The DOI matches its Crossref record; 7 of the 7 references it cites were found in a registry or an index.
Quantitative divergence of the bacterial root microbiota in Arabidopsis thaliana relatives
Open accessAbstract
Significance: All plants carry distinctive bacterial communities on and inside organs such as roots and leaves, collectively called the plant microbiota. How this microbiota diversifies in related plant species is unknown. We investigated the diversity of the bacterial root microbiota in the Brassicaceae family, including three Arabidopsis thaliana ecotypes, its sister species Arabidopsis halleri and Arabidopsis lyrata , and Cardamine hirsuta . We show that differences in root microbiota profiles between these hosts are largely quantitative and that host phylogenetic distance alone cannot explain the observed microbiota diversification. Our work also reveals a largely conserved and taxonomically narrow root microbiota, which comprises stable community members belonging to the Actinomycetales, Burkholderiales, and Flavobacteriales.
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Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing
Benjamini, Y., & Hochberg, Y. (1995) · Journal of the Royal Statistical Society Series B: Statistical Methodology · doi:10.1111/j.2517-6161.1995.tb02031.x · Cited by 109,482
QIIME allows analysis of high-throughput community sequencing data
Caporaso, J. G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F. D., Costello, E. K., Fierer, N., Peña, A. G., Goodrich, J. K., Gordon, J. I., et al. (2010) · Nature Methods · doi:10.1038/nmeth.f.303 · Cited by 34,887
A human gut microbial gene catalogue established by metagenomic sequencing
MetaHIT Consortium, Qin, J., Li, R., Raes, J., Arumugam, M., Burgdorf, K. S., Manichanh, C., Nielsen, T., Pons, N., Levenez, F., et al. (2010) · Nature · doi:10.1038/nature08821 · Cited by 11,624
UniFrac: a New Phylogenetic Method for Comparing Microbial Communities
Lozupone, C., & Knight, R. (2005) · Applied and Environmental Microbiology · doi:10.1128/aem.71.12.8228-8235.2005 · Cited by 8,227
Diversity, stability and resilience of the human gut microbiota
Lozupone, C. A., Stombaugh, J. I., Gordon, J. I., Jansson, J. K., & Knight, R. (2012) · Nature · doi:10.1038/nature11550 · Cited by 5,533
Evolution of mammals and their gut microbes
Ley, R. E., Hamady, M., Lozupone, C., Turnbaugh, P. J., Ramey, R. R., Bircher, J. S., Schlegel, M. L., Tucker, T. A., Schrenzel, M. D., Knight, R., et al. (2008) · Science · doi:10.1126/science.1155725 · Cited by 3,747
Structure and functions of the bacterial microbiota of plants
Bulgarelli, D., Schlaeppi, K., Spaepen, S., van Themaat, E. V. L., & Schulze-Lefert, P. (2013) · Annual Review of Plant Biology · doi:10.1146/annurev-arplant-050312-120106 · Cited by 3,308
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Hardoim, P. R., van Overbeek, L. S., Berg, G., Pirttilä, A. M., Compant, S., Campisano, A., Döring, M., & Sessitsch, A. (2015) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00050-14 · Cited by 2,708
Hu, L., Robert, C. A. M., Cadot, S., Zhang, X., Ye, M., Li, B., Manzo, D., Chervet, N., Steinger, T., van der Heijden, M. G. A., et al. (2018) · Nature Communications · doi:10.1038/s41467-018-05122-7 · Cited by 1,626
Self-citationStructure and Function of the Bacterial Root Microbiota in Wild and Domesticated Barley
Bulgarelli, D., Garrido-Oter, R., Münch, P. C., Weiman, A., Dröge, J., Pan, Y., McHardy, A. C., & Schulze-Lefert, P. (2015) · Cell Host & Microbe · doi:10.1016/j.chom.2015.01.011 · Cited by 1,420
Self-citationFunctional overlap of the Arabidopsis leaf and root microbiota
Bai, Y., Müller, D. B., Srinivas, G., Garrido-Oter, R., Potthoff, E., Rott, M., Dombrowski, N., Münch, P. C., Spaepen, S., Remus-Emsermann, M., et al. (2015) · Nature · doi:10.1038/nature16192 · Cited by 1,345
Self-citationNRT1.1B is associated with root microbiota composition and nitrogen use in field-grown rice
Zhang, J., Liu, Y.-X., Zhang, N., Hu, B., Jin, T., Xu, H., Qin, Y., Yan, P., Zhang, X., Guo, X., et al. (2019) · Nature Biotechnology · doi:10.1038/s41587-019-0104-4 · Cited by 1,119
Metadata
- Authors
- Schlaeppi, K., Dombrowski, N., Oter, R. G., Ver Loren van Themaat, E., & Schulze-Lefert, P.
- Venue
- Proceedings of the National Academy of Sciences
- Published
- 2013-12-30
- Volume
- 111
- Issue
- 2
- Pages
- 585-592
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- OpenAlex
- W2046205296
- Cited by
- 541
- References
- 7
- FWCI
- 27.68
- Type
- journal article
- Language
- en
- Open access
- green
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- Schlaeppi, K., Dombrowski, N., Oter, R. G., Ver Loren van Themaat, E., & Schulze-Lefert, P. (2014). Quantitative divergence of the bacterial root microbiota in Arabidopsis thaliana relatives. Proceedings of the National Academy of Sciences. https://doi.org/10.1073/pnas.1321597111
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
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