The DOI matches its Crossref record; 31 of the 31 references it cites were found in a registry or an index.
Discovery of solabiose phosphorylase and its application for enzymatic synthesis of solabiose from sucrose and lactose
Open accessPublished version of a preprint
Abstract
Glycoside phosphorylases (GPs), which catalyze the reversible phosphorolysis of glycosides, are promising enzymes for the efficient production of glycosides. Various GPs with new catalytic activities are discovered from uncharacterized proteins phylogenetically distant from known enzymes in the past decade. In this study, we characterized Paenibacillus borealis PBOR_28850 protein, belonging to glycoside hydrolase family 94. Screening of acceptor substrates for reverse phosphorolysis, in which α- d -glucose 1-phosphate was used as the donor substrate, revealed that the recombinant PBOR_28850 produced in Escherichia coli specifically utilized d -galactose as an acceptor and produced solabiose (β- d -Glc p -(1 → 3)- d -Gal). This indicates that PBOR_28850 is a new GP, solabiose phosphorylase. PBOR_28850 catalyzed the phosphorolysis and synthesis of solabiose through a sequential bi-bi mechanism involving the formation of a ternary complex. The production of solabiose from lactose and sucrose has been established. Lactose was hydrolyzed to d -galactose and d -glucose by β-galactosidase. Phosphorolysis of sucrose and synthesis of solabiose were then coupled by adding sucrose, sucrose phosphorylase, and PBOR_28850 to the reaction mixture. Using 210 mmol lactose and 280 mmol sucrose, 207 mmol of solabiose was produced. Yeast treatment degraded the remaining monosaccharides and sucrose without reducing solabiose. Solabiose with a purity of 93.7% was obtained without any chromatographic procedures.
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Highly accurate protein structure prediction with AlphaFold
Jumper, J., Evans, R., Pritzel, A., Green, T., Figurnov, M., Ronneberger, O., Tunyasuvunakool, K., Bates, R., Žídek, A., Potapenko, A., et al. (2021) · Nature · doi:10.1038/s41586-021-03819-2 · Cited by 43,764
The carbohydrate-active enzymes database (CAZy) in 2013
Lombard, V., Ramulu, H. G., Drula, É., Coutinho, P. M., & Henrissat, B. (2013) · Nucleic Acids Research · doi:10.1093/nar/gkt1178 · Cited by 6,452
Gas-Liquid Chromatography of Trimethylsilyl Derivatives of Sugars and Related Substances
Sweeley, C. C., Bentley, R., Makita, M., & Wells, W. W. (1963) · Journal of the American Chemical Society · doi:10.1021/ja00899a032 · Cited by 2,183
THE DETERMINATION OF INORGANIC PHOSPHATE IN THE PRESENCE OF LABILE PHOSPHATE ESTERS
Lowry, O. H., & Lopez, J. A. (1946) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)41386-x · Cited by 1,590
An Evolving Hierarchical Family Classification for Glycosyltransferases
Coutinho, P. M., Deleury, E., Davies, G. J., & Henrissat, B. (2003) · Journal of Molecular Biology · doi:10.1016/s0022-2836(03)00307-3 · Cited by 1,250
MAFFT-DASH: integrated protein sequence and structural alignment
Rozewicki, J., Li, S., Amada, K. M., Standley, D. M., & Katoh, K. (2019) · Nucleic Acids Research · doi:10.1093/nar/gkz342 · Cited by 814
Ribose-Map: a bioinformatics toolkit to map ribonucleotides embedded in genomic DNA
Gombolay, A. L., Vannberg, F. O., & Storici, F. (2019) · Nucleic Acids Research · doi:10.1093/nar/gky874 · Cited by 204
Practical Preparation of Lacto-N-biose I, a Candidate for the Bifidus Factor in Human Milk
Nishimoto, M., & Kitaoka, M. (2007) · Bioscience Biotechnology and Biochemistry · doi:10.1271/bbb.70320 · Cited by 170
Self-citationRecent development of phosphorylases possessing large potential for oligosaccharide synthesis
Nakai, H., Kitaoka, M., Svensson, B., & Ohtsubo, K. (2013) · Current Opinion in Chemical Biology · doi:10.1016/j.cbpa.2013.01.006 · Cited by 145
Self-citationHidaka, M., Honda, Y., Kitaoka, M., Nirasawa, S., Hayashi, K., Wakagi, T., Shoun, H., & Fushinobu, S. (2004) · Structure · doi:10.1016/j.str.2004.03.027 · Cited by 109
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Research works printed but not linked: 1
- Murao, S., Nagano, H., Ogura, S. & Nishino, T. Enzymatic synthesis of trehalose from maltose. Agric. Biol. Chem. 49, 2113–2118 (1985).
Metadata
- Authors
- Saburi, W., Nihira, T., Nakai, H., Kitaoka, M., & Mori, H.
- Affiliations
- Hokkaido University (JP)
- Niigata University (JP)
- Corresponding author
- Saburi, Wataru
- Venue
- Scientific Reports
- Published
- 2022-01-07
- Volume
- 12
- Issue
- 1
- Pages
- 259-259
- ISSN
- 2045-2322 (ISSN-L)
- PMC
- PMC8741936
- OpenAlex
- W4226055960
- Cited by
- 7
- References
- 31
- Citations by year
- 2025: 2 · 2024: 3 · 2022: 2
- FWCI
- 0.67
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- cc-by
- creativecommons.org/licenses/by/4.0 (tdm)
- creativecommons.org/licenses/by/4.0 (vor)
- Locations
- Scientific Reports (publishedVersion, cc-by)
- Research Square (acceptedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Hokkaido University Collection of Scholarly and Academic Papers (Hokkaido University) (submittedVersion)
- Institutional Repositories DataBase (IRDB) (submittedVersion)
- Funders
- Hokkaido University
- Japan Society for the Promotion of Science (19K22263)
- Topics
- Physical Sciences › Chemistry › Organic Chemistry › Carbohydrate Chemistry and Synthesis
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Enzyme Catalysis and Immobilization
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Biotechnology › Enzyme Production and Characterization
- Keywords
- sucrose, lactose, sucrose phosphorylase, ternary complex, beta-galactosidase
- MeSH terms
- Bacterial Proteins, Binding Sites, Catalysis, Disaccharides, Phosphorylases, Hydrolysis, Kinetics, Lactose, Substrate Specificity, Sucrose, Catalytic Domain, Paenibacillus
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- Saburi, W., Nihira, T., Nakai, H., Kitaoka, M., & Mori, H. (2022). Discovery of solabiose phosphorylase and its application for enzymatic synthesis of solabiose from sucrose and lactose. Scientific Reports. https://doi.org/10.1038/s41598-021-04421-2
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