Cited by 61Bacterial Genetics and BiotechnologyTuberculosis Research and EpidemiologyBiochemical and Structural Characterization

Sequential assembly of the septal cell envelope prior to V snapping in Corynebacterium glutamicum

Open access
Zhou, Xiaoxue, Rodriguez-Rivera, Frances P., Lim, Hoong Chuin, Bell, Jason C., Bernhardt, Thomas G., Bertozzi, Carolyn R., Theriot, Julie A.·2019·Nature Chemical Biology

Abstract

Members of the Corynebacterineae, including Corynebacterium and Mycobacterium, have an atypical cell envelope characterized by an additional mycomembrane outside of the peptidoglycan layer. How this multilayered cell envelope is assembled remains unclear. Here, we tracked the assembly dynamics of different envelope layers in Corynebacterium glutamicum and Mycobacterium smegmatis by using metabolic labeling and found that the septal cell envelope is assembled sequentially in both species. Additionally, we demonstrate that in C. glutamicum, the peripheral peptidoglycan layer at the septal junction remains contiguous throughout septation, forming a diffusion barrier for the fluid mycomembrane. This diffusion barrier is resolved through perforations in the peripheral peptidoglycan, thus leading to the confluency of the mycomembrane before daughter cell separation (V snapping). Furthermore, the same junctional peptidoglycan also serves as a mechanical link holding the daughter cells together and undergoes mechanical fracture during V snapping. Finally, we show that normal V snapping in C. glutamicum depends on complete assembly of the septal cell envelope.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1038/s41589-018-0206-1

Cites

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • The peptidoglycan layer is constructed before the mycolic acid layer.

    “This thorough article shows that the cell wall core is assembled in an ordered fashion: the peptidoglycan layer is constructed before the mycolic acid layer (see Supplementary information for the mycobacterial data).”

    From The mycobacterial cell envelope — a moving target (2020) · cites this paper as [39]

    The Discussion states that the septal envelope in C. glutamicum and M. smegmatis is assembled sequentially from peptidoglycan (PG) to mycomembrane (MM). The claim omits the septal qualification: the same passage describes polar-growth assembly as apparently synchronous, so the ordering does not apply to cell-wall assembly generally. Page numbers are not available in the supplied copy. (LLM, conf=0.88)

    Experimental — accuracy not yet measured
  • The cell wall core is assembled in an ordered fashion.

    “This thorough article shows that the cell wall core is assembled in an ordered fashion: the peptidoglycan layer is constructed before the mycolic acid layer (see Supplementary information for the mycobacterial data).”

    From The mycobacterial cell envelope — a moving target (2020) · cites this paper as [39]

    The Discussion states that in C. glutamicum and M. smegmatis, the septal cell envelope is assembled sequentially from peptidoglycan to the mycolic membrane during cytokinesis. The citing sentence omits that condition: the same passage says assembly during polar growth appears synchronous, so it does not support ordered assembly as a general rule. (LLM, conf=0.86)

    Experimental — accuracy not yet measured

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

The citation lists haven’t been fetched yet

References 51 · Cited by 61

Research works printed but not linked: 49

  1. [1]Silhavy TJ, Kahne D & Walker S The bacterial cell envelope. Cold Spring Harb. Perspect. Biol 2, a000414 (2010). 20452953 PMC2857177
  2. [3]Zuber B Direct visualization of the outer membrane of mycobacteria and corynebacteria in their native state. J. Bacteriol 190, 5672– 5680 (2008). 18567661 PMC2519390
  3. [4]Marrakchi H, Lanéelle MA & Daffé M Mycolic acids: structures, biosynthesis, and beyond. Chem. Biol 21, 67– 85 (2014). 24374164
  4. [5]Rodriguez-Rivera FP, Zhou X, Theriot JA & Bertozzi CR Visualization of mycobacterial membrane dynamics in live cells. J. Am. Chem. Soc 139, 3488– 3495 (2017). 28075574 PMC5345120
  5. [6]Draper P The outer parts of the mycobacterial envelope as permeability barriers. Front. Biosci 3, D1253– D1261 (1998). 9851911
  6. [7]Jackson M Inactivation of the antigen 85C gene profoundly affects the mycolate content and alters the permeability of the Mycobacterium tuberculosis cell envelope. Mol. Microbiol 31, 1573– 1587 (1999). 10200974
  7. [8]Zhang Y The magic bullets and tuberculosis drug targets. Annu. Rev. Pharmacol. Toxicol 45, 529– 564 (2005). 15822188
  8. [9]Janin YL Antituberculosis drugs: ten years of research. Bioorg. Med. Chem 15, 2479– 2513 (2007). 17291770
  9. [10]Jankute M, Cox JA, Harrison J & Besra GS Assembly of the mycobacterial cell wall. Annu. Rev. Microbiol 69, 405– 423 (2015). 26488279
  10. [11]Daniel RA & Errington J Control of cell morphogenesis in bacteria: two distinct ways to make a rod-shaped cell. Cell 113, 767– 776 (2003). 12809607
  11. [12]Kuru E In situ probing of newly synthesized peptidoglycan in live bacteria with fluorescent d-amino acids. Angew. Chem. Int. Edn. Engl 51, 12519– 12523 (2012). PMC3589519 23055266
  12. [13]Letek M DivIVA is required for polar growth in the MreB-lacking rod-shaped actinomycete Corynebacterium glutamicum. J. Bacteriol 190, 3283– 3292 (2008). 18296522 PMC2347398
  13. [14]Meniche X Subpolar addition of new cell wall is directed by DivIVA in mycobacteria. Proc. Natl Acad. Sci. USA 111, E3243– E3251 (2014). 25049412 PMC4128124
  14. [15]Carel C Mycobacterium tuberculosis proteins involved in mycolic acid synthesis and transport localize dynamically to the old growing pole and septum. PLoS One 9, e97148 (2014). 24817274 PMC4016276
  15. [16]Hill HW Branching in bacteria with special reference to B. diphtheriae. J. Med. Res 7, 115– 127 (1902). 19971447 PMC2105823
  16. [17]Dahl JL Electron microscopy analysis of Mycobacterium tuberculosis cell division. FEMS Microbiol. Lett 240, 15– 20 (2004). 15500974
  17. [18]Letek M Cell growth and cell division in the rod-shaped actinomycete Corynebacterium glutamicum. Antonie van Leeuwenhoek 94, 99– 109 (2008). 18283557
  18. [19]Zhou X, Halladin DK & Theriot JA Fast mechanically driven daughter cell separation is widespread in actinobacteria. MBio 7, e00952– 16 (2016). 27578753 PMC4999543
  19. [20]Siegrist MS, Swarts BM, Fox DM, Lim SA & Bertozzi CR Illumination of growth, division and secretion by metabolic labeling of the bacterial cell surface. FEMS Microbiol. Rev 39, 184– 202 (2015). 25725012 PMC4462956
  20. [22]Foley HN, Stewart JA, Kavunja HW, Rundell SR & Swarts BM Bioorthogonal chemical reporters for selective in situ probing of mycomembrane components in mycobacteria. Angew. Chem. Int. Edn. Engl 55, 2053– 2057 (2016). 26757001
  21. [23]Kumagai Y, Hirasawa T, Hayakawa K, Nagai K & Wachi M Fluorescent phospholipid analogs as microscopic probes for detection of the mycolic acid-containing layer in Corynebacterium glutamicum: detecting alterations in the mycolic acid-containing layer following ethambutol treatment. Biosci. Biotechnol. Biochem 69, 2051– 2056 (2005). 16306684
  22. [24]Puech V Structure of the cell envelope of corynebacteria: importance of the non-covalently bound lipids in the formation of the cell wall permeability barrier and fracture plane. Microbiology 147, 1365– 1382 (2001). 11320139
  23. [25]Ngo JT Click-EM for imaging metabolically tagged nonprotein biomolecules. Nat. Chem. Biol 12, 459– 465 (2016). 27110681 PMC4871776
  24. [26]Vijay S, Anand D & Ajitkumar P Unveiling unusual features of formation of septal partition and constriction in mycobacteria: an ultrastructural study. J. Bacteriol 194, 702– 707 (2012). 22101845 PMC3264065
  25. [27]Zhou X Mechanical crack propagation drives millisecond daughter cell separation in Staphylococcus aureus. Science 348, 574– 578 (2015). 25931560 PMC4864021
  26. [28]Peyret JL Characterization of the cspB gene encoding PS2, an ordered surface-layer protein in Corynebacterium glutamicum. Mol. Microbiol 9, 97– 109 (1993). 8412676
  27. [29]Hansmeier N Classification of hyper-variable Corynebacterium glutamicum surface-layer proteins by sequence analyses and atomic force microscopy. J. Biotechnol 112, 177– 193 (2004). 15288952
  28. [30]Hansmeier N The surface (S)-layer gene cspB of Corynebacterium glutamicum is transcriptionally activated by a LuxR-type regulator and located on a 6kb genomic island absent from the type strain ATCC 13032. Microbiology 152, 923– 935 (2006). 16549657
  29. [31]Barreau C, Bimet F, Kiredjian M, Rouillon N & Bizet C Comparative chemotaxonomic studies of mycolic acid-free coryneform bacteria of human origin. J. Clin. Microbiol 31, 2085– 2090 (1993). 8370733 PMC265701
  30. [32]Umeda A & Amako K Growth of the surface of Corynebacterium diphtheriae. Microbiol. Immunol 27, 663– 671 (1983). 6417458
  31. [33]Tsuge Y, Ogino H, Teramoto H, Inui M & Yukawa H Deletion of cgR_1596 and cgR_2070, encoding NlpC/P60 proteins, causes a defect in cell separation in Corynebacterium glutamicum R. J. Bacteriol 190, 8204– 8214 (2008). 18931118 PMC2593200
  32. [34]Atilgan E, Magidson V, Khodjakov A & Chang F Morphogenesis of the fission yeast cell through cell wall expansion. Curr. Biol 25, 2150– 2157 (2015). 26212881 PMC4627367
  33. [35]Telenti A The emb operon, a gene cluster of Mycobacterium tuberculosis involved in resistance to ethambutol. Nat. Med 3, 567– 570 (1997). 9142129
  34. [36]Escuyer VE The role of the embA and embB gene products in the biosynthesis of the terminal hexaarabinofuranosyl motif of Mycobacterium smegmatis arabinogalactan. J. Biol. Chem 276, 48854– 48862 (2001). 11677227
  35. [37]Mikusová K, Slayden RA, Besra GS & Brennan PJ Biogenesis of the mycobacterial cell wall and the site of action of ethambutol. Antimicrob. Agents Chemother 39, 2484– 2489 (1995). 8585730 PMC162969
  36. [38]Radmacher E Ethambutol, a cell wall inhibitor of Mycobacterium tuberculosis, elicits l-glutamate efflux of Corynebacterium glutamicum. Microbiology 151, 1359– 1368 (2005). 15870446
  37. [39]Schubert K The antituberculosis drug ethambutol selectively blocks apical growth in CMN group bacteria. MBio 8, e02213– 16 (2017). 28174310 PMC5296602
  38. [40]Kawai Y A widespread family of bacterial cell wall assembly proteins. EMBO J. 30, 4931– 4941 (2011). 21964069 PMC3243631
  39. [41]Chan YG, Frankel MB, Dengler V, Schneewind O & Missiakas D Staphylococcus aureus mutants lacking the LytR-CpsA-Psr family of enzymes release cell wall teichoic acids into the extracellular medium. J. Bacteriol 195, 4650– 4659 (2013). 23935043 PMC3807444
  40. [42]Baumgart M, Schubert K, Bramkamp M & Frunzke J Impact of LytR-CpsA-Psr proteins on cell wall biosynthesis in Corynebacterium glutamicum. J. Bacteriol 198, 3045– 3059 (2016). 27551018 PMC5075034
  41. [43]Grzegorzewicz AE Assembling of the Mycobacterium tuberculosis cell wall core. J. Biol. Chem 291, 18867– 18879 (2016). 27417139 PMC5009262
  42. [44]Harrison J Lcp1 is a phosphotransferase responsible for ligating arabinogalactan to peptidoglycan in Mycobacterium tuberculosis. MBio 7, e00972– 16 (2016). 27486192 PMC4981717
  43. [45]Dautin N Mycoloyltransferases: a large and major family of enzymes shaping the cell envelope of Corynebacteriales. Biochim. Biophys. Acta Gen. Subj 1861, 3581– 3592 (2017). 27345499
  44. [46]Touchette MH & Seeliger JC Transport of outer membrane lipids in mycobacteria. Biochim. Biophys. Acta Mol. Cell. Biol. Lipids 1862, 1340– 1354 (2017). 28110100
  45. [47]Baumgart M Construction of a prophage-free variant of Corynebacterium glutamicum ATCC 13032 for use as a platform strain for basic research and industrial biotechnology. Appl. Environ. Microbiol 79, 6006– 6015 (2013). 23892752 PMC3811366
  46. [48]Okibe N, Suzuki N, Inui M & Yukawa H Efficient markerless gene replacement in Corynebacterium glutamicum using a new temperaturesensitive plasmid. J. Microbiol. Methods 85, 155– 163 (2011). 21362445
  47. [49]Rodriguez-Rivera FP, Zhou X, Theriot JA & Bertozzi CR Acute modulation of mycobacterial cell envelope biogenesis by front-line tuberculosis drugs. Angew. Chem. Int. Edn. Engl 57, 5267– 5272 (2018). PMC5924460 29392891
  48. [50]Besanceney-Webler C Increasing the efficacy of bioorthogonal click reactions for bioconjugation: a comparative study. Angew. Chem. Int. Edn. Engl 50, 8051– 8056 (2011). PMC3465470 21761519
  49. [51]Paintdakhi A Oufti: an integrated software package for high-accuracy, high-throughput quantitative microscopy analysis. Mol. Microbiol 99, 767– 777 (2016). 26538279 PMC4752901

Authors
Zhou, X., Rodriguez-Rivera, F. P., Lim, H. C., Bell, J. C., Bernhardt, T. G., Bertozzi, C. R., & Theriot, J. A.
Affiliations
  • Stanford Medicine (US)
  • Harvard University (US)
  • Howard Hughes Medical Institute (US)
Corresponding author
Theriot, Julie A.
Venue
Nature Chemical Biology
Published
2019-01-21
Volume
15
Issue
3
Pages
221-231
ISSN
  • 1552-4450 (ISSN-L)
  • 1552-4469
OpenAlex
W2909242222
Cited by
61
References
51
Citations by year
2026: 7 · 2025: 9 · 2024: 5 · 2023: 7 · 2022: 10 · 2021: 10 · 2020: 5 · 2019: 7 · 2018: 1
FWCI
4.76
Type
journal article
Language
en
Open access
Locations
  • Nature Chemical Biology (publishedVersion)
  • PubMed (publishedVersion)
  • Europe PMC (PubMed Central) (acceptedVersion)
  • PubMed Central (acceptedVersion)
Funders
  • Howard Hughes Medical Institute
  • National Institutes of Health (1s10rr026780-01, GM058867, AI051622)
  • National Institute of General Medical Sciences (R37GM058867, P50GM107615, F32GM116338, R01GM058867)
  • National Institute of Allergy and Infectious Diseases (R01AI051622, R01AI036929, R37AI036929, R37AI051622)
  • National Center for Research Resources (S10 RR026780)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
  • Health Sciences › Medicine › Infectious Diseases › Tuberculosis Research and Epidemiology
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Biochemical and Structural Characterization
Keywords
mycomembrane, peptidoglycan, cell division, Corynebacterium glutamicum, Mycobacterium smegmatis, Corynebacterineae, metabolic labeling, diffusion barrier, cell isolation, cell wall mechanics
MeSH terms
Bacteria, Bacterial Outer Membrane Proteins, Bacterial Proteins, Cell Division, Cell Membrane, Cell Wall, Corynebacterium, Mycolic Acids, Peptidoglycan, Mycobacterium smegmatis, Corynebacterium glutamicum

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review