Cited by 38Virus-based gene therapy researchNeurofibromatosis and Schwannoma CasesRNA Interference and Gene Delivery

Feasibility of using NF1-GRD and AAV for gene replacement therapy in NF1-associated tumors

Open access
Bai, Ren-Yuan, Esposito, Dominic, Tam, Ada J., McCormick, Frank, Riggins, Gregory J., Wade Clapp, D., Staedtke, Verena·2019·Gene Therapy

Abstract

Neurofibromatosis type 1, including the highly aggressive malignant peripheral nerve sheath tumors (MPNSTs), is featured by the loss of functional neurofibromin 1 (NF1) protein resulting from genetic alterations. A major function of NF1 is suppressing Ras activities, which is conveyed by an intrinsic GTPase-activating protein-related domain (GRD). In this study, we explored the feasibility of restoring Ras GTPase via exogenous expression of various GRD constructs, via gene delivery using a panel of adeno-associated virus (AAV) vectors in MPNST and human Schwann cells (HSCs). We demonstrated that several AAV serotypes achieved favorable transduction efficacies in those cells and a membrane-targeting GRD fused with an H-Ras C-terminal motif (C10) dramatically inhibited the Ras pathway and MPNST cells in a NF1-specific manner. Our results opened up a venue of gene replacement therapy in NF1-related tumors.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1038/s41434-019-0080-9

Cites

2 of 2 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • Several AAV serotypes could inhibit proliferation (i.e. the Ras pathway) in test cells.

    “This led them to demonstrate that several AAV serotypes could inhibit proliferation (i.e. the Ras pathway) in test cells.”

    From Circumventing the packaging limit of AAV-mediated gene replacement therapy for neurological disorders (2022) · cites this paper as [112]

    In the Results section (page unavailable), several AAV serotypes were compared for delivery of an EGFP marker, not for inhibition of proliferation. The paper reports reduced Ras-pathway signaling and growth in MPNST cells using NF1-GRD delivered by AAV-DJ; it does not demonstrate that several serotypes inhibit proliferation. (LLM, conf=0.90)

    Experimental — accuracy not yet measured
  • Bai and colleagues used a panel of AAV vectors to express various GRD constructs in malignant peripheral nerve sheath tumors as well as in human Schwann cells.

    “Bai and colleagues used a panel of AAV vectors to express various GRD constructs in malignant peripheral nerve sheath tumors as well as in human Schwann cells [112].”

    From Circumventing the packaging limit of AAV-mediated gene replacement therapy for neurological disorders (2022) · cites this paper as [112]

    The Results report testing a panel of AAV vectors in MPNST and primary human Schwann cells, but that panel expressed EGFP to measure transduction. The GRD and GRD-C10 constructs were tested using AAV-DJ, not the panel of vectors; the Results also discuss their effects in Schwann cells. Page numbers are unavailable in our copy. (LLM, conf=0.90)

    Experimental — accuracy not yet measured

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Flagged first, then by citations

Research works printed but not linked: 41

  1. [1]Carey JC, Baty BJ, Johnson JP, Morrison T, Skolnick M, Kivlin J. The genetic aspects of neurofibromatosis. Ann N Y Acad Sci 1986; 486: 45– 56. 3105404
  2. [2]Staedtke V, Bai RY, Blakeley JO. Cancer of the Peripheral Nerve in Neurofibromatosis Type 1. Neurotherapeutics 2017; 14: 298– 306. 28349408 PMC5398990
  3. [3]Abramowicz A, Gos M. Neurofibromin in neurofibromatosis type 1 - mutations in NF1gene as a cause of disease. Dev Period Med 2014; 18: 297– 306. 25182393
  4. [4]Ratner N, Miller SJ. A RASopathy gene commonly mutated in cancer: the neurofibromatosis type 1 tumour suppressor. Nat Rev Cancer 2015; 15: 290– 301. 25877329 PMC4822336
  5. [5]Mautner VF, Asuagbor FA, Dombi E, Funsterer C, Kluwe L, Wenzel R Assessment of benign tumor burden by whole-body MRI in patients with neurofibromatosis 1. Neuro Oncol 2008; 10: 593– 8. 18559970 PMC2666233
  6. [6]De Raedt T, Beert E, Pasmant E, Luscan A, Brems H, Ortonne N PRC2 loss amplifies Ras-driven transcription and confers sensitivity to BRD4-based therapies. Nature 2014; 514: 247– 51. 25119042
  7. [7]Rodriguez FJ, Folpe AL, Giannini C, Perry A. Pathology of peripheral nerve sheath tumors: diagnostic overview and update on selected diagnostic problems. Acta Neuropathol 2012; 123: 295– 319. 22327363 PMC3629555
  8. [8]Zou C, Smith KD, Liu J, Lahat G, Myers S, Wang WL Clinical, pathological, and molecular variables predictive of malignant peripheral nerve sheath tumor outcome. Ann Surg 2009; 249: 1014– 22. 19474676
  9. [9]Evans DG, Baser ME, McGaughran J, Sharif S, Howard E, Moran A. Malignant peripheral nerve sheath tumours in neurofibromatosis 1. J Med Genet 2002; 39: 311– 4. 12011145 PMC1735122
  10. [10]Nathwani AC, Davidoff AM, Tuddenham EGD. Advances in Gene Therapy for Hemophilia. Hum Gene Ther 2017; 28: 1004– 1012. 28835123
  11. [11]Guggino WB, Cebotaru L. Adeno-Associated Virus (AAV) gene therapy for cystic fibrosis: current barriers and recent developments. Expert Opin Biol Ther 2017; 17: 1265– 1273. 28657358 PMC5858933
  12. [12]Deverman BE, Ravina BM, Bankiewicz KS, Paul SM, Sah DWY. Gene therapy for neurological disorders: progress and prospects. Nat Rev Drug Discov 2018; 17: 641– 659. 30093643
  13. [13]Lisowski L, Tay SS, Alexander IE. Adeno-associated virus serotypes for gene therapeutics. Curr Opin Pharmacol 2015; 24: 59– 67. 26291407
  14. [14]Kotterman MA, Schaffer DV. Engineering adeno-associated viruses for clinical gene therapy. Nat Rev Genet 2014; 15: 445– 51. 24840552 PMC4393649
  15. [16]Hiatt KK, Ingram DA, Zhang Y, Bollag G, Clapp DW. Neurofibromin GTPase-activating protein-related domains restore normal growth in Nf1−/− cells. J Biol Chem 2001; 276: 7240– 5. 11080503
  16. [17]Dasgupta B, Gutmann DH. Neurofibromin regulates neural stem cell proliferation, survival, and astroglial differentiation in vitro and in vivo. J Neurosci 2005; 25: 5584– 94. 15944386 PMC6724981
  17. [18]Morcos P, Thapar N, Tusneem N, Stacey D, Tamanoi F. Identification of neurofibromin mutants that exhibit allele specificity or increased Ras affinity resulting in suppression of activated ras alleles. Mol Cell Biol 1996; 16: 2496– 503. 8628317 PMC231238
  18. [19]Bai RY, Staedtke V, Aprhys CM, Gallia GL, Riggins GJ. Antiparasitic mebendazole shows survival benefit in 2 preclinical models of glioblastoma multiforme. Neuro Oncol 2011; 13: 974– 82. 21764822 PMC3158014
  19. [20]Bai RY, Dieter P, Peschel C, Morris SW, Duyster J. Nucleophosmin-anaplastic lymphoma kinase of large-cell anaplastic lymphoma is a constitutively active tyrosine kinase that utilizes phospholipase C-gamma to mediate its mitogenicity. Mol Cell Biol 1998; 18: 6951– 61. 9819383 PMC109278
  20. [21]Bodempudi V, Yamoutpoor F, Pan W, Dudek AZ, Esfandyari T, Piedra M Ral overactivation in malignant peripheral nerve sheath tumors. Mol Cell Biol 2009; 29: 3964– 74. 19414599 PMC2704746
  21. [22]Reuss DE, Mucha J, Hagenlocher C, Ehemann V, Kluwe L, Mautner V Sensitivity of malignant peripheral nerve sheath tumor cells to TRAIL is augmented by loss of NF1 through modulation of MYC/MAD and is potentiated by curcumin through induction of ROS. PLoS One 2013; 8: e57152. 23437333 PMC3578816
  22. [23]Sun D, Tainsky MA, Haddad R. Oncogene Mutation Survey in MPNST Cell Lines Enhances the Dominant Role of Hyperactive Ras in NF1 Associated Pro-Survival and Malignancy. Transl Oncogenomics 2012; 5: 1– 7. 22346343 PMC3273949
  23. [24]Gao GP, Alvira MR, Wang L, Calcedo R, Johnston J, Wilson JM. Novel adeno-associated viruses from rhesus monkeys as vectors for human gene therapy. Proc Natl Acad Sci U S A 2002; 99: 11854– 9. 12192090 PMC129358
  24. [25]Cearley CN, Wolfe JH. Transduction characteristics of adeno-associated virus vectors expressing cap serotypes 7, 8, 9, and Rh10 in the mouse brain. Mol Ther 2006; 13: 528– 37. 16413228
  25. [26]Cearley CN, Vandenberghe LH, Parente MK, Carnish ER, Wilson JM, Wolfe JH. Expanded repertoire of AAV vector serotypes mediate unique patterns of transduction in mouse brain. Mol Ther 2008; 16: 1710– 8. 18714307 PMC3056207
  26. [27]Mays LE, Wilson JM. Identification of the murine AAVrh32.33 capsid-specific CD8+ T cell epitopes. J Gene Med 2009; 11: 1095– 102. 19777488 PMC10694856
  27. [28]Grimm D, Lee JS, Wang L, Desai T, Akache B, Storm TA In vitro and in vivo gene therapy vector evolution via multispecies interbreeding and retargeting of adeno-associated viruses. J Virol 2008; 82: 5887– 911. 18400866 PMC2395137
  28. [29]Wang Z, Ma HI, Li J, Sun L, Zhang J, Xiao X. Rapid and highly efficient transduction by double-stranded adeno-associated virus vectors in vitro and in vivo. Gene Ther 2003; 10: 2105– 11. 14625564
  29. [30]Zhu Y, Ghosh P, Charnay P, Burns DK, Parada LF. Neurofibromas in NF1: Schwann cell origin and role of tumor environment. Science 2002; 296: 920– 2. 11988578 PMC3024710
  30. [31]Hancock JF, Cadwallader K, Paterson H, Marshall CJ. A CAAX or a CAAL motif and a second signal are sufficient for plasma membrane targeting of ras proteins. EMBO J 1991; 10: 4033– 9. 1756714 PMC453151
  31. [33]Choy E, Chiu VK, Silletti J, Feoktistov M, Morimoto T, Michaelson D Endomembrane trafficking of ras: the CAAX motif targets proteins to the ER and Golgi. Cell 1999; 98: 69– 80. 10412982
  32. [34]Weinmann J, Grimm D. Next-generation AAV vectors for clinical use: an ever-accelerating race. Virus Genes 2017; 53: 707– 713. 28762205
  33. [35]Mao Y, Wang X, Yan R, Hu W, Li A, Wang S Single point mutation in adeno-associated viral vectors -DJ capsid leads to improvement for gene delivery in vivo. BMC Biotechnol 2016; 16: 1. 26729248 PMC4700607
  34. [36]Hoyng SA, De Winter F, Gnavi S, van Egmond L, Attwell CL, Tannemaat MR Gene delivery to rat and human Schwann cells and nerve segments: a comparison of AAV 1–9 and lentiviral vectors. Gene Ther 2015; 22: 767– 80. 25938190
  35. [37]Scheffzek K, Shivalingaiah G. Ras-Specific GTPase-Activating Proteins-Structures, Mechanisms, and Interactions. Cold Spring Harb Perspect Med 2018. PMC6396337 30104198
  36. [38]Ahmadian MR, Wiesmuller L, Lautwein A, Bischoff FR, Wittinghofer A. Structural differences in the minimal catalytic domains of the GTPase-activating proteins p120GAP and neurofibromin. J Biol Chem 1996; 271: 16409– 15. 8663212
  37. [39]Scheffzek K, Ahmadian MR, Wiesmuller L, Kabsch W, Stege P, Schmitz F Structural analysis of the GAP-related domain from neurofibromin and its implications. EMBO J 1998; 17: 4313– 27. 9687500 PMC1170765
  38. [40]Stowe IB, Mercado EL, Stowe TR, Bell EL, Oses-Prieto JA, Hernandez H A shared molecular mechanism underlies the human rasopathies Legius syndrome and Neurofibromatosis-1. Genes Dev 2012; 26: 1421– 6. 22751498 PMC3403010
  39. [41]Hirata Y, Brems H, Suzuki M, Kanamori M, Okada M, Morita R Interaction between a Domain of the Negative Regulator of the Ras-ERK Pathway, SPRED1 Protein, and the GTPase-activating Protein-related Domain of Neurofibromin Is Implicated in Legius Syndrome and Neurofibromatosis Type 1. J Biol Chem 2016; 291: 3124– 34. 26635368 PMC4751360
  40. [42]Dunzendorfer-Matt T, Mercado EL, Maly K, McCormick F, Scheffzek K. The neurofibromin recruitment factor Spred1 binds to the GAP related domain without affecting Ras inactivation. Proc Natl Acad Sci U S A 2016; 113: 7497– 502. 27313208 PMC4941445
  41. [43]Chavez A, Scheiman J, Vora S, Pruitt BW, Tuttle M, E PRI Highly efficient Cas9-mediated transcriptional programming. Nat Methods 2015; 12: 326– 8. 25730490 PMC4393883

Cited by

Sorted by citations

Authors
Bai, R.-Y., Esposito, D., Tam, A. J., McCormick, F., Riggins, G. J., Wade Clapp, D., & Staedtke, V.
Affiliations
  • Johns Hopkins University (US)
  • Frederick National Laboratory for Cancer Research (US)
Corresponding author
  • Bai, Ren-Yuan
  • Staedtke, Verena
Venue
Gene Therapy
Published
2019-05-24
Volume
26
Issue
6
Pages
277-286
ISSN
  • 0969-7128 (ISSN-L)
  • 1476-5462
OpenAlex
W2945528810
Cited by
38
References
2
Citations by year
2026: 3 · 2025: 8 · 2024: 6 · 2023: 1 · 2022: 9 · 2021: 5 · 2020: 5 · 2019: 1
FWCI
3.01
Type
journal article
Language
en
Open access
Locations
  • Gene Therapy (publishedVersion)
  • PubMed (publishedVersion)
  • Europe PMC (PubMed Central) (acceptedVersion)
  • PubMed Central (acceptedVersion)
  • eScholarship (California Digital Library) (submittedVersion)
  • IUScholarWorks (Indiana University) (submittedVersion)
  • Purdue University Indianapolis (Indiana University) (submittedVersion)
  • PMC
Funders
  • U.S. Department of Health & Human Services | NIH | National Cancer Institute (1R03CA178118-01A1, 1K08CA230179-01)
  • United States Department of Defense | United States Army | U.S. Army Research, Development and Engineering Command | Army Research Office (W81XWH1810236)
  • Children's Tumor Foundation (2016A-05-008)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Virus-based gene therapy research
  • Health Sciences › Medicine › Neurology › Neurofibromatosis and Schwannoma Cases
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Interference and Gene Delivery
Keywords
neurofibromatosis type 1, malignant peripheral nerve sheath tumor, neurofibromin 1, adeno-associated virus vectors, gene replacement therapy, Schwann cells, AAV serotypes, transduction efficiency
MeSH terms
Protein Domains, Dependovirus, Cell Line, Cells, Cultured, Feasibility Studies, Genetic Vectors, Humans, Neurofibromatosis 1, Schwann Cells, Genetic Therapy, ras Proteins, Neurofibromin 1, Cell Line, Tumor

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review