Role of 2,4‐Diacetylphloroglucinol‐Producing Fluorescent Pseudomonas spp. in the Defense of Plant Roots

Abstract

Abstract: Plants have evolved strategies of stimulating and supporting specific groups of antagonistic microorganisms in the rhizosphere as a defense against diseases caused by soilborne plant pathogens owing to a lack of genetic resistance to some of the most common and widespread soilborne pathogens. Some of the best examples of natural microbial defense of plant roots occur in disease suppressive soils. Soil suppressiveness against many different diseases has been described. Take‐all is an important root disease of wheat, and soils become suppressive to take‐all when wheat or barley is grown continuously in a field following a disease outbreak; this phenomenon is known as take‐all decline (TAD). In Washington State, USA and The Netherlands, TAD results from the enrichment during monoculture of populations of 2,4‐diacetylphloroglucinol (2,4‐DAPG)‐producing Pseudomonas fluorescens to a density of 10 5 CFU/g of root, the threshold required to suppress the take‐all pathogen, Gaeumannomyces graminis var. tritici. 2,4‐DAPG‐producing P. fluorescens also are enriched by monoculture of other crops such as pea and flax, and evidence is accumulating that 2,4‐DAPG producers contribute to the defense of plant roots in many different agroecosystems. At this time, 22 distinct genotypes of 2,4‐DAPG producers (designated A ‐ T, PfY and PfZ) have been defined by whole‐cell repetitive sequence‐based (rep)‐PCR analysis, restriction fragment length polymorphism (RFLP) analysis of phlD, and phylogenetic analysis of phlD, but the number of genotypes is expected to increase. The genotype of an isolate is predictive of its rhizosphere competence on wheat and pea. Multiple genotypes often occur in a single soil and the crop species grown modulates the outcome of the competition among these genotypes in the rhizosphere. 2,4‐DAPG producers are highly effective biocontrol agents against a variety of plant diseases and ideally suited for serving as vectors for expressing other biocontrol traits in the rhizosphere.