Cited by 190Urinary Tract Infections ManagementEscherichia coli research studiesBladder and Urothelial Cancer Treatments

Urinary tract infections: pathogenesis, host susceptibility and emerging therapeutics

Open access
Timm, Morgan R., Russell, Seongmi K., Hultgren, Scott J.·2025·Nature Reviews Microbiology

Abstract

Urinary tract infections (UTIs), which include any infection of the urethra, bladder or kidneys, account for an estimated 400 million infections and billions of dollars in health-care spending per year. The most common bacterium implicated in UTI is uropathogenic Escherichia coli, but diverse pathogens including Klebsiella, Enterococcus, Pseudomonas, Staphylococcus and even yeast such as Candida species can also cause UTIs. UTIs occur in both women and men and in both healthy and immunocompromised patients. However, certain patient factors predispose to disease: for example, female sex, history of prior UTI, or the presence of a urinary catheter or other urinary tract abnormality. The current clinical paradigm for the treatment of UTIs involves the use of antibiotics. Unfortunately, the efficacy of this approach is dwindling as the prevalence of antimicrobial resistance rises among UTI isolates, and the immense quantity of antibiotics prescribed annually for these infections contributes to the emergence of resistant pathogens. Therefore, there is an urgent need for new antibiotics and non-antibiotic treatment and prevention strategies. In this Review, we discuss how recent studies of bacterial pathogenesis, recurrence, persistence, host-pathogen interactions and host susceptibility factors have elucidated new and promising targets for the treatment and prevention of UTIs.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1038/s41579-024-01092-4

Cites

2 of 2 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • Antibiotic resistance in UTIs is increasing owing to the worldwide spread of such infections and the widespread use of antibiotics as the gold standard therapy for UTIs.

    “Antibiotic resistance in UTIs is increasing owing to two major factors: the worldwide spread of such infections and the widespread use of antibiotics as the gold standard therapy for UTIs [17].”

    From Vaginal microbiota and urinary tract infections in women: the protective role of vaginal lactobacilli in counteracting urinary tract infections occurrence and recurrence (2026) · cites this paper as [17]

    The Introduction says antibiotic resistance in UTIs is rising, and the Abstract says the large quantity of antibiotics prescribed for UTIs contributes to resistant pathogens. The Introduction also describes UTIs as a global health problem, but the paper does not identify the worldwide spread of infections as a cause of rising resistance. Page numbers were not provided in our copy. (LLM, conf=0.88)

    Experimental — accuracy not yet measured

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Flagged first, then by citations

Research works printed but not linked: 168

  1. [1]Yang X Disease burden and long-term trends of urinary tract infections: a worldwide report. Front. Public Health 10, 888205 (2022). 35968451 PMC9363895
  2. [2]Brumbaugh AR & Mobley HLT Preventing urinary tract infection: progress toward an effective Escherichia coli vaccine. Expert Rev. Vaccines 11, 663– 676 (2012). 22873125 PMC3498450
  3. [3]Foxman B Epidemiology of urinary tract infections: incidence, morbidity, and economic costs. Am. J. Med 113, 5– 13 (2002). 12113866
  4. [4]Wagenlehner F, Wullt B, Ballarini S, Zingg D & Naber KG Social and economic burden of recurrent urinary tract infections and quality of life: a patient web-based study (GESPRIT). Expert Rev. Pharmacoecon. Outcomes Res 18, 107– 117 (2018). 28737469
  5. [7]Vallejo-Torres L Cost of hospitalised patients due to complicated urinary tract infections: a retrospective observational study in countries with high prevalence of multidrug-resistant Gram-negative bacteria: the COMBACTE-MAGNET, RESCUING study. BMJ Open 8, e020251 (2018). PMC5898316 29654026
  6. [8]Carreno JJ Longitudinal, nationwide, cohort study to assess incidence, outcomes, and costs associated with complicated urinary tract infection. Open Forum Infect. Dis 6, ofz446 (2019). PMC6956781 31951222
  7. [9]Wagenlehner FME Epidemiology, definition and treatment of complicated urinary tract infections. Nat. Rev. Urol 17, 586– 600 (2020). 32843751
  8. [10]Aslam S, Albo M & Brubaker L Recurrent urinary tract infections in adult women. JAMA 323, 658– 659 (2020). 31995139
  9. [11]Schwartz DJ, Chen SL, Hultgren SJ & Seed PC Population dynamics and niche distribution of uropathogenic Escherichia coli during acute and chronic urinary tract infection. Infect. Immun 79, 4250– 4259 (2011). 21807904 PMC3187256
  10. [12]Anderson GG Intracellular bacterial biofilm-like pods in urinary tract infections. Science 301, 105– 107 (2003). 12843396
  11. [13]Mulvey MA, Schilling JD & Hultgren SJ Establishment of a persistent Escherichia coli reservoir during the acute phase of a bladder infection. Infect. Immun 69, 4572– 4579 (2001). 11402001 PMC98534
  12. [15]De Nisco NJ Direct detection of tissue-resident bacteria and chronic inflammation in the bladder wall of postmenopausal women with recurrent urinary tract infection. J. Mol. Biol 431, 4368– 4379 (2019). 31002774 PMC6801050 This study provides the first direct visualization of intracellular bacterial communities within human bladders, confirming decades of work in mouse models.
  13. [16]Schreiber HL Bacterial virulence phenotypes of Escherichia coli and host susceptibility determine risk for urinary tract infections. Sci. Transl. Med 9, eaaf1283 (2017). PMC5653229 28330863
  14. [17]Potter RF Uncharacterized and lineage-specific accessory genes within the Proteus mirabilis pan-genome landscape. mSystems 8, e00159– 23 (2023). 37341494 PMC10469602
  15. [18]Sharon BM Genetic and functional enrichments associated with Enterococcus faecalis isolated from the urinary tract. mBio 14, e02515– e02523 (2023). 37962362 PMC10746210
  16. [19]Ambite I Molecular determinants of disease severity in urinary tract infection. Nat. Rev. Urol 18, 468– 486 (2021). 34131331 PMC8204302
  17. [20]Bunduki GK Virulence factors and antimicrobial resistance of uropathogenic Escherichia coli (UPEC) isolated from urinary tract infections: a systematic review and meta-analysis. BMC Infect. Dis 21, 753 (2021). 34348646 PMC8336361
  18. [21]Klein RD & Hultgren SJ Urinary tract infections: microbial pathogenesis, host–pathogen interactions and new treatment strategies. Nat. Rev. Microbiol 18, 211– 226 (2020). 32071440 PMC7942789
  19. [22]Wurpel DJ, Beatson SA, Totsika M, Petty NK & Schembri MA Chaperone-usher fimbriae of Escherichia coli. PLoS ONE 8, e52835 (2013). 23382825 PMC3559732
  20. [23]Armbruster CE, Mobley HLT & Pearson MM Pathogenesis of Proteus mirabilis infection. EcoSal Plus 10.1128/ecosalplus.ESP-0009-2017 (2018). PMC5880328 29424333 · DOI
  21. [24]Fonseca-Martínez SA, Martínez-Vega RA, Farfán-García AE, González Rugeles CI & Criado-Guerrero LY Association between uropathogenic Escherichia coli virulence genes and severity of infection and resistance to antibiotics. Infect. Drug Resist 16, 3707– 3718 (2023). 37333681 PMC10275372
  22. [25]Rosen DA Molecular variations in Klebsiella pneumoniae and Escherichia coli FimH affect function and pathogenesis in the urinary tract. Infect. Immun 76, 3346– 3356 (2008). 18474655 PMC2446687
  23. [26]Schwartz L, de Dios Ruiz-Rosado J, Stonebrook E, Becknell B & Spencer JD Uropathogen and host responses in pyelonephritis. Nat. Rev. Nephrol 19, 658– 671 (2023). 37479904 PMC10913074
  24. [27]Spaulding CN Selective depletion of uropathogenic E. coli from the gut by a FimH antagonist. Nature 546, 528– 532 (2017). 28614296 PMC5654549
  25. [28]Gato E Kpi, a chaperone-usher pili system associated with the worldwide-disseminated high-risk clone Klebsiella pneumoniae ST-15. Proc. Natl Acad. Sci. USA 117, 17249– 17259 (2020). 32641516 PMC7382220
  26. [29]Neilands JB Siderophores: structure and function of microbial iron transport compounds. J. Biol. Chem 270, 26723– 26726 (1995). 7592901
  27. [30]Robinson AE, Heffernan JR & Henderson JP The iron hand of uropathogenic Escherichia coli: the role of transition metal control in virulence. Future Microbiol 13, 745– 756 (2018). 29870278 PMC6161082
  28. [31]Shea AE, Frick-Cheng AE, Smith SN & Mobley HLT Phenotypic assessment of clinical Escherichia coli isolates as an indicator for uropathogenic potential. mSystems 7, e0082722 (2022). 36445110 PMC9765037
  29. [32]Frick-Cheng AE Ferric citrate uptake is a virulence factor in uropathogenic Escherichia coli. mBio 13, e01035– 22 (2022). 35546538 PMC9239202
  30. [33]Gonzalez-Ferrer S Finding order in the chaos: outstanding questions in Klebsiella pneumoniae pathogenesis. Infect. Immun 89, e00693– 20 (2021). 33558323 PMC8090965
  31. [34]Hung C Escherichia coli biofilms have an organized and complex extracellular matrix structure. mBio 4, e00645– 13 (2013). 24023384 PMC3774191
  32. [35]Stahlhut SG, Struve C, Krogfelt KA & Reisner A Biofilm formation of Klebsiella pneumoniae on urethral catheters requires either type 1 or type 3 fimbriae. FEMS Immunol. Med. Microbiol 65, 350– 359 (2012). 22448614 PMC3410544
  33. [36]Newman JW, Floyd RV & Fothergill JL The contribution of Pseudomonas aeruginosa virulence factors and host factors in the establishment of urinary tract infections. FEMS Microbiol. Lett 10.1093/femsle/fnx124 (2017). 28605563 · DOI
  34. [37]Conover MS Metabolic requirements of Escherichia coli in intracellular bacterial communities during urinary tract infection pathogenesis. mBio 7, e00104– 16 (2016). 27073089 PMC4959519
  35. [38]Pang Y Bladder epithelial cell phosphate transporter inhibition protects mice against uropathogenic Escherichia coli infection. Cell Rep 39, 110698 (2022). 35443182
  36. [39]Beebout CJ Uropathogenic Escherichia coli subverts mitochondrial metabolism to enable intracellular bacterial pathogenesis in urinary tract infection. Nat. Microbiol 7, 1348– 1360 (2022). 35995841 PMC9756876 This study provides insights into how intracellular uropathogenic E. coli bacteria subvert the epithelial exfoliation response to prevent clearance of infection.
  37. [40]Jafari NV & Rohn JL An immunoresponsive three-dimensional urine-tolerant human urothelial model to study urinary tract infection. Front. Cell. Infect. Microbiol 13, 1128132 (2023). 37051302 PMC10083561 The study reports an in vitro, urine-tolerant human bladder epithelial model capable of supporting intracellular bacterial communities, with the potential to rapidly expand our understanding of the molecular mechanisms of IBC formation.
  38. [41]Flores C A human urothelial microtissue model reveals shared colonization and survival strategies between uropathogens and commensals. Sci. Adv 9, eadi9834 (2023). PMC10631729 37939183
  39. [42]Saleem Z Point prevalence surveys of health-care-associated infections: a systematic review. Pathog. Glob. Health 113, 191– 205 (2019). 31215326 PMC6758614
  40. [44]Flores-Mireles AL Fibrinogen release and deposition on urinary catheters placed during urologic procedures. J. Urol 196, 416– 421 (2016). 26827873 PMC4965327
  41. [45]Flores-Mireles AL, Pinkner JS, Caparon MG & Hultgren SJ EbpA vaccine antibodies block binding of Enterococcus faecalis to fibrinogen to prevent catheter-associated bladder infection in mice. Sci. Transl. Med 6, 254ra127 (2014). PMC4365981 25232179
  42. [46]Di Venanzio G Urinary tract colonization is enhanced by a plasmid that regulates uropathogenic Acinetobacter baumannii chromosomal genes. Nat. Commun 10, 2763 (2019). 31235751 PMC6591400
  43. [47]Tamadonfar KO Structure-function correlates of fibrinogen binding by Acinetobacter adhesins critical in catheter-associated urinary tract infections. Proc. Natl Acad. Sci. USA 120, e2212694120 (2023). 36652481 PMC9942807
  44. [48]La Bella AA The catheterized bladder environment promotes Efg1- and Als1-dependent Candida albicans infection. Sci. Adv 9, eade7689 (2023). PMC9984171 36867691
  45. [49]Walker JN Catheterization alters bladder ecology to potentiate Staphylococcus aureus infection of the urinary tract. Proc. Natl Acad. Sci. USA 114, E8721– E8730 (2017). 28973850 PMC5642702
  46. [50]Walker JN High-resolution imaging reveals microbial biofilms on patient urinary catheters despite antibiotic administration. World J. Urol 38, 2237– 2245 (2020). 31792577 PMC7778452
  47. [51]Guiton PS, Hannan TJ, Ford B, Caparon MG & Hultgren SJ Enterococcus faecalis overcomes foreign body-mediated inflammation to establish urinary tract infections. Infect. Immun 81, 329– 339 (2013). 23132492 PMC3536162
  48. [52]Hazen JE, Di Venanzio G, Hultgren SJ & Feldman MF Catheterization of mice triggers resurgent urinary tract infection seeded by a bladder reservoir of Acinetobacter baumannii. Sci. Transl. Med 15, eabn8134 (2023). PMC10464790 36630484
  49. [53]Armbruster CE, Brauer AL, Humby MS, Shao J & Chakraborty S Prospective assessment of catheter-associated bacteriuria clinical presentation, epidemiology, and colonization dynamics in nursing home residents. JCI Insight 6, e144775 (2021). 34473649 PMC8525589
  50. [54]Nye TM Microbial co-occurrences on catheters from long-term catheterized patients. Nat. Commun 15, 61 (2024). 38168042 PMC10762172
  51. [55]Gaston JR Enterococcus faecalis polymicrobial interactions facilitate biofilm formation, antibiotic recalcitrance, and persistent colonization of the catheterized urinary tract. Pathogens 9, 835 (2020). 33066191 PMC7602121
  52. [56]Hou J Enhanced antibiotic tolerance of an in vitro multispecies uropathogen biofilm model, useful for studies of catheter-associated urinary tract infections. Microorganisms 10, 1207 (2022). 35744727 PMC9227968
  53. [57]Li L, Li Y, Yang J, Xie X & Chen H The immune responses to different uropathogens call individual interventions for bladder infection. Front. Immunol 13, 953354 (2022). 36081496 PMC9445553
  54. [58]Chromek M The antimicrobial peptide cathelicidin protects the urinary tract against invasive bacterial infection. Nat. Med 12, 636– 641 (2006). 16751768
  55. [59]Valore EV Human beta-defensin-1: an antimicrobial peptide of urogenital tissues. J. Clin. Invest 101, 1633– 1642 (1998). 9541493 PMC508744
  56. [60]Zhao J, Wang Z, Chen X, Wang J & Li J Effects of intravesical liposome-mediated human beta-defensin-2 gene transfection in a mouse urinary tract infection model. Microbiol. Immunol 55, 217– 223 (2011). 21272062
  57. [61]Rosen AL Secretory leukocyte protease inhibitor protects against severe urinary tract infection in mice. mBio 15, e02554– 23 (2024). 38270443 PMC10865866
  58. [62]James-Ellison MY, Roberts R, Verrier-Jones K, Williams JD & Topley N Mucosal immunity in the urinary tract: changes in sIgA, FSC and total IgA with age and in urinary tract infection. Clin. Nephrol 48, 69– 78 (1997). 9285142
  59. [63]Behzadi E & Behzadi P The role of Toll-like receptors (TLRs) in urinary tract infections (UTIs). Cent. Eur. J. Urol 69, 404– 410 (2016). PMC5260452 28127459
  60. [64]Zhang D A Toll-like receptor that prevents infection by uropathogenic bacteria. Science 303, 1522– 1526 (2004). 15001781
  61. [65]Abraham SN & Miao Y The nature of immune responses to urinary tract infections. Nat. Rev. Immunol 15, 655– 663 (2015). 26388331 PMC4926313
  62. [66]Kuhn HW, Hreha TN & Hunstad DA Immune defenses in the urinary tract. Trends Immunol 44, 701– 711 (2023). 37591712 PMC10528756
  63. [67]Lacerda Mariano L & Ingersoll MA The immune response to infection in the bladder. Nat. Rev. Urol 17, 439– 458 (2020). 32661333 This in-depth review of the immune response to urinary tract infections covers intrinsic, innate and adaptive defences in the bladder.
  64. [68]Sarkissian CA, Alteri CJ & Mobley HLT UTI patients have pre-existing antigen-specific antibody titers against UTI vaccine antigens. Vaccine 37, 4937– 4946 (2019). 31320216 PMC6812515
  65. [69]Hawas S, Vagenas D, Haque A & Totsika M Bladder-draining lymph nodes support germinal center B cell responses during urinary tract infection in mice. Infect. Immun 91, e00317– 23 (2023). 37882531 PMC10652902
  66. [70]Silverman JA, Schreiber HL, Hooton TM & Hultgren SJ From physiology to pharmacy: developments in the pathogenesis and treatment of recurrent urinary tract infections. Curr. Urol. Rep 14, 448– 456 (2013). 23832844 PMC3797163
  67. [71]O’Brien VP, Dorsey DA, Hannan TJ & Hultgren SJ Host restriction of Escherichia coli recurrent urinary tract infection occurs in a bacterial strain-specific manner. PLoS Pathog 14, e1007457 (2018). 30543708 PMC6292575
  68. [72]Wu J A highly polarized TH2 bladder response to infection promotes epithelial repair at the expense of preventing new infections. Nat. Immunol 21, 671– 683 (2020). 32424366 PMC7480508 This study examines the role of adaptive immunity in bladder remodelling and its effect on subsequent recurrent infections.
  69. [73]Rousseau M, Lacerda Mariano L, Canton T & Ingersoll MA Tissue-resident memory T cells mediate mucosal immunity to recurrent urinary tract infection. Sci. Immunol 8, eabn4332 (2023). 37235683
  70. [74]Butler CC, Hawking MKD, Quigley A & McNulty CAM Incidence, severity, help seeking, and management of uncomplicated urinary tract infection: a population-based survey. Br. J. Gen. Pract 65, e702– e707 (2015). 26412847 PMC4582883
  71. [75]Vihta K-D Trends over time in Escherichia coli bloodstream infections, urinary tract infections, and antibiotic susceptibilities in Oxfordshire, UK, 1998–2016: a study of electronic health records. Lancet Infect. Dis 18, 1138– 1149 (2018). 30126643 PMC7612540
  72. [76]Luo Y Similarity and divergence of phylogenies, antimicrobial susceptibilities, and virulence factor profiles of Escherichia coli isolates causing recurrent urinary tract infections that persist or result from reinfection. J. Clin. Microbiol 50, 4002– 4007 (2020). PMC3502954 23035197
  73. [77]Sharma K Early invasion of the bladder wall by solitary bacteria protects UPEC from antibiotics and neutrophil swarms in an organoid model. Cell Rep 36, 109351 (2021). 34289360
  74. [78]Mysorekar IU & Hultgren SJ Mechanisms of uropathogenic Escherichia coli persistence and eradication from the urinary tract. Proc. Natl Acad. Sci. USA 103, 14170– 14175 (2006). 16968784 PMC1564066
  75. [79]Jantunen ME, Saxén H, Lukinmaa S, Ala-Houhala M & Siitonen A Genomic identity of pyelonephritogenic Escherichia coli isolated from blood, urine and faeces of children with urosepsis. J. Med. Microbiol 50, 650– 652 (2001). 11444777
  76. [80]Magruder M Gut uropathogen abundance is a risk factor for development of bacteriuria and urinary tract infection. Nat. Commun 10, 5521 (2019). 31797927 PMC6893017
  77. [81]Thänert R Comparative genomics of antibiotic-resistant uropathogens implicates three routes for recurrence of urinary tract infections. mBio 10, e01977– 19 (2019). 31455657 PMC6712402
  78. [83]Worby CJ, Olson BS, Dodson KW, Earl AM & Hultgren SJ Establishing the role of the gut microbiota in susceptibility to recurrent urinary tract infections. J. Clin. Invest 132, e158497 (2022). 35229729 PMC8884912
  79. [84]Lewis AL & Gilbert NM Roles of the vagina and the vaginal microbiota in urinary tract infection: evidence from clinical correlations and experimental models. GMS Infect. Dis 8, Doc02 (2020). PMC7186798 32373427
  80. [85]Brannon JR Invasion of vaginal epithelial cells by uropathogenic Escherichia coli. Nat. Commun 11, 2803 (2020). 32499566 PMC7272400
  81. [86]Kline KA, Schwartz DJ, Lewis WG, Hultgren SJ & Lewis AL Immune activation and suppression by group B Streptococcus in a murine model of urinary tract infection. Infect. Immun 79, 3588– 3595 (2011). 21690238 PMC3165466
  82. [87]Gilbert NM, O’Brien VP & Lewis AL Transient microbiota exposures activate dormant Escherichia coli infection in the bladder and drive severe outcomes of recurrent disease. PLoS Pathog 13, e1006238 (2017). 28358889 PMC5373645
  83. [88]O’Brien VP, Lewis AL & Gilbert NM Bladder exposure to Gardnerella activates host pathways necessary for Escherichia coli recurrent UTI. Front. Cell. Infect. Microbiol 11, 788229 (2021). 34938672 PMC8685330
  84. [89]Gilbert NM Gardnerella exposures alter bladder gene expression and augment uropathogenic Escherichia coli urinary tract infection in mice. Front. Cell. Infect. Microbiol 12, 909799 (2022). 35782131 PMC9245024 This study provides mechanistic insights into the significance of the common vaginal bacterium G. vaginalis in the bladder.
  85. [90]Song CH Lactobacillus crispatus limits bladder uropathogenic E. coli infection by triggering a host type I interferon response. Proc. Natl Acad. Sci. USA 119, e2117904119 (2022). 35939684 PMC9388105 This study explores how the most commonly reported member of the urobiome, L. crispatus, may provide protection from urinary tract infection.
  86. [91]Yu J Genetic polymorphisms associated with UTI in children and adults: a systematic review and meta-analysis. Am. J. Obstet. Gynecol 230, 600– 609.e3 (2023). 38128862
  87. [92]Deltourbe L, Lacerda Mariano L, Hreha TN, Hunstad DA & Ingersoll MA The impact of biological sex on diseases of the urinary tract. Mucosal Immunol 15, 857– 866 (2022). 35869147 PMC9305688
  88. [93]Ligon MM, Joshi CS, Fashemi BE, Salazar AM & Mysorekar IU Effects of aging on urinary tract epithelial homeostasis and immunity. Dev. Biol 493, 29– 39 (2023). 36368522 PMC11463731
  89. [94]Hannan TJ, Mysorekar IU, Hung CS, Isaacson-Schmid ML & Hultgren SJ Early severe inflammatory responses to uropathogenic E. coli predispose to chronic and recurrent urinary tract infection. PLoS Pathog 6, e1001042 (2010). 20811584 PMC2930321
  90. [95]O’Brien VP A mucosal imprint left by prior Escherichia coli bladder infection sensitizes to recurrent disease. Nat. Microbiol 2, 16196 (2016). 27798558 PMC5308540
  91. [96]Yu L Mucosal infection rewires TNFα signaling dynamics to skew susceptibility to recurrence. eLife 8, e46677 (2019). 31429405 PMC6701943
  92. [97]Russell SK Uropathogenic Escherichia coli infection-induced epithelial trained immunity impacts urinary tract disease outcome. Nat. Microbiol 8, 875– 888 (2023). 37037942 PMC10159856 This study reveals how a history of prior infection alters immune signalling through epigenetic remodelling of the bladder epithelium, explaining why prior UTI is the most significant risk factor for future UTI.
  93. [98]Elling R Genetic models reveal cis and trans immune-regulatory activities for lincRNA-Cox2. Cell Rep 25, 1511– 1524.e6 (2018). 30404006 PMC6291222
  94. [99]Gupta K International clinical practice guidelines for the treatment of acute uncomplicated cystitis and pyelonephritis in women: a 2010 update by the Infectious Diseases Society of America and the European Society for Microbiology and Infectious Diseases. Clin. Infect. Dis 52, e103– e120 (2011). 21292654
  95. [101]Langner JL, Chiang KF & Stafford RS Current prescribing practices and guideline concordance for the treatment of uncomplicated urinary tract infections in women. Am. J. Obstet. Gynecol 225, 272.e1– 272.e11 (2021). 33848538
  96. [102]Murray CJ Global burden of bacterial antimicrobial resistance in 2019: a systematic analysis. Lancet 399, 629– 655 (2022). 35065702 PMC8841637
  97. [103]Gibson EG, Bax B, Chan PF & Osheroff N Mechanistic and structural basis for the actions of the antibacterial gepotidacin against Staphylococcus aureus gyrase. ACS Infect. Dis 5, 570– 581 (2019). 30757898 PMC6461504
  98. [104]Bax BD Type IIA topoisomerase inhibition by a new class of antibacterial agents. Nature 466, 935– 940 (2010). 20686482
  99. [105]Wagenlehner F Oral gepotidacin versus nitrofurantoin in patients with uncomplicated urinary tract infection (EAGLE-2 and EAGLE-3): two randomised, controlled, double-blind, double-dummy, phase 3, non-inferiority trials. Lancet 403, 741– 755 (2024). 38342126
  100. [106]Eckburg PB Oral tebipenem pivoxil hydrobromide in complicated urinary tract infection. N. Engl. J. Med 386, 1327– 1338 (2022). 35388666
  101. [107]Szili P Rapid evolution of reduced susceptibility against a balanced dual-targeting antibiotic through stepping-stone mutations. Antimicrob. Agents Chemother 63, e00207– 19 (2019). 31235632 PMC6709476
  102. [108]Sun Z Evaluation of tebipenem hydrolysis by β-lactamases prevalent in complicated urinary tract infections. Antimicrob. Agents Chemother 66, e0239621 (2022). 35491852 PMC9112902
  103. [109]Williams G, Hahn D, Stephens JH, Craig JC & Hodson EM Cranberries for preventing urinary tract infections. Cochrane Database Syst. Rev 4, CD001321 (2023). 37068952 PMC10108827
  104. [110]Cooper TE d-Mannose for preventing and treating urinary tract infections. Cochrane Database Syst. Rev 8, CD013608 (2022). 36041061 PMC9427198
  105. [111]Hayward G d-Mannose for prevention of recurrent urinary tract infection among women: a randomized clinical trial. JAMA Intern. Med 184, 619– 628 (2024). 38587819 PMC11002776
  106. [112]Mydock-McGrane L Antivirulence C-mannosides as antibiotic-sparing, oral therapeutics for urinary tract infections. J. Med. Chem 59, 9390– 9408 (2016). 27689912 PMC5087331
  107. [113]US National Library of Medicine. ClinicalTrials.gov https://clinicaltrials.gov/study/NCT04488770 (2023). 28792816
  108. [114]Hasanzadeh S Silk fibroin nanoadjuvant as a promising vaccine carrier to deliver the fimH-IutA antigen for urinary tract infection. ACS Biomater. Sci. Eng 6, 4573– 4582 (2020). 33455198
  109. [115]Kelly SH A sublingual nanofiber vaccine to prevent urinary tract infections. Sci. Adv 8, eabq4120 (2022). PMC9683704 36417519
  110. [116]US National Library of Medicine. ClinicalTrials.gov https://clinicaltrials.gov/study/NCT04899336 (2024). 28792816
  111. [117]Huttner A Safety, immunogenicity, and preliminary clinical efficacy of a vaccine against extraintestinal pathogenic Escherichia coli in women with a history of recurrent urinary tract infection: a randomised, single-blind, placebo-controlled phase 1b trial. Lancet Infect. Dis 17, 528– 537 (2017). 28238601 This study shows that a top UPEC vaccine candidate that is currently in phase III clinical trials reduces UTI incidence in a cohort of women with recurrent UTI.
  112. [118]Frenck RW Safety and immunogenicity of a vaccine for extra-intestinal pathogenic Escherichia coli (ESTELLA): a phase 2 randomised controlled trial. Lancet Infect. Dis 19, 631– 640 (2019). 31079947
  113. [119]Nickel JC & Doiron RC An effective sublingual vaccine, MV140, safely reduces risk of recurrent urinary tract infection in women. Pathogens 12, 359 (2023). 36986281 PMC10052183
  114. [120]Eldridge GR Safety and immunogenicity of an adjuvanted Escherichia coli adhesin vaccine in healthy women with and without histories of recurrent urinary tract infections: results from a first-in-human phase 1 study. Hum. Vaccines Immunother 17, 1262– 1270 (2021). PMC8078672 33325785 This study provides human data available for a vaccine targeting the UPEC adhesin, FimH, which showed a promising trend towards a reduction in recurrent urinary tract infection in immunized patients.
  115. [121]Flores-Mireles AL Antibody-based therapy for enterococcal catheter-associated urinary tract infections. mBio 7, e01653– 16 (2016). 27795399 PMC5080383
  116. [122]Timm MR Vaccination with Acinetobacter baumannii adhesin Abp2D provides protection against catheter-associated urinary tract infection. Preprint at Research Square 10.21203/rs.3.rs-3213777/v1 (2023). PMC12335481 40783485 · DOI
  117. [123]Andersen MJ & Flores-Mireles AL Urinary catheter coating modifications: the race against catheter-associated infections. Coatings 10, 23 (2020).
  118. [124]Andersen MJ Inhibiting host-protein deposition on urinary catheters reduces associated urinary tract infections. eLife 11, e75798 (2022). 35348114 PMC8986317
  119. [125]Dubern J-F Discovery of a polymer resistant to bacterial biofilm, swarming, and encrustation. Sci. Adv 9, eadd7474 (2023). PMC9876547 36696507
  120. [126]Butler D Immunomodulation therapy offers new molecular strategies to treat UTI. Nat. Rev. Urol 19, 419– 437 (2022). 35732832 PMC9214477
  121. [127]Ong Lopez AMC, Tan CJL, Yabon AS & Masbang AN Symptomatic treatment (using NSAIDS) versus antibiotics in uncomplicated lower urinary tract infection: a meta-analysis and systematic review of randomized controlled trials. BMC Infect. Dis 21, 619 (2021). 34187385 PMC8243445
  122. [128]Ambite I Molecular basis of acute cystitis reveals susceptibility genes and immunotherapeutic targets. PLoS Pathog 12, e1005848 (2016). 27732661 PMC5061333
  123. [129]Ambite I Therapeutic effects of IL-1RA against acute bacterial infections, including antibiotic-resistant strains. Pathogens 13, 42 (2024). PMC10820880 38251349
  124. [130]Straub TJ Limited effects of long-term daily cranberry consumption on the gut microbiome in a placebo-controlled study of women with recurrent urinary tract infections. BMC Microbiol 21, 53 (2021). 33596852 PMC7890861
  125. [131]Tariq R, Tosh PK, Pardi DS & Khanna S Reduction in urinary tract infections in patients treated with fecal microbiota transplantation for recurrent Clostridioides difficile infection. Eur. J. Clin. Microbiol. Infect. Dis 42, 1037– 1041 (2023). 37351724
  126. [132]Wood N, Propst K, Yao M & Ferrando CA Fecal microbiota transfer for Clostridium difficile infection and its effects on recurrent urinary tract infection. Urogynecology 29, 814– 826 (2023). 36946907
  127. [133]Jeney SES, Lane F, Oliver A, Whiteson K & Dutta S Fecal microbiota transplantation for the treatment of refractory recurrent urinary tract infection. Obstet. Gynecol 136, 771– 773 (2020). 32925627 PMC8328471
  128. [134]Vendrik KEW Transmission of antibiotic-susceptible Escherichia coli causing urinary tract infections in a fecal microbiota transplantation recipient: consequences for donor screening? Open Forum Infect. Dis 9, ofac324 (2022). PMC9314704 35899275
  129. [135]Reid G Oral use of Lactobacillus rhamnosus GR-1 and L. fermentum RC-14 significantly alters vaginal flora: randomized, placebo-controlled trial in 64 healthy women. FEMS Immunol. Med. Microbiol 35, 131– 134 (2003). 12628548
  130. [136]Stapleton AE Randomized, placebo-controlled phase 2 trial of a Lactobacillus crispatus probiotic given intravaginally for prevention of recurrent urinary tract infection. Clin. Infect. Dis 52, 1212– 1217 (2011). 21498386 PMC3079401
  131. [137]Guiton PS Combinatorial small-molecule therapy prevents uropathogenic Escherichia coli catheter-associated urinary tract infections in mice. Antimicrob. Agents Chemother 56, 4738– 4745 (2012). 22733070 PMC3421856
  132. [138]Kalas V Structure-based discovery of glycomimetic FmlH ligands as inhibitors of bacterial adhesion during urinary tract infection. Proc. Natl Acad. Sci. USA 115, E2819– E2828 (2018). 29507247 PMC5866590
  133. [139]Fierro CA Safety, reactogenicity, immunogenicity, and dose selection of 10-valent extraintestinal pathogenic Escherichia coli bioconjugate vaccine (VAC52416) in adults aged 60–85 years in a randomized, multicenter, interventional, first-in-human, phase 1/2a study. Open Forum Infect. Dis 10, ofad417 (2023). PMC10442062 37608916
  134. [140]Nickel JC, Saz-Leal P & Doiron RC Could sublingual vaccination be a viable option for the prevention of recurrent urinary tract infection in Canada? A systematic review of the current literature and plans for the future. Can. Urol. Assoc. J 14, 281– 287 (2020). 33626320 PMC7402698
  135. [141]Lorenzo-Gómez M-F Sublingual MV140 for prevention of recurrent urinary tract infections. NEJM Evid 1, EVIDoa2100018 (2022). 38319200 This study demonstrates the efficacy of the vaccine candidate MV140, which is approved for compassionate use in Europe.
  136. [142]Mobley HLT & Alteri CJ Development of a vaccine against Escherichia coli urinary tract infections. Pathogens 5, 1 (2015). 26729174 PMC4810122
  137. [143]Forsyth VS Optimization of an experimental vaccine to prevent Escherichia coli urinary tract infection. mBio 11, e00555– 20 (2020). 32345645 PMC7188996
  138. [144]Mike LA, Smith SN, Sumner CA, Eaton KA & Mobley HLT Siderophore vaccine conjugates protect against uropathogenic Escherichia coli urinary tract infection. Proc. Natl Acad. Sci. USA 113, 13468– 13473 (2016). 27821778 PMC5127358
  139. [145]Hannan TJ Inhibition of cyclooxygenase-2 prevents chronic and recurrent cystitis. eBioMedicine 1, 46– 57 (2014). 26125048 PMC4457352
  140. [147]Bakhit M Use of methenamine hippurate to prevent urinary tract infections in community adult women: a systematic review and meta-analysis. Br. J. Gen. Pract 71, e528– e537 (2021). 34001538 PMC8136580
  141. [148]Botros C Methenamine hippurate compared with trimethoprim for the prevention of recurrent urinary tract infections: a randomized clinical trial. Int. Urogynecology J 33, 571– 580 (2022). 34115162
  142. [149]Harding C Alternative to prophylactic antibiotics for the treatment of recurrent urinary tract infections in women: multicentre, open label, randomised, non-inferiority trial. BMJ 376, e068229 (2022). 35264408 PMC8905684 This study is one of two recent clinical trials of the century-old therapy, methenamine hippurate, which shows non-inferiority compared to antibiotic prophylaxis for the prevention of recurrent urinary tract infection.
  143. [150]Sawhill JL The impact of methenamine hippurate treatment on urothelial integrity and bladder inflammation in aged female mice and women with urinary tract infections. Female Pelvic Med. Reconstr. Surg 28, e205– e210 (2022). 35536668 PMC9232912
  144. [151]Uyttebroek S Safety and efficacy of phage therapy in difficult-to-treat infections: a systematic review. Lancet Infect. Dis 22, e208– e220 (2022). 35248167
  145. [152]Silva A, Costa E, Freitas A & Almeida A Revisiting the frequency and antimicrobial resistance patterns of bacteria implicated in community urinary tract infections. Antibiotics 11, 768 (2022). 35740174 PMC9220357
  146. [153]Eure TR, Stone ND, Mungai EA, Bell JM & Thompson ND Antibiotic-resistant pathogens associated with urinary tract infections in nursing homes: summary of data reported to the national healthcare safety network long-term care facility component, 2013–2017. Infect. Control Hosp. Epidemiol 42, 31– 36 (2021). 32782037 PMC10627066
  147. [154]Huang L, Huang C, Yan Y, Sun L & Li H Urinary tract infection etiological profiles and antibiotic resistance patterns varied among different age categories: a retrospective study from a tertiary general hospital during a 12-year period. Front. Microbiol 12, 813145 (2022). 35154037 PMC8829000
  148. [155]Bailey AL & Burnham C-AD Reducing the time between inoculation and first-read of urine cultures using total lab automation significantly reduces turn-around-time of positive culture results with minimal loss of first-read sensitivity. Eur. J. Clin. Microbiol. Infect. Dis 38, 1135– 1141 (2019). 30806903
  149. [156]Gharavi MJ Comprehensive study of antimicrobial susceptibility pattern and extended spectrum beta-lactamase (ESBL) prevalence in bacteria isolated from urine samples. Sci. Rep 11, 578 (2021). 33436687 PMC7804094
  150. [157]Zilberberg MD, Nathanson BH, Sulham K & Shorr AF Antimicrobial susceptibility and cross-resistance patterns among common complicated urinary tract infections in U.S. hospitals, 2013 to 2018. Antimicrob. Agents Chemother 64, e00346– 20 (2020). 32423953 PMC7526848
  151. [158]Rossignol L Incidence of urinary tract infections and antibiotic resistance in the outpatient setting: a cross-sectional study. Infection 45, 33– 40 (2017). 27234045
  152. [159]van Driel AA Antibiotic resistance of Escherichia coli isolated from uncomplicated UTI in general practice patients over a 10-year period. Eur. J. Clin. Microbiol. Infect. Dis 38, 2151– 2158 (2019). 31440915 PMC6800841
  153. [160]Heytens S, Boelens J, Claeys G, DeSutter A & Christiaens T Uropathogen distribution and antimicrobial susceptibility in uncomplicated cystitis in Belgium, a high antibiotics prescribing country: 20-year surveillance. Eur. J. Clin. Microbiol. Infect. Dis 36, 105– 113 (2017). 27639858
  154. [161]Koh SWC Antibiotic treatment failure of uncomplicated urinary tract infections in primary care. Antimicrob. Resist. Infect. Control 12, 73 (2023). 37528415 PMC10394943
  155. [162]Sanchez GV Antibiotic resistance among urinary isolates from female outpatients in the United States in 2003 and 2012. Antimicrob. Agents Chemother 60, 2680– 2683 (2016). 26883714 PMC4862481
  156. [163]NkontCho F Antimicrobial susceptibility of community-acquired urine bacterial isolates in French Amazonia. Am. J. Trop. Med. Hyg 108, 927– 935 (2023). 37011893 PMC10160890
  157. [166]Maldonado-Barragán A Predominance of multidrug-resistant bacteria causing urinary tract infections among symptomatic patients in East Africa: a call for action. JAC Antimicrob. Resist 6, dlae019 (2024). PMC10873138 38372000
  158. [167]Roth RS, Liden M & Huttner A The urobiome in men and women: a clinical review. Clin. Microbiol. Infect 29, 1242– 1248 (2023). 36028087 This review provides an overview of the currently available literature on the structure and clinical implications of the urobiome in different groups of patients, including men and patients with urological diseases.
  159. [168]Dou W Defective expression of Tamm-Horsfall protein/uromodulin in COX-2-deficient mice increases their susceptibility to urinary tract infections. Am. J. Physiol. Ren. Physiol 289, F49– F60 (2005). 15741608
  160. [169]Mohanty S Inhibition of COX-2 signaling favors E. coli during urinary tract infection. J. Inflamm 20, 30 (2023). PMC10496388 37697284
  161. [170]Ebrahimzadeh T Urinary prostaglandin E2 as a biomarker for recurrent UTI in postmenopausal women. Life Sci. Alliance 4, e202000948 (2021). 33958485 PMC8200289
  162. [171]Siddiqui H, Nederbragt AJ, Lagesen K, Jeansson SL & Jakobsen KS Assessing diversity of the female urine microbiota by high throughput sequencing of 16S rDNA amplicons. BMC Microbiol 11, 244 (2011). 22047020 PMC3228714
  163. [172]Lewis DA The human urinary microbiome; bacterial DNA in voided urine of asymptomatic adults. Front. Cell. Infect. Microbiol 3, 41 (2013). 23967406 PMC3744036
  164. [173]Wolfe AJ Evidence of uncultivated bacteria in the adult female bladder. J. Clin. Microbiol 50, 1376– 1383 (2012). 22278835 PMC3318548
  165. [174]Hrbacek J, Morais D, Cermak P, Hanacek V & Zachoval R Alpha-diversity and microbial community structure of the male urinary microbiota depend on urine sampling method. Sci. Rep 11, 23758 (2021). 34887510 PMC8660768
  166. [175]Price TK The urobiome of continent adult women: a cross-sectional study. BJOG 127, 193– 201 (2020). 31469215 PMC7197444
  167. [176]Thomas-White KJ Urinary microbes and postoperative urinary tract infection risk in urogynecologic surgical patients. Int. Urogynecol. J 29, 1797– 1805 (2018). 30267143 PMC6527134
  168. [177]Ammitzbøll N Pre- and postmenopausal women have different core urinary microbiota. Sci. Rep 11, 2212 (2021). 33500504 PMC7838182

Authors
Timm, M. R., Russell, S. K., & Hultgren, S. J.
Affiliations
Washington University in St. Louis (US)
Corresponding author
Hultgren, Scott J.
Venue
Nature Reviews Microbiology
Published
2024-09-09
Volume
23
Issue
2
Pages
72-86
ISSN
  • 1740-1526 (ISSN-L)
  • 1740-1534
OpenAlex
W4402366396
Cited by
190
References
2
Citations by year
2026: 112 · 2025: 75 · 2024: 3
FWCI
11.52
Type
journal article
Language
en
Open access
Locations
  • Nature Reviews Microbiology (publishedVersion)
  • PubMed (publishedVersion)
  • PubMed Central (publishedVersion)
Funders
  • National Institute of Allergy and Infectious Diseases (R01AI048689, R01AI029549, U19AI157797)
  • National Institute of Diabetes and Digestive and Kidney Diseases (R01DK132327, T32DK077653, R01DK121822, F30DK135390)
Topics
  • Health Sciences › Medicine › Epidemiology › Urinary Tract Infections Management
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Endocrinology › Escherichia coli research studies
  • Health Sciences › Medicine › Surgery › Bladder and Urothelial Cancer Treatments
Keywords
urinary tract infection, uropathogenic Escherichia coli, Klebsiella, Enterococcus, Pseudomonas, Staphylococcus, Candida, host susceptibility, host-pathogen interaction, antimicrobial resistance, antibiotic resistance, recurrent urinary tract infection, bacterial persistence, catheter-associated urinary tract infection, risk factors
MeSH terms
Anti-Bacterial Agents, Bacteria, Disease Susceptibility, Female, Humans, Male, Urinary Tract Infections, Host-Pathogen Interactions

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review