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A procedure for mapping Arabidopsis mutations using co‐dominant ecotype‐specific PCR‐based markers
Abstract
A set of mapping markers have been designed for Arabidopsis thaliana that correspond to DNA fragments amplifed by the polymerase chain reaction (PCR). The ecotype of origin of these amplified fragments can be determined by cleavage with a restriction endo‐nuclease. Specifically, 18 sets of PCR primers were synthesized, each of which amplifies a single mapped DNA sequence from the Columbia and Landsberg erecta ecotypes. Also identifed was at least one restriction endonuclease for each of these PCR products that generates ecotype‐specific digestion patterns. Using these co‐dominant cleaved amplified polymorphic sequences (CAPS), an Arabidopsis gene can be unambiguously mapped to one of the 10 Arabidopsis chromosome arms in a single cross using a limited number of F 2 progeny.
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Citations
Cited by
A Putative Leucine-Rich Repeat Receptor Kinase Involved in Brassinosteroid Signal Transduction
Li, J., & Chory, J. (1997) · Cell · doi:10.1016/s0092-8674(00)80357-8 · Cited by 1,650
Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutant.
Aida, M., Ishida, T., Fukaki, H., Fujisawa, H., & Tasaka, M. (1997) · The Plant Cell · doi:10.1105/tpc.9.6.841 · Cited by 1,486
Di Laurenzio, L., Wysocka-Diller, J., Malamy, J. E., Pysh, L., Helariutta, Y., Freshour, G., Hahn, M. G., Feldmann, K. A., & Benfey, P. N. (1996) · Cell · doi:10.1016/s0092-8674(00)80115-4 · Cited by 1,124
MAX1 and MAX2 control shoot lateral branching in Arabidopsis
Stirnberg, P., van de Sande, K., & Leyser, H. M. O. (2002) · Development · doi:10.1242/dev.129.5.1131 · Cited by 692
Zhong, R., Kays, S. J., Schroeder, B. P., & Ye, Z.-H. (2002) · The Plant Cell · doi:10.1105/tpc.010278 · Cited by 641
Metadata
- Authors
- Konieczny, A., & Ausubel, F. M.
- Venue
- The Plant Journal
- Publisher
- Wiley
- Published
- 1993-08
- Volume
- 4
- Issue
- 2
- Pages
- 403-410
- ISSN
- 0960-7412 (ISSN-L)
- 1365-313X
- OpenAlex
- W1978751527
- Cited by
- 1,570
- References
- 0
- FWCI
- 17.80
- Type
- journal article
- Language
- en
- Open access
- closed
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- Konieczny, A., & Ausubel, F. M. (1993). A procedure for mapping Arabidopsis mutations using co‐dominant ecotype‐specific PCR‐based markers. The Plant Journal. https://doi.org/10.1046/j.1365-313x.1993.04020403.x
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
