Some new directions in control theory inspired by systems biology

Cited by (171)

Items 101–171 of 171

1. Systems biology and control — A tutorial
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2. A control-theoretic approach to dynamic optimization of metabolic networks
   Diego Antonio Oyarz · 2010
3. Monotone and Near-Monotone Systems
   Eduardo D. Sontag · 2007 · Springer eBooks
4. Modélisation système de la thérapie photodynamique
   Thierry Bastogne, Loraine Tirand, Simona Dobre, Muriel Barberi‐Heyob, Alain Richard · 2006 · HAL
5. Continuous-switch piecewise quadratic models of biological networks: Application to bacterial growth
   Alfonso Carta, Madalena Chaves A, Jean‐Luc Gouzé · 2015 · Automatica
6. Control Strategies for the Regulation of the Eukaryotic Heat Shock Response
   Elena Czeizler, Eugen Czeizler, Ralph‐Johan Back, Ion Petre · 2009 · Lecture notes in computer science
7. A short overview of control in European R&D programmes (1983–2013): From local loop designs, through networked and coordinated control, to stochastic, large scale and real time optimization systems
   Alkis Konstantellos · 2013 · European Journal of Control
8. Methods for Biochemical Model Decomposition and Quantitative Submodel Comparison
   Andrzej Mizera, Elena Czeizler, Ion Petre · 2011 · Israel Journal of Chemistry
9. Set‐point regulation of monotone systems using the monotone small‐gain theorem
   Hamed Agahi, Mohammad Javad Yazdanpanah · 2013 · IET Control Theory and Applications
10. Robust H ∞ Control of DC Motor in the Presence of Input Delay and Disturbance by the Predictor‐Based Method
    Nima Maleki, Elahe Moradi · 2022 · Complexity
11. Systems bioengineering approaches for developmental toxicology
    Beatriz Xavier Soares, Cláudia C. Miranda, Tiago G. Fernandes · 2023 · Computational and Structural Biotechnology Journal
12. Hybrid Modeling for Systems Biology: Theory and Practice
    M. von Stosch, Nuno Carinhas, R. Oliveira · 2014 · Large-Scale Networks in Engineering and Life Sciences
13. Genetic Instability in Cancer: An Optimal Control Problem
    Frederic Y. M. Wan, Alexander V. Sadovsky, Natalia L. Komarova · 2010 · Studies in Applied Mathematics
14. Phase-translation group actions on strongly monotone skew-product semiflows
    Qiang Liu, Yi Wang · 2012 · Transactions of the American Mathematical Society
15. Process Control: A Relevant Approach
    Barry Barkel, PETER J. WOOLF · 2020 · ASEE Annual Conference & Exposition
16. Further remarks on delay dynamics in Oregonator models
    Hakkı Ulaş Ünal, Islam Boussaada, Silviu‐Iulian Niculescu · 2016 · International Conference on Control and Automation
17. Where physics and biology meet
    Wallace F. Marshall, Buzz Baum, Adrienne L. Fairhall, Carl‐Philipp Heisenberg, Elena F. Koslover, Andrea J. Liu, Yanlan Mao, Alex Mogilner, Celeste M. Nelson, Ewa K. Paluch et al. · 2024 · Current Biology
18. Stability analysis of a reduced transcription-translation model of RNA polymerase
    Ismail Belgacem, Edith Grac, Delphine Ropers, Jean‐Luc Gouzé · 2014 · IEEE Conference on Decision and Control (CDC)
19. Inference of Protein Function from the Structure of Interaction Networks
    Oliver Mason, Mark Verwoerd, Peter Clifford · 2010 · Birkhäuser Boston eBooks
20. Further results on singularly perturbed monotone systems, with an application to double phosphorylation cycles
    Liming Wang, Eduardo D. Sontag · 2007 · IEEE Conference on Decision and Control (CDC)
21. A grand challenge for research: multimodal, multilevel and multiscale systems in medicine and biology.
    Jean-Louis Coatrieux · 2005 · PubMed
22. Controllability of human cancer signaling network
    Vandana Ravindran, V. Sunitha, Ganesh Bagler · 2016
23. A systems science view on cell death signalling
    Thomas Eißing · 2007 · OPUS Publication Server of the University of Stuttgart (University of Stuttgart)
24. Predictive analysis of dynamical systems: combining discrete and continuous formalisms
    Madalena Chaves · 2013 · HAL
25. Circadian rhythms recovery based on slide mode controller
    Zhou Ren, Ren Haipeng, Huang Xiaona · 2015 · Chinese Control Conference (CCC)
26. Monotonicity and bistability of calcium/calmodulin-dependent protein kinase-phosphatase activation
    Ming Jie Wu, Douglas A. Lawrence · 2010 · Proceedings of the ... American Control Conference/Proceedings of the American Control Conference
27. Type-dependent stochastic Ising model describing the dynamics of a non-symmetric feedback module
    Manuel González-Navarrete · 2016 · Mathematical Biosciences & Engineering
28. Genetic Algorithms for Parameter Estimation in Circadian Model
    F. M. Janerio, Phuoc Vo Tan, Long Ton That, C. Nguyen Thai · 2017 · World Congress on Medical Physics and Biomedical Engineering, September 7 - 12, 2009, Munich, Germany
29. Importance and Implementation Strategies of Systems Medicine Education in India
    Durjoy Majumder, DK Ray, I Chatterjee, RK Gupta, Abhik Mukherjee · 2016 · Annals of Systems Biology
30. Multiscale Equation-Based Models: Insights for Inflammation and Physiological Variability
    Jeremy D. Scheff, Steve E. Calvano, Ioannis P. Androulakis · 2013 · Springer eBooks
31. Monotone and near-monotone network structure (part I)
    Eduardo D. Sontag · 2006 · arXiv (Cornell University)
32. Modelling and Analysis of Cell Death Signalling
    Thomas Eißing, Steffen Waldherr, Frank Allgöwer · 2007 · Springer eBooks
33. Some Remarks on Input Choices for Biochemical Systems
    Eduardo D. Sontag · 2006 · arXiv (Cornell University)
34. Signal Processing Challenges in The Post-Genomic Era
    A.A. Handzel · 2006 · IEEE International Conference on Acoustics Speech and Signal Processing
35. Hierarchies, Spikes, and Hybrid Systems: Physiologically Inspired Control Problems
    Andrew Lamperski · 2011 · CaltechTHESIS (California Institute of Technology)
36. Invariance and Sliding Modes. Application to coordination of multi-agent systems, bioprocesses estimation, and control in living cells
    Alejandro Vignoni · 2014
37. First Steps Towards a Geometry of Computation
    Michael Muskulus, Robert Brijder · 2005 · Deposito de Investigacion Universidad de Sevilla (University of Seville)
38. Regulation of the Secretory Pathway
    Anita Capalbo, Jorge Cancino, Alberto Luini · 2015 · Elsevier eBooks
39. Sistemas de partículas interagentes dependentes de tipo e aplicações ao estudo de redes de sinalização biológica
    Manuel González-Navarrete · 2011
40. Compound Activities in Times of Systems Biology
    David E. Patterson · 2011
41. Computational Methods for Quantitative Submodel Comparison
    Andrzej Mizera, Elena Czeizler, Ion Petre · 2012
42. Dynamics and asymptotic behaviors of biochemical networks
    Liming Wang · 2008 · Rutgers University Community Repository (Rutgers University)
43. Integrative simulation framework for modeling dynamic cellular phenomena in 3D over time
    Björn Edwin Oleson · 2008 · PUB – Publications at Bielefeld University (Bielefeld University)
44. A direct derivative method for estimating kinetic parameters of biological networks
    Jianfang Jia, Hong Yue · 2011
45. Robustness Analysis of Cellular Systems for In Silico Drug Discovery
    Thanneer Malai Perumal, Yan Ling Wu, Rudiyanto Gunawan · 2008 · IFAC Proceedings Volumes
46. Robust Control Approaches for Synchronization of Biochemical Oscillators
    Héctor Puebla, Rogelio Hernandez, Eliseo Hernandez, Margarita M. · 2011 · InTech eBooks
47. Mathematical Modeling of Metal Ion Homeostasis and Signaling Systems
    Jiangjun Cui · 2009 · UvA-DARE (University of Amsterdam)
48. Modeling cell-fractone dynamics using mathematical control theory
    Monique Chyba, J. Marriott, F. Mercier, John Rader, Giulio Telleschi · 2011 · IEEE Conference on Decision and Control (CDC)
49. Quiet Standing of Time-Delay Stability with Derivative Feedback Control
    Fitri Yakub, Ahmad Zahran Md Khudzari, Yasuchika Mori · 2014 · Springer eBooks
50. Heart rate variability and rhythmic influences in human endotoxemia
    Jeremy D. Scheff · 2013
51. strategies, perspectives and challenges Reverse engineering and identification in systems biology:
    Alejandro F. Villaverde, Julio R. Banga · 2014
52. Stability in Time-Delay Systems: Quiet Standing Case Study
    Fitri Yakub, Akira Kojima, Yasuchika Mori · 2013 · Bulletin of Electrical Engineering and Informatics
53. Dynamical Systems and Interaction Networks
    Bhaskar DasGupta, Jie Liang · 2016
54. The Futures of Biomedical Imaging
    Valérie Burdin, Jean‐Louis Dillenseger, Julien Montagner, Jean‐Claude Nunes, Jean-Louis Coatrieux, Christian Roux · 2008 · HAL
55. The Modeling and Analysis of the Apoptotic BAD/tBID/BAK Pathway as a Chemical Reaction Network
    Christopher C. Howells, William T. Baumann, Carla V. Finkielstein, Michael S. Hsiao, Douglas K. Lindner, Daniel J. Stilwell · 2010 · VTechWorks (Virginia Tech)
56. Feedback Control in Life and Society
    Spyros G. Tzafestaş · 2018 · International series on intelligent systems, control and automation: science and engineering
57. On enzymatic reactions: The role of a feedback from the substrate
    Pasquale J Palumbo, Mahsa Ghasemi, Mohammad Fakhroleslam · 2017 · IEEE Conference on Decision and Control (CDC)
58. Towards Interventions of Social and Economic Systems: A Control Theory Perspective
    Yan Zhang · 2018 · Repository for Publications and Research Data (ETH Zurich)
59. Adaptation and Parameter Estimation in Systems with Unstable Target Dynamics and Nonlinear Parametrization
    Ivan Tyukin, Danil V. Prokhorov, Cees van Leeuwen · 2005 · arXiv (Cornell University)
60. The Method of Construction and Analysis of Gene Regulatory Network
    Ming Zheng, Mugui Zhuo · 2019 · Advances in intelligent systems and computing
61. Biological patterning in networks of interacting cells
    Melinda Liu Perkins · 2020 · eScholarship (California Digital Library)
62. Hybrid Reactions Modeling for Top-down Design Framework
    Löıc Matthey · 2008
63. Normal Forms
    Christian Kuehn · 2014 · Applied mathematical sciences
64. Introduction
    2011 · CRC Press eBooks
65. Aspects of Control Theory
    2013 · Chapman & Hall/CRC eBooks
66. Multiscale Equation-Based Models: Insights for Inflammation and Physiological Variability
    Jeremy D. Scheff, Steve E. Calvano, Ioannis P. Androulakis · 2020 · Springer eBooks
67. Allosteric Rate Control of Chaos Governs Reaction Rate Kinetics
    Tjeerd V. olde Scheper, Alex Silverthorne, Holly Tonks, Karl Morten · 2025 · IEEE Transactions on Computational Biology and Bioinformatics
68. Biomedical Control Strategies for Inflammation in SARS-CoV-2-Induced Complement Activation
    Didar Murad, Iftikhar Ahmad, Rehan Zafar Paracha · 2025 · International Conference on Digital Futures and Transformative Technologies (ICoDT2)
69. From Pattern Differentiation to State-Space Medicine: A Control-Theoretic Framework for Whole-Patient Clinical Regulation in Traditional Chinese Medicine
    Bing Yuan · 2026 · SSRN Electronic Journal
70. Perspective on physical systems with a purpose: Using tunable degrees of freedom to enable function
    M. Lisa Manning · 2026 · Physical review. E
71. Modélisation Expérimentale des Systèmes Dynamiques - Applications en Biologie Systémique
    Thierry Bastogne · 2008 · HAL