Ulrich, Gerd Gleixner, Katrin Premke · 2018 · Frontiers in Microbiology
11. Grazers superimpose humidity effect on stream biofilm resistance and resilience to dry-rewet stress
    Anna Oprei, Sanja Zlatanović, Michael Mutz · 2018 · The Science of The Total Environment
12. Subsea tunnel reinforced sprayed concrete subjected to deterioration harbours distinct microbial communities
    Sabina Karačić, Britt‐Marie Wilén, Carolina Suarez, Per Hagelia, Frank Persson · 2018 · Biofouling
13. The biotic contribution to the benthic stream sediment phosphorus buffer
    Zachary Simpson, Richard William McDowell, Leo Murtagh Condron · 2020 · Biogeochemistry
14. Bedform segregation and locking increase storage of natural and synthetic particles in rivers
    Jonathan Dallmann, Colin B. Phillips, Yoni Teitelbaum, Edwin Saavedra Cifuentes, N. L. Sund, Rina A. Schumer, Shai Arnon, Aaron I. Packman · 2021 · Nature Communications
15. Ecological Roles and Shared Microbes Differentiate the Plastisphere from Natural Particle-Associated Microbiomes in Urban Rivers
    Yingyu Bao, Yuen‐Wa Ho, Zhiyong Shen, Edmund Y. M. Lam, James Kar‐Hei Fang, Kmy Leung, Patrick K. H. Lee · 2025 · Environmental Science & Technology
16. Biological Natural Attenuation and Contaminant Oxidation in Sediment Caps: Recent Advances and Future Opportunities
    Giovanna Pagnozzi, Sean Carroll, Danny D. Reible, Kayleigh A. Millerick · 2020 · Current Pollution Reports
17. Beaver Pond Geomorphology Influences Pond Nitrogen Retention and Denitrification
    Desneiges S. Murray, Bethany T. Neilson, Janice Brahney · 2023 · Journal of Geophysical Research Biogeosciences
18. Sediments and Microbiomes
    Warwick F. Vincent, Michio Kumagai, Raoul‐Marie Couture · 2023 · Elsevier eBooks
19. Assessing the Influence of Hand-Dug Well Features and Management on Water Quality
    Christian Julien Isac Gnimadi, Kokoutse Gawou, Michael Aboah, Emmanuel Odame Owiredu, Junias Adusei-Gyamfi · 2024 · Environmental Health Insights
20. Effect of microbial growth and electron competition on nitrous oxide source and sink function of hyporheic zones
    Zhixin Zhang, Yang Xian, Ping Xue, Menggui Jin, Huirong Guo · 2024 · Journal of Hydrology
21. Environmental concentrations of the fungicide tebuconazole alter microbial biodiversity and trigger biofilm-released transformation products
    Daniela Gómez-Martínez, Mary A. Selvin, Anders K. Nilsson, Eric Carmona, Judith Sorel Ngou, Erik Kristiansson, R. Henrik Nilsson, Natàlia Corcoll · 2024 · Chemosphere
22. Biofilm-specific uptake does not explain differences in whole-stream DOC tracer uptake between a forest and an agricultural stream
    Daniel Graeber, Björn Gücker, Romy Wild, Naomi S. Wells, Christine Anlanger, Norbert Kamjunke, Helge Norf, Christian Schmidt, Mario Brauns · 2019 · Biogeochemistry
23. A pore-scale study of flow and transport across the sediment–water interface: From dispersive to turbulent regimes
    Yilin Chen, Guangqiu Jin, Pei Zhang, Qihao Jiang, Silin Wu, Sergio Andres Galindo Torres, Ling Li · 2021 · Physics of Fluids
24. Spatiotemporal correlations between water quality and microbial community of typical inflow river into Taihu Lake, China
    Yajie Zhang, Ye Zhang, Lecheng Wei, Mengyan Li, Weitang Zhu, Liang Zhu · 2022 · Environmental Science and Pollution Research
25. Bacterial communities in a subarctic stream network: Spatial and seasonal patterns of benthic biofilm and bacterioplankton
    Jacqueline Malazarte, Timo Muotka, Jussi Jyväsjärvi, Kaisa Lehosmaa, Joel Nyberg, Kaisa‐Leena Huttunen · 2022 · Molecular Ecology
26. Effects of global change on the ability of stream biofilm to dissipate the herbicide glyphosate
    Selma Abdelhak, Yoann Menard, Joan Artigas · 2023 · Environmental Pollution
27. Undesirable river biofilms: The composition, environmental drivers, and occurrence of sewage fungus
    Benjamin Exton, Francis Hassard, Ángel Medina, Robert Grabowski · 2024 · Ecological Indicators
28. Metagenome Analyses of Multispecies Microbial Biofilms: First Steps Toward Understanding Diverse Microbial Systems on Surfaces
    Christel Schmeisser, Ines Krohn-Molt, Wolfgang R. Streit · 2017 · Springer eBooks
29. Clay beads as artificial trapping matrices for monitoring bacterial distribution among urban stormwater infiltration systems and their connected aquifers
    Florian Mermillod‐Blondin, Jérémy Voisin, Laurence Marjolet, Pierre Marmonier, Benoît Cournoyer · 2019 · Environmental Monitoring and Assessment
30. Dynamic responses of community structure and microbial functions of periphytic biofilms during chronic exposure to TiO 2 NPs
    Jun Hou, Tengfei Li, Lingzhan Miao, Guoxiang You, Yi Ming Xu, Songqi Liu · 2019 · Environmental Science Nano
31. Do leaf‐litter decomposers control biofilm primary production and benthic algal community structure in forest streams? Insights from an outdoor mesocosm experiment
    Joey L. Allen, Martin Laviale, María Cellamare, Quentin Bachelet, Vincent Felten, Michaël Danger · 2020 · Freshwater Biology
32. Four species of bacteria deterministically assemble to form a stable biofilm in a millifluidic channel
    Amaury Monmeyran, W. Benyoussef, Philippe Thomen, Narimane Dahmane, Aurélie Baliarda, Matthieu Jules, Stéphane Aymerich, Nelly Henry · 2021 · npj Biofilms and Microbiomes
33. Diversity and community composition of nirS-type denitrifying bacteria and ammonia-oxidizing archaea in biofilm samples attached to bio-substrate and abio-substrates in integrated ecological floating bed systems
    Shuyu Xing, Chunzi Wen, Lubin Yuan, Xin Liu, Xiaohong Zhou, Xisi Xiao, Qianqian Ma · 2022 · Ecological Engineering
34. Periphyton-Driven Arsenic Methylation in Paddy Soils: The Crucial Role of Trophic Interactions
    Guanhong Chen, Yuxuan Wang, Xin Zhang, Kai Jiang, Min Yu, Liping Fang, Fangbai Li · 2025 · Environmental Science & Technology
35. Functional redundancy enhances microbial resilience in streams: mitigating flow perturbations
    Qiaoyan Lin, Yixin Zhang, Robert Hunter Marrs, Naicheng Wu, Raju Sekar, Noël P. D. Juvigny‐Khenafou, Christoph D. Matthaei, Jeremy J. Piggott · 2025 · Frontiers in Microbiology
36. Machine learning–based inverse design for electrochemically controlled microscopic gradients of O 2 and H 2 O 2
    Yi Chen, Jingyu Wang, Benjamin B. Hoar, Shengtao Lu, Xun Guan, Chong Liu · 2022 · Proceedings of the National Academy of Sciences
37. Effects of wetland, tide, and season on benthic biofilms and related sediment properties in mangrove ecosystems
    Lihua Yang, Qian Yang, Li Lin, Tiangang Luan, Qiong Yang, Pu Li, N.F.Y. Tam · 2022 · Frontiers in Marine Science
38. Biosynthesis of gold nanoparticles and inhibition of various stages of bacterial biofilms formed by drug-resistant Aeromonas hydrophila, Escherichia coli, and Klebsiella pneumoniae
    Charisma James, Gaurav Kumar · 2022 · Archives of Microbiology
39. Eukaryotes contribute more than bacteria to the recovery of freshwater ecosystem functions under different drought durations
    Chaoran Li, Lingzhan Miao, Tanveer M. Adyel, Wei Huang, Jianjun Wang, Jun Feng Wu, Jun Hou, Zhiyuan Wang · 2023 · Environmental Microbiology
40. Linking denitrification and pesticide transformation potentials with community ecology and groundwater discharge in hyporheic sediments in a lowland stream
    Tina Bundgaard Bech, Jennifer Hellal, Nora Badawi, Rasmus Jakobsen, Jens Aamand · 2023 · Water Research
41. Long-term functional recovery and associated microbial community structure after sediment drying and bedform migration
    Anna Oprei, José Schreckinger, Tatiana Kholiavko, Aline Frossard, Michael Mutz, Ute Risse‐Buhl · 2023 · Frontiers in Ecology and Evolution
42. Dissipation of pesticides by stream biofilms is influenced by hydrological histories
    Lluís Bertrans-Tubau, Yoann Menard, Isabelle Batisson, Nicolas Creusot, Nicolás Mazzella, Débora Millan-Navarro, Aurélie Moreira, Soizic Morin, Sergio P Ponsa, Meritxell Abril et al. · 2023 · FEMS Microbiology Ecology
43. Treatment efficiency and microbial community analysis in the integrated bioremediation system of aquaculture wastewater with the ceramsite and compound bacteria
    Yingzhen Wei, Ding Shen, Mohammed Naeem Ramzan, Arslan Emmanuel, Jinyong Zhu, Wen Yang, Yangcai Wang, Zhongming Zheng · 2024 · International Biodeterioration & Biodegradation
44. Substrate promiscuity of xenobiotic-transforming hydrolases from stream biofilms impacted by treated wastewater
    Yaochun Yu, Niklas Ferenc Trottmann, Milo R. Schärer, Kathrin Fenner, Serina L. Robinson · 2024 · Water Research
45. Evolution and distribution of antibiotic resistance genes in submerged macrophytes and biofilm systems: From seasonal monitoring to mesocosm experiments
    Zuhan Ge, Dan Ai, Zihang Ma, Yaguang Li, Jibiao Zhang · 2024 · Journal of Environmental Management
46. Biodiversity of multi-trophic biological communities within riverine sediments impacted by PAHs contamination and land use changes
    Yulu Tian, Yongrong Hao, Chengkai Qu, Yang Fang-she, Hisato Iwata, Jiahua Guo · 2024 · Environmental Pollution
47. Keystone microbial taxa identified by deep learning reveal mechanisms of phosphorus stoichiometric homeostasis in submerged macrophytes under different hydrodynamic states
    Shenyang Pan, Wenlong Zhang, Feng Yan, Yanan Ding, Ferdi L. Hellweger, Jiahui Shang, Yuting Yan, Yu‐Qi Feng, Yi Li · 2025 · Water Research
48. Purification of Dye-stuff Contained Wastewater by a Hybrid Adsorption-Periphyton Reactor (HAPR): Performance and Mechanisms
    Yanfang Feng, Lihong Xue, Jingjing Duan, Dionysios D. Dionysiou, Yudong Chen, Linzhang Yang, Zhi Cheng Guo · 2017 · Scientific Reports
49. Benchmarking protocols for the metagenomic analysis of stream biofilm viromes
    Meriem Bekliz, Jade Brandani, Massimo Bourquin, Tom J. Battin, Hannes Peter · 2019 · PeerJ
50. Assessing the feasibility and value of employing an ecosystem services approach in chemical environmental risk assessment under the Water Framework Directive
    Andrew Ross Brown, Stuart Marshall, Chris Cooper, Paul Whitehouse, Paul J. Van den Brink, J.H. Faber, Lorraine Lucy Maltby · 2021 · The Science of The Total Environment
51. Benthic Biofilm Bacterial Communities and Their Linkage with Water-Soluble Organic Matter in Effluent Receivers
    Longfei Wang, Yutao Wang, Yi Li, Wenlong Zhang, Huanjun Zhang, Lihua Niu, Nuzahat Habibul · 2022 · International Journal of Environmental Research and Public Health
52. Quantifying impacts of titanium dioxide nanoparticles on natural assemblages of riverine phytobenthos and phytoplankton in an outdoor setting
    Marian Louise Yallop, Yunyang Wang, Seigo Masuda, J.A. Daniels, Αmy Ockenden, Hannah Masani, Tom B. Scott, Fang Xie, Mary P. Ryan, Christopher Jones et al. · 2022 · The Science of The Total Environment
53. Unexpected functional diversity of stream biofilms within and across proglacial floodplains despite close spatial proximity
    Grégoire Michoud, Tyler J. Kohler, Hannes Peter, Jade Brandani, Susheel Bhanu Busi, Tom J. Battin · 2023 · Limnology and Oceanography
54. Linking biofilm spatial structure to real-time microscopic oxygen decay imaging
    S. Rubol, Anna Freixa, Xavier Sánchez‐Vila, Anna M. Romaní · 2018 · Biofouling
55. Towards an Evolutionary Perspective in Teaching and Popularizing Microbiology
    Fernando Fraga · 2018 · Journal of Microbiology and Biology Education
56. Interplay between sediment properties and stream flow conditions influences surface sediment organic matter and microbial biomass in a Mediterranean river
    Vannak Ann, Anna Freixa, Andrea Butturini, Anna M. Romaní · 2018 · Hydrobiologia
57. Coupled macronutrient cycling in stream biofilms: Effects of stoichiometry, light and temperature
    Marc I. Stutter, Adam J. Wyness, Helen Watson, N. Dodd · 2019 · The Science of The Total Environment
58. AC Electric Field Mediated Assembly of Bacterial Tetrads
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59. Consumer–resource dynamics in Arctic ponds
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60. Two different approaches of microbial community structure characterization in riverine epilithic biofilms under multiple stressors conditions: Developing molecular indicators
    Lorenzo Pin, Alexander Eiler, Stefano Fazi, Nikolai R. Friberg · 2021 · Molecular Ecology Resources
61. Experimental desiccation indicates high moisture content maintains hyporheic biofilm processes during drought in temperate intermittent streams
    Laura E. Coulson, Jakob Schelker, Katrin Attermeyer, Christian Griebler, Thomas Illig. Alexander Hein, Gabriele Weigelhofer · 2021 · Aquatic Sciences
62. Environmental impact and diversity of protease-producing bacteria in areas of leather tannery effluents of Sialkot, Pakistan
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63. Nutrient availability and organic matter quality shape bacterial community structure in a lake biofilm
    Rody C. Seballos, Kevin H. Wyatt, RJ Bernot, Shawn P. Brown, Sudeep Chandra, Allison R. Rober · 2020 · Aquatic Microbial Ecology
64. Nutrients and Pharmaceuticals Structure Bacterial Core Communities in Urban and Montane Stream Biofilms
    Elizabeth M. Ogata, Michelle A. Baker, Emma J. Rosi, Trevor B. Smart, Donald Long, Zachary T. Aanderud · 2020 · Frontiers in Microbiology
65. Resource limitation of autotrophs and heterotrophs in boreal forest headwater streams
    Sophie A. Weaver, Jeremy B. Jones · 2022 · Freshwater Science
66. Turbulence‐Driven Clogging of Hyporheic Zones by Fine Particle Filtration
    Edwin Saavedra Cifuentes, Yoni Teitelbaum, Shai Arnon, Jonathan Dallmann, Colin B. Phillips, Aaron I. Packman · 2023 · Geophysical Research Letters
67. Naturalization of treated wastewater by a constructed wetland in a water-scarce Mediterranean region
    Carlos Rochera, María Peña, Antonio Picazo, Daniel Morant, Javier Miralles‐Lorenzo, Alba Camacho‐Santamans, María Belenguer‐Manzanedo, Tatiana Montoya, Gloria Fayos, Antonio Camacho · 2024 · Journal of Environmental Management
68. Combined effects of micropollutants and their degradation on prokaryotic communities at the sediment–water interface
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69. Experimental evidence on the impact of climate-induced hydrological and thermal variations on glacier-fed stream biofilms
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70. Electrogenic dynamics of biofilm formation: Correlation between genetic expression and electrochemical activity in Bacillus subtilis
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71. Natural Dynamics: Fresh Insight into the Succession of Microplastic-Borne Bacterial Communities along Riverine Courses to the Ocean
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72. Concentration Dependency of PFOS Bioaccumulation by Freshwater Benthic Algae
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73. Ecosystem engineering in the streambed: Net‐spinning caddisflies influence hydraulic properties
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74. Factors Controlling the Spatial Distribution of Dissolved Organic Matter With Changes in the C/N Ratio From the Upper to Lower Reaches of the Ishikari River, Japan
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75. Macrophyte habitat architecture and benthic-pelagic coupling: Photic habitat demand to build up large P storage capacity and bio-surface by underwater vegetation
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76. The dark side of the moon: first insights into the microbiome structure and function of one of the last glacier-fed streams in Africa
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77. Key bacterial groups maintain stream multifunctionality in response to episodic drying
    Giulia Gionchetta, Rebeca Arias‐Real, Pilar Hurtado, Helmut Bürgmann, Cayetano Gutiérrez‐Cánovas · 2024 · Limnology and Oceanography Letters
78. Use of in-field bioreactors demonstrate groundwater filtration influences planktonic bacterial community assembly, but not biofilm composition
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79. Potential and Feasibility of the Microalgal System in Removal of Pharmaceutical Compounds from Wastewater
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80. Housekeeping in the Hydrosphere: Microbial Cooking, Cleaning, and Control under Stress
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81. Sorption of selected pharmaceuticals on river benthic biofilms formed on artificial substrata
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82. Distribution and photosynthetic potential of epilithic periphyton along an altitudinal gradient in Jue River (Qinling Mountain, China)
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83. The habitat differentiation, dynamics and functional potentials of bacterial and micro-eukaryotic communities in shrimp aquaculture systems with limited water exchange
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84. Spatial Variability in Streambed Microbial Community Structure across Two Watersheds
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85. Resistance but not recovery is related to the role of specialist taxa in river communities submitted to hydric stress
    Laura Jiménez, Anna Freixa, Neus Besolí-Mestres, Sergi Sabater · 2023 · The Science of The Total Environment
86. Biophysical contexture of coastal biofilm-sediments varies heterogeneously and seasonally at the centimeter scale across the bed-water interface
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87. Relationship between stream size, watershed land use, and pesticide concentrations in headwater streams
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88. Dispersal of a dominant competitor can drive multispecies coexistence in biofilms
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89. Turbulent flow over random sphere packs – an investigation by pore-resolved direct numerical simulation
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90. Origin and assembly characteristics of periphyton microbes in subtropical paddy fields: A case study in Tuojia catchment in Southern China
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91. Enclosure restoration regulates epiphytic microbial communities involved in carbon sequestration in a restored urban lake: A new insight from the stability of dissolved organic matter
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92. Insights into freshwater lake abiotic and biotic carrier biofilm nitrogen transformation and N₂O emission patterns: A 15N isotope tracing study
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93. Can the carbon metabolic activity of biofilm be regulated by the hydrodynamic conditions in urban rivers?
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94. Biofilms on plastic litter in an urban river: Community composition and activity vary by substrate type
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95. Contribution of groundwater-borne nutrients to eutrophication potential and the share of benthic algae in a large lowland river
    Julia Zill, Núria Perujo, Patrick Fink, Ulf Mallast, Christian Siebert, Markus Weitere · 2024 · The Science of The Total Environment
96. Response of stream habitat and microbiomes to spruce budworm defoliation: New considerations for outbreak management
    M. L. O. Mccaig, Karen A. Kidd, Emily E. Smenderovac, Brittany G. Perrotta, Caroline E. Emilson, Michael Stastny, Lisa Venier, Erik J. S. Emilson · 2024 · Ecological Applications
97. Testing the influence of sediment granulometry on heterotrophic respiration with a new laboratory flow-through system
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98. Responses of Periphyton Microbial Growth, Activity, and Pollutant Removal Efficiency to Cu Exposure
    Wei Zhong, Weiqun Zhao, Jianhui Song · 2020 · International Journal of Environmental Research and Public Health
99. The effect of hydrodynamics on the succession of autotrophic and heterotrophic organisms of biofilms in river ecosystems
    Mei Ling Pan, Xiang Liu, Weixing Ma, Xuan Li, Haizong Li, Cheng Ding, Yuxi Chen, Runze Chen · 2020 · Water Science & Technology
100. Carbon subsidies shift a northern peatland biofilm community towards heterotrophy in low but not high nutrient conditions
     Jordan Michael Myers, Kevin A. Kuehn, Kevin H. Wyatt · 2020 · Freshwater Biology