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Cited by 159

The DOI matches its Crossref record; 9 of the 9 references it cites were found in a registry or an index.

Uncertainty-driven dynamics for active learning of interatomic potentials

Open access
Kulichenko, Maksim, Barros, Kipton, Lubbers, Nicholas, Li, Ying Wai, Messerly, Richard, Tretiak, Sergei, Smith, Justin S., Nebgen, Benjamin·2023·Nature Computational Science

Abstract

Machine learning (ML) models, if trained to data sets of high-fidelity quantum simulations, produce accurate and efficient interatomic potentials. Active learning (AL) is a powerful tool to iteratively generate diverse data sets. In this approach, the ML model provides an uncertainty estimate along with its prediction for each new atomic configuration. If the uncertainty estimate passes a certain threshold, then the configuration is included in the data set. Here we develop a strategy to more rapidly discover configurations that meaningfully augment the training data set. The approach, uncertainty-driven dynamics for active learning (UDD-AL), modifies the potential energy surface used in molecular dynamics simulations to favor regions of configuration space for which there is large model uncertainty. The performance of UDD-AL is demonstrated for two AL tasks: sampling the conformational space of glycine and sampling the promotion of proton transfer in acetylacetone. The method is shown to efficiently explore the chemically relevant configuration space, which may be inaccessible using regular dynamical sampling at target temperature conditions.

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Metadata

Authors
Kulichenko, M., Barros, K., Lubbers, N., Li, Y. W., Messerly, R., Tretiak, S., Smith, J. S., & Nebgen, B.
Venue
Nature Computational Science
Published
2023-03-06
Volume
3
Issue
3
Pages
230-239
ISSN
2662-8457 (ISSN-L)
OpenAlex
W4323320070
Cited by
159
References
9
FWCI
11.19
Type
journal article
Language
en
Open access
hybrid

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CoChat. (2026). Citation check: Uncertainty-driven dynamics for active learning of interatomic potentials. https://app.cochat.ai/papers/10.1038/s43588-023-00406-5
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Kulichenko, M., Barros, K., Lubbers, N., Li, Y. W., Messerly, R., Tretiak, S., Smith, J. S., & Nebgen, B. (2023). Uncertainty-driven dynamics for active learning of interatomic potentials. Nature Computational Science. https://doi.org/10.1038/s43588-023-00406-5

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