Genetic code flexibility in microorganisms: novel mechanisms and impact on physiology

Ling, Jiqiang, O'Donoghue, Patrick, Söll, Dieter·2015·Nature Reviews Microbiology
DOI 10.1038/nrmicro3568

Cited by (135)

Items 101–135 of 135

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    Federica De Lise, Roberta Iacono, Andrea Strazzulli, Rosa Giglio, Nicola Curci, Luisa Maurelli, Rosario Avino, Antonio Carandente, Stefano Caliro, Alessandra Tortora et al. · 2021 · Molecules
  3. Synonymous Codon Usages as an Evolutionary Dynamic for Chlamydiaceae
    Zhaocai Li, Wen Ping Hu, Xiaoan Cao, Ping Liu, Youjun Shang, Jizhang Zhou · 2018 · International Journal of Molecular Sciences
  4. Facts and Anomalies to Keep in Perspective When Designing an Artificial Intelligence
    Navin K. Ipe · 2020
  5. A Proteogenomic Pipeline for the Analysis of Protein Biosynthesis Errors in the Human Pathogen Candida albicans
    Inês Correia, Carla Oliveira, Andreia Reis, Ana Rita Guimarães, Susana S. Aveiro, Pedro M. Domingues, Ana Rita Bezerra, Rui Miguel Pinheiro Vitorino, Gabriela Ribeiro Moura, Manuel A. S. Santos · 2024 · Molecular & Cellular Proteomics
  6. tRNA modifications in cancer: from molecular mechanisms to clinical translation
    Hao Cheng, Chi Chun Wong · 2026 · Biomarker Research
  7. Leichte Neucodierung von Selenocystein in der Natur
    Takahito Mukai, Markus Englert, H. James Tripp, Corwin A. Miller, Natalia Ivanova, Edward M. Rubin, Nikos C. Kyrpides, Dieter G. Söll · 2016 · Angewandte Chemie
  8. Biosynthesis and growth
    Byung Hong Kim, Geoffrey Michael Gadd · 2019 · Cambridge University Press eBooks
  9. Suppression of amber stop codons impairs pathogenicity in Salmonella
    Zhihui Lyu, Cierra Wilson, Prajita Paul, Jiqiang Ling · 2024 · FEBS Letters
  10. Natural reward drives the advancement of life
    Owen M. Gilbert · 2020 · Rethinking Ecology
  11. Tryptophan usage by Helicobacter pylori differs among strains
    Diana F. Rojas-Rengifo, Cindy Pamela Ulloa Guerrero, Markus Joppich, Rainer Haas, María del Pilar Delgado, Carlos Jaramillo, Luisa F. Jiménez Soto · 2019 · Scientific Reports
  12. On the origin of the genetic code: a 27-codon hypothetical precursor of an intricate 64-codon intermediate shaped the modern code
    Bernard Dujon · 2021 · Comptes Rendus Biologies
  13. Ribosomal RNA methylation by GidB modulates discrimination of mischarged tRNA
    Zhuo Bi, Yuxiang Chen, I.D. Young, Mohamad T. Dandan, Hemant Joshi, Hong-Wei Su, Yuemeng Chen, Jia-Yao Hong, James S. Fraser, Babak Javid · 2021 · eLife
  14. Zeta CrAss-like Phages, a Separate Phage Family Using a Variety of Adaptive Mechanisms to Persist in Their Hosts
    Igor V. Babkin, Valeria Aleksandrovna Fedorets, Artem Y. Tikunov, Байков Иван Константинович, Elisaveta A. Panina, Тикунова Нина Викторовна · 2025 · International Journal of Molecular Sciences
  15. Single-cell heterogeneity in ribosome levels and protein synthesis during nutrient starvation is driven by cAMP signaling
    Zhihui Lyu, Jacques Augenstreich, Volker Briken, Abhyudai Singh, Matteo Mori, Terence Hwa B, Jiqiang Ling · 2026 · Science Advances
  16. Genetic Code
    Claudia Tanja Mierke · 2020 · Biological and medical physics, biomedical engineering
  17. Identification and Validation of Antidepressant Small Molecules Using Bioinformatics and Mouse Depression Models
    Yajun Qiao, Xingfang Zhang, Hanxi Chen, Xinxin Liang, Juan Guo, Qiannan Wang, Yi Ding, Lixin Wei, Hongtao Bi, Tingting Gao · 2025 · Drug Design Development and Therapy
  18. Assembling a Reference Phylogenomic Tree of Bacteria and Archaea by Summarizing Many Gene Phylogenies
    Qiyun Zhu, Siavash Mirarab · 2022 · Methods in molecular biology
  19. Genomic analysis of fast expanding bacteria reveals new molecular adaptive mechanisms
    Lars Bosshard, Stephan Peischl, Martin Ackermann, Laurent Excoffier · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
  20. Genome-wide screening reveals metabolic regulation of translational fidelity
    Zhihui Lyu, Patricia Villanueva, Liam O’Malley, Parker Murphy, Jiqiang Ling · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
  21. The Selenoproteome as a dynamic response mechanism to oxidative stress in methanogenic communities
    Hugo B.C. Kleikamp, Paola Andrea Palacios, George Papaharalabos, Anders Bentien, Michael Vedel Wegener Kofoed, Jeppe Lund Nielsen · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  22. The Ambiguous Genetic Code of Methanogenic Archaea that Grow on Methylamines
    Katie E. Shalvarjian, Grayson L. Chadwick, Paloma I. Pérez, Philip H. Woods, Victoria J. Orphan, Dipti D. Nayak · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
  23. The Genetic Code, Transfer RNAs and Aminoacyl-tRNA-Synthetases
    Georges N. Cohen · 2016 · Springer eBooks
  24. Natural reward as the fundamental macroevolutionary force
    Owen M. Gilbert · 2019 · arXiv (Cornell University)
  25. T-G-A Deficiency Pattern in Protein-Coding Genes and Its Potential Reason
    Yan-Ting Jin, Dong‐Kai Pu, Haixia Guo, Zixin Deng, Ling‐Ling Chen, Feng‐Biao Guo · 2022 · Frontiers in Microbiology
  26. A felgyorsult fehérje körforgás szerepe a transzlációs hibákkal szembeni alkalmazkodási folyamatokban
    Dorottya Kalapis · 2017
  27. Facts and Anomalies to Keep in Perspective When Designing an Artificial Intelligence
    Navin K. Ipe · 2021
  28. Re-reading the genetic code: The evolutionary potential of frameshifting in time
    Laasya Samhita · 2022 · Journal of Biosciences
  29. A proteogenomic pipeline for the analysis of protein biosynthesis errors in the human pathogen Candida albicans
    Inês Correia, Carla Oliveíra, Andreia Reis, Ana Rita Guimarães, Susana S. Aveiro, Pedro M. Domingues, Ana Rita Bezerra, Rui Miguel Pinheiro Vitorino, Gabriela Moura, Manuel A. S. Santos · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  30. Preventing escape and malfunction of recoded cells due to tRNA base changes
    Anush Chiappino-Pepe, Felix Radford, Bogdan Budnik, Hüseyin Taş, Teresa L. Augustin, Hana M Burgess, Michaël Moret, Azim M. Dharani, Qinmei Zheng, Weicheng Fan et al. · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  31. Ribosomal RNA methylation by GidB modulates discrimination of mischarged tRNA
    Zhuo Bi, Yuxiang Chen, I.D. Young, Hong-Wei Su, Yuemeng Chen, Jia-Yao Hong, James S. Fraser, Babak Javid · 2024 · eLife
  32. tRNA is a molecular thermometer of species' optimal growth temperature
    Sebu Aboma Temesgen, Bakanina Kissanga Grace-Mercure, Basharat Ahmad, Huma Fida, Hao Lin, Li Liu, KUN YU YANG · 2025 · International Journal of Biological Macromolecules
  33. Impact phénotypique des réarrangements chromosomiques et évolution des génomes de levures
    Aubin Fleiss · 2018 · theses.fr (ABES)
  34. Multilayered nucleotide organization reveals purifying selection and host-driven adaptation in CPV and FPV
    Xili Feng, Liwen Xu, C H I Zhang, Jianhua Zhou, Xue Bai · 2026 · BMC Veterinary Research
  35. Ribosomal RNA methylation by GidB modulates discrimination of mischarged tRNA
    Zhuo Bi, Yuxiang Chen, I.D. Young, Mohamad T. Dandan, Hemant Joshi, Hong-Wei Su, Yuemeng Chen, Jia-Yao Hong, James S. Fraser, Babak Javid · 2024 · eLife