The DOI matches its Crossref record.
Mapping residues of SUMO precursors essential in differential maturation by SUMO-specific protease, SENP1
Abstract
SUMO (small ubiquitin-related modifier) is a member of the ubiquitin-like protein family that regulates cellular function of a variety of target proteins. SUMO proteins are expressed as their precursor forms. Cleavage of the residues after the ‘GG’ region of these precursors by SUMO-specific proteases in maturation is a prerequisite for subsequent sumoylation. To understand further this proteolytic processing, we expressed and purified SENP1 (sentrin-specific protease 1), one of the SUMO-specific proteases, using an Escherichia coli expression system. We show that SENP1 is capable of processing all SUMO-1, -2 and -3 in vitro; however, the proteolytic efficiency of SUMO-1 is the highest followed by SUMO-2 and -3. We demonstrate further that the catalytic domain of SENP1 (SENP1C) alone can determine the substrate specificity towards SUMO-1, -2 and -3. Replacement of the C-terminal fragments after the ‘GG’ region of SUMO-1 and -2 precursors with that of the SUMO-3, indicates that the C-terminal fragment is essential for efficient maturation. In mutagenesis analysis, we further map two residues immediately after the ‘GG’ region, which determine the differential maturation. Distinct patterns of tissue distribution of SENP1, SUMO-1, -2 and -3 are characterized. Taken together, we suggest that the observed differential maturation process has its physiological significance in the regulation of the sumoylation pathway.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
SENP1 mRNA and protein are present in many human tissues including the liver, and are highly enriched in the testis.
“Further, SENP1 mRNA and protein, despite present in many human tissues including the liver, are highly enriched in the testis (43) (www.proteinatlas.org).”
From SUMOylation of the ubiquitin ligase IDOL decreases LDL receptor levels and is reversed by SENP1 (2021) · cites this paper as [43]
The ‘Distinct expression patterns’ section reports that SENP1 is highly expressed in testis and detectable in several other human tissues, including liver. However, the tissue-distribution experiment measured transcription by PCR, not SENP1 protein levels, so this source does not establish the claim about protein distribution. (LLM, conf=0.88)
Experimental — accuracy not yet measured
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
No references could be resolved yet.
Research works printed but not linked: 37
- Verger, 2003, Modification with SUMO, EMBO Rep., 4, 137, 10.1038/sj.embor.embor738 · DOI
- Kim, 2002, Versatile protein tag, SUMO: its enzymology and biological function, J. Cell. Physiol., 191, 257, 10.1002/jcp.10100 · DOI
- Muller, 2001, SUMO, ubiquitin's mysterious cousin, Nat. Rev. Mol. Cell. Biol., 2, 202, 10.1038/35056591 · DOI
- Muller, 2004, SUMO: a regulator of gene expression and genome integrity, Oncogene, 23, 1998, 10.1038/sj.onc.1207415 · DOI
- Long, 2000, Identification and characterization of a SUMO-1 conjugation system that modifies neuronal calcium/calmodulin-dependent protein kinase II in Drosophila melanogaster, J. Biol. Chem., 275, 40765, 10.1074/jbc.M003949200 · DOI
- Buschmann, 2000, SUMO-1 modification of Mdm2 prevents its self-ubiquitination and increases Mdm2 ability to ubiquitinate p53, Cell (Cambridge, Mass.), 101, 753, 10.1016/S0092-8674(00)80887-9 · DOI
- Kadare, 2003, PIAS1-mediated sumoylation of focal adhesion kinase activates its autophosphorylation, J. Biol. Chem., 278, 47434, 10.1074/jbc.M308562200 · DOI
- Hietakangas, 2003, Phosphorylation of serine 303 is a prerequisite for the stress-inducible SUMO modification of heat shock factor 1, Mol. Cell. Biol., 23, 2953, 10.1128/MCB.23.8.2953-2968.2003 · DOI
- Swaminathan, 2004, RanGAP1*SUMO1 is phosphorylated at the onset of mitosis and remains associated with RanBP2 upon NPC disassembly, J. Cell Biol., 164, 965, 10.1083/jcb.200309126 · DOI
- Hilgarth, 2003, Insights into the regulation of heat shock transcription factor 1 SUMO-1 modification, Biochem. Biophys. Res. Commun., 303, 196, 10.1016/S0006-291X(03)00312-7 · DOI
- Wilson, 2001, Viral interaction with the host cell sumoylation system, Virus Res., 81, 17, 10.1016/S0168-1702(01)00365-3 · DOI
- Hofmann, 2000, Covalent modification of the transactivator protein IE2-p86 of human cytomegalovirus by conjugation to the ubiquitin-homologous proteins SUMO-1 and hSMT3b, J. Virol., 74, 2510, 10.1128/JVI.74.6.2510-2524.2000 · DOI
- Rangasamy, 2000, Bovine papillomavirus E1 protein is sumoylated by the host cell Ubc9 protein, J. Biol. Chem., 275, 30487, 10.1074/jbc.M003898200 · DOI
- Adamson, 2001, Epstein-Barr virus immediate-early protein BZLF1 is SUMO-1 modified and disrupts promyelocytic leukemia bodies, J. Virol., 75, 2388, 10.1128/JVI.75.5.2388-2399.2001 · DOI
- Ahn, 2001, Evaluation of interactions of human cytomegalovirus immediate-early IE2 regulatory protein with small ubiquitin-like modifiers and their conjugation enzyme Ubc9, J. Virol., 75, 3859, 10.1128/JVI.75.8.3859-3872.2001 · DOI
- Cornelis, 2001, Yersinia lead SUMO attack, Nat. Med. (N.Y.), 7, 21, 10.1038/83298 · DOI
- Bailey, 2002, Herpes simplex virus 1 ICP0 co-localizes with a SUMO-specific protease, J. Gen. Virol., 83, 2951, 10.1099/0022-1317-83-12-2951 · DOI
- Parkinson, 2000, Alphaherpesvirus proteins related to herpes simplex virus type 1 ICP0 affect cellular structures and proteins, J. Virol., 74, 10006, 10.1128/JVI.74.21.10006-10017.2000 · DOI
- Kamitani, 1998, Characterization of a second member of the sentrin family of ubiquitin-like proteins, J. Biol. Chem., 273, 11349, 10.1074/jbc.273.18.11349 · DOI
- Mannen, 1996, Cloning and expression of human homolog HSMT3 to yeast SMT3 suppressor of MIF2 mutations in a centromere protein gene, Biochem. Biophys. Res. Commun., 222, 178, 10.1006/bbrc.1996.0717 · DOI
- Shao, 2004, Inhibition of small ubiquitin-related modifier-1 expression by Luteinizing hormone receptor stimulation is linked to induction of progesterone receptor during ovulation in mouse granulosa cells, Endocrinology, 145, 384, 10.1210/en.2003-0527 · DOI
- Su, 2002, Molecular features of human ubiquitin-like SUMO genes and their encoded proteins, Gene, 296, 65, 10.1016/S0378-1119(02)00843-0 · DOI
- Hay, 2001, Protein modification by SUMO, Trends Biochem. Sci., 26, 332, 10.1016/S0968-0004(01)01849-7 · DOI
- Li, 2003, The Ulp1 SUMO isopeptidase: distinct domains required for viability, nuclear envelope localization, and substrate specificity, J. Cell Biol., 160, 1069, 10.1083/jcb.200212052 · DOI
- Mossessova, 2000, Ulp1-SUMO crystal structure and genetic analysis reveal conserved interactions and a regulatory element essential for cell growth in yeast, Mol. Cell, 5, 865, 10.1016/S1097-2765(00)80326-3 · DOI
- Zhang, 2002, Enzymes of the SUMO modification pathway localize to filaments of the nuclear pore complex, Mol. Cell. Biol., 22, 6498, 10.1128/MCB.22.18.6498-6508.2002 · DOI
- Kim, 2000, A new SUMO-1-specific protease, SUSP1, that is highly expressed in reproductive organs, J. Biol. Chem., 275, 14102, 10.1074/jbc.275.19.14102 · DOI
- Murtas, 2003, A nuclear protease required for flowering-time regulation in Arabidopsis reduces the abundance of small ubiquitin-related modifier conjugates, Plant Cell, 15, 2308, 10.1105/tpc.015487 · DOI
- Villalva, 2002, Isolation of differentially expressed genes in NPM-ALK-positive anaplastic large cell lymphoma, Br. J. Haematol., 118, 791, 10.1046/j.1365-2141.2002.03671.x · DOI
- Azuma, 2001, Expression and regulation of the mammalian SUMO-1 E1 enzyme, FASEB J., 15, 1825, 10.1096/fj.00-0818fje · DOI
- Bailey, 2004, Characterization of the localization and proteolytic activity of the SUMO-specific protease, SENP1, J. Biol. Chem., 279, 692, 10.1074/jbc.M306195200 · DOI
- Holmstrom, 2003, Direct and distinguishable inhibitory roles for SUMO isoforms in the control of transcriptional synergy, Proc. Natl. Acad. Sci. U.S.A., 100, 15758, 10.1073/pnas.2136933100 · DOI
- Eaton, 2003, Modification of CCAAT/enhancer-binding protein-beta by the small ubiquitin-like modifier (SUMO) family members, SUMO-2 and SUMO-3, J. Biol. Chem., 278, 33416, 10.1074/jbc.M305680200 · DOI
- Tatham, 2001, Polymeric chains of SUMO-2 and SUMO-3 are conjugated to protein substrates by SAE1/SAE2 and Ubc9, J. Biol. Chem., 276, 35368, 10.1074/jbc.M104214200 · DOI
- Saitoh, 2000, Functional heterogeneity of small ubiquitin-related protein modifiers SUMO-1 versus SUMO-2/3, J. Biol. Chem., 275, 6252, 10.1074/jbc.275.9.6252 · DOI
- Azuma, 2003, SUMO-2/3 regulates topoisomerase II in mitosis, J. Cell Biol., 163, 477, 10.1083/jcb.200304088 · DOI
- Reverter, 2004, A basis of SUMO protease specificity provided by analysis of human Senp2 and a Senp2-SUMO complex, Structure, 12, 1519, 10.1016/j.str.2004.05.023 · DOI
Cited by
Sorted by citations
SUMOylation of the ubiquitin ligase IDOL decreases LDL receptor levels and is reversed by SENP1
Wang, J.-Q., Lin, Z.-C., Li, L.-L., Zhang, S.-F., Li, W.-H., Liu, W., Song, B.-L., & Luo, J. (2021) · Journal of Biological Chemistry · doi:10.1074/jbc.ra120.015420 · Cited by 24
Metadata
- Authors
- XU, Z., & AU, S. W. N.
- Affiliations
- Department of Biochemistry, Faculty of Science, The Chinese University of Hong Kong, Shatin, Hong Kong
- Venue
- Biochemical Journal
- Publisher
- Portland Press Ltd.
- Published
- 2005-02-22
- Volume
- 386
- Issue
- 2
- Pages
- 325-330
- ISSN
- 0264-6021
- 1470-8728
- Cited by
- 79
- References
- 0
- Language
- en
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review