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Ancient origins of axial patterning genes: Hox genes and ParaHox genes in the Cnidaria
Abstract
Among the bilaterally symmetrical, triploblastic animals (the Bilateria), a conserved set of developmental regulatory genes are known to function in patterning the anterior-posterior (AP) axis. This set includes the well-studied Hox cluster genes, and the recently described genes of the ParaHox cluster, which is believed to be the evolutionary sister of the Hox cluster (Brooke et al. 1998). The conserved role of these axial patterning genes in animals as diverse as frogs and flies is believed to reflect an underlying homology (i.e., all bilaterians derive from a common ancestor which possessed an AP axis and the developmental mechanisms responsible for patterning the axis). However, the origin and early evolution of Hox genes and ParaHox genes remain obscure. Repeated attempts have been made to reconstruct the early evolution of Hox genes by analyzing data from the triphoblastic animals, the Bilateria (Schubert et al. 1993; Zhang and Nei 1996). A more precise dating of Hox origins has been elusive due to a lack of sufficient information from outgroup taxa such as the phylum Cnidaria (corals, hydras, jellyfishes, and sea anemones). In combination with outgroup taxa, another potential source of information about Hox origins is outgroup genes (e.g., the genes of the ParaHox cluster). In this article, we present cDNA sequences of two Hox-like genes (anthox2 and anthox6) from the sea anemone, Nematostella vectensis. Phylogenetic analysis indicates that anthox2 (= Cnox2) is homologous to the GSX class of ParaHox genes, and anthox6 is homologous to the anterior class of Hox genes. Therefore, the origin of Hox genes and ParaHox genes occurred prior to the evolutionary split between the Cnidaria and the Bilateria and predated the evolution of the anterior-posterior axis of bilaterian animals. Our analysis also suggests that the central Hox class was invented in the bilaterian lineage, subsequent to their split from the Cnidaria.
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“Hox genes in Nematostella and other cnidarians are also expressed in spatial patterns consistent with an ancient role in embryonic development (54)(55)(56).”
From Sea Anemone Genome Reveals Ancestral Eumetazoan Gene Repertoire and Genomic Organization (2007) · cites this paper as [55]
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“Using the sea anemone Nematostella, John Finnerty presented evidence for linked Cnidarian Hox genes, and for Cnidarian ParaHox genes (Finnerty and Martindale 1999), members of the putative evolutionary sister to the Hox cluster (Brooke et al.”
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An evolutionarily conserved Hox-Gbx segmentation code in the rice coral Montipora capitataPreprint
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An evolutionarily conserved Hox-Gbx segmentation code in the rice coral Montipora capitataPreprint
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Irreducible Complexity of Hox Gene: A Path to the Canonical Function of the Hox Cluster (Review)
Kulakova, M. A., Maslakov, G. P., & Polyushkevich, L. O. (2024) · Biochemistry (Moscow) · doi:10.31857/s0320972524060012
Metadata
- Authors
- Finnerty, J. R., & Martindale, M. Q.
- Affiliations
- University of Chicago (US)
- Corresponding author
- Martindale, Mark Q.
- Venue
- Evolution & Development
- Publisher
- Wiley
- Published
- 1999-07
- Volume
- 1
- Issue
- 1
- Pages
- 16-23
- ISSN
- 1520-541X (ISSN-L)
- 1525-142X
- OpenAlex
- W2099219158
- Cited by
- 152
- References
- 31
- Citations by year
- 2025: 1 · 2024: 6 · 2023: 1 · 2022: 1 · 2020: 3 · 2018: 2 · 2017: 2 · 2016: 5 · 2014: 3 · 2013: 4
- FWCI
- 4.59
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Evolution & Development (publishedVersion)
- PubMed (publishedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Developmental Biology and Gene Regulation
- Life Sciences › Agricultural and Biological Sciences › Animal Science and Zoology › Marine Invertebrate Physiology and Ecology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Phylogenetic Studies
- Keywords
- Hox genes, ParaHox genes, axial patterning, anterior-posterior axis, Cnidaria, Nematostella vectensis, outgroup taxa, sea anemone
- MeSH terms
- Amino Acid Sequence, Animals, Base Sequence, Cnidaria, DNA, Genes, Homeobox, Molecular Sequence Data, Phylogeny, Sequence Homology, Amino Acid, Body Patterning
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