Human cellular model systems of β-thalassemia enable in-depth analysis of disease phenotype
Open accessPublished version of a preprint
Abstract
β-thalassemia is a prevalent genetic disorder causing severe anemia due to defective erythropoiesis, with few treatment options. Studying the underlying molecular defects is impeded by paucity of suitable patient material. In this study we create human disease cellular model systems for β-thalassemia by gene editing the erythroid line BEL-A, which accurately recapitulate the phenotype of patient erythroid cells. We also develop a high throughput compatible fluorometric-based assay for evaluating severity of disease phenotype and utilize the assay to demonstrate that the lines respond appropriately to verified reagents. We next use the lines to perform extensive analysis of the altered molecular mechanisms in β-thalassemia erythroid cells, revealing upregulation of a wide range of biological pathways and processes along with potential novel targets for therapeutic investigation. Overall, the lines provide a sustainable supply of disease cells as research tools for identifying therapeutic targets and as screening platforms for new drugs and reagents.
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Highly accurate protein structure prediction with AlphaFold
Jumper, J., Evans, R., Pritzel, A., Green, T., Figurnov, M., Ronneberger, O., Tunyasuvunakool, K., Bates, R., Žídek, A., Potapenko, A., et al. (2021) · Nature · doi:10.1038/s41586-021-03819-2 · Cited by 43,764 · see citing works
BCL11A enhancer dissection by Cas9-mediated in situ saturating mutagenesis
Canver, M. C., Smith, E. C., Sher, F., Pinello, L., Sanjana, N. E., Shalem, O., Chen, D. D., Schupp, P. G., Vinjamur, D. S., Garcia, S. P., et al. (2015) · Nature · doi:10.1038/nature15521 · Cited by 886 · see citing works
Fibach, E., Burke, L., Schechter, A., Noguchi, C., & Rodgers, G. (1993) · Blood · doi:10.1182/blood.v81.6.1630.1630 · Cited by 102 · see citing works
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- Authors
- Daniels, D. E., Ferrer-Vicens, I., Hawksworth, J., Andrienko, T. N., Finnie, E. M., Bretherton, N. S., Ferguson, D. C. J., Oliveira, A. S. F., Szeto, J.-Y. A., Wilson, M. C., Brewin, J. N., & Frayne, J.
- Affiliations
- University of Bristol (GB)
- King's College London (GB)
- Corresponding author
- Frayne, Jan
- ORCID
- Venue
- Nature Communications
- Published
- 2023-10-06
- Volume
- 14
- Issue
- 1
- Pages
- 6260-6260
- ISSN
- 2041-1723 (ISSN-L)
- PMC
- PMC10558456
- OpenAlex
- W4387396938
- Cited by
- 8
- References
- 3
- Citations by year
- 2026: 2 · 2025: 3 · 2024: 2 · 2023: 1
- FWCI
- 1.39
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Locations
- Nature Communications (publishedVersion, cc-by)
- bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- RePEc: Research Papers in Economics (submittedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Bristol Research (University of Bristol) (submittedVersion, cc-by)
- Explore Bristol Research (submittedVersion, cc-by)
- Funders
- RCUK | Medical Research Council (MR/S021140/1)
- Wellcome Trust (209739/Z/17/Z)
- RCUK | Biotechnology and Biological Sciences Research Council (BB/R016445/1, BB/X511195/1)
- RCUK | Engineering and Physical Sciences Research Council (EP/M022609/1)
- Global Challenges Research Fund via the University of Bristol’s GCRF and Newton Fund Consolidation Account
- Topics
- Health Sciences › Medicine › Genetics › Hemoglobinopathies and Related Disorders
- Health Sciences › Medicine › Hematology › Iron Metabolism and Disorders
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Hemoglobin structure and function
- Keywords
- beta-thalassemia, erythroid cells, genome editing, disease phenotypes, fluorometric assay, high-throughput screening, therapeutic target, drug screening, erythropoiesis
- MeSH terms
- Erythropoiesis, Humans, Phenotype, beta-Thalassemia, Erythroid Cells
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