Cited by 65DNA Repair MechanismsMitochondrial Function and PathologyRedox biology and oxidative stress

Mitochondrial reactive oxygen species are scavenged by Cockayne syndrome B protein in human fibroblasts without nuclear DNA damage

Open access
Cleaver, James E., Brennan-Minnella, Angela M., Swanson, Raymond A., Fong, Ka-wing, Chen, Junjie, Chou, Kai-ming, Chen, Yih-wen, Revet, Ingrid +1 more·2014·Proceedings of the National Academy of Sciences

Abstract

Cockayne syndrome (CS) is a human DNA repair-deficient disease that involves transcription coupled repair (TCR), in which three gene products, Cockayne syndrome A (CSA), Cockayne syndrome B (CSB), and ultraviolet stimulated scaffold protein A (UVSSA) cooperate in relieving RNA polymerase II arrest at damaged sites to permit repair of the template strand. Mutation of any of these three genes results in cells with increased sensitivity to UV light and defective TCR. Mutations in CSA or CSB are associated with severe neurological disease but mutations in UVSSA are for the most part only associated with increased photosensitivity. This difference raises questions about the relevance of TCR to neurological disease in CS. We find that CSB-mutated cells, but not UVSSA-deficient cells, have increased levels of intramitochondrial reactive oxygen species (ROS), especially when mitochondrial complex I is inhibited by rotenone. Increased ROS would result in oxidative damage to mitochondrial proteins, lipids, and DNA. CSB appears to behave as an electron scavenger in the mitochondria whose absence leads to increased oxidative stress. Mitochondrial ROS, however, did not cause detectable nuclear DNA damage even when base excision repair was blocked by an inhibitor of polyADP ribose polymerase. Neurodegeneration in Cockayne syndrome may therefore be associated with ROS-induced damage in the mitochondria, independent of nuclear TCR. An implication of our present results is that mitochondrial dysfunction involving ROS has a major impact on CS-B pathology, whereas nuclear TCR may have a minimal role.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1073/pnas.1414135111

Cites

4 of 4 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Flagged first, then by citations

Research works printed but not linked: 20

  1. [25]Fei J, Chen J (2012) KIAA1530 protein is recruited by Cockayne syndrome complementation group protein A (CSA) to participate in transcription-coupled repair (TCR). J Biol Chem 287(42):35118 -35126.
  2. [26]Brennan AM, et al. (2009) NADPH oxidase is the primary source of superoxide induced by NMDA receptor activation. Nat Neurosci 12(7):857 -863.
  3. [27]Chen P, et al. (2003) Oxidative stress is responsible for deficient survival and dendritogenesis in purkinje neurons from ataxia-telangiectasia mutated mutant mice. J Neurosci 23(36):11453 -11460.
  4. [28]Noppe G, et al. (2009) Rapid flow cytometric method for measuring senescence associated beta-galactosidase activity in human fibroblasts. Cytometry A 75(11):910 -916.
  5. [29]Cleaver JE, Bezrookove V, Revet I, Huang EJ (2013) Conceptual developments in the causes of Cockayne syndrome. Mech Ageing Dev 134(5-6):284 -290.
  6. [30]Masson M, et al. (1998) XRCC1 is specifically associated with poly(ADP-ribose) polymerase and negatively regulates its activity following DNA damage. Mol Cell Biol 18(6):3563 -3571.
  7. [32]D ' Errico M, et al. (2007) The role of CSA in the response to oxidative DNA damage in human cells. Oncogene 26(30):4336 -4343.
  8. [33]Morais VA, et al. (2014) PINK1 loss-of-function mutations affect mitochondrial complex I activity via NdufA10 ubiquinone uncoupling. Science 344(6180):203 -207.
  9. [34]Scheibye-Knudsen M, et al. (2012) Cockayne syndrome group B protein prevents the accumulation of damaged mitochondria by promoting mitochondrial autophagy. J Exp Med 209(4):855 -869.
  10. [35]Revet I, Feeney L, Tang AA, Huang EJ, Cleaver JE (2012) Dysmyelination not demyelination causes neurological symptoms in preweaned mice in a murine model of Cockayne syndrome. Proc Natl Acad Sci USA 109(12):4627 -4632.
  11. [36]Laposa RR, Huang EJ, Cleaver JE (2007) Increased apoptosis, p53 up-regulation, and cerebellar neuronal degeneration in repair-deficient Cockayne syndrome mice. Proc Natl Acad Sci USA 104(4):1389 -1394.
  12. [37]Guo Z, Kozlov S, Lavin MF, Person MD, Paull TT (2010) ATM activation by oxidative stress. Science 330(6003):517 -521.
  13. [38]Lowndes NF, Toh GW-L (2005) DNA repair: The importance of phosphorylating histone H2AX. Curr Biol 15(3):R99 -R102.
  14. [39]Revet I, et al. (2011) Functional relevance of the histone gammaH2Ax in the response to DNA damaging agents. Proc Natl Acad Sci USA 108(21):8663 -8667.
  15. [40]de Feraudy S, Revet I, Bezrookove V, Feeney L, Cleaver JE (2010) A minority of foci or pan-nuclear apoptotic staining of gammaH2AX in the S phase after UV damage contain DNA double-strand breaks. Proc Natl Acad Sci USA 107(15):6870 -6875.
  16. [41]Hoffmann S, Spitkovsky D, Radicella JP, Epe B, Wiesner RJ (2004) Reactive oxygen species derived from the mitochondrial respiratory chain are not responsible for the basal levels of oxidative base modifications observed in nuclear DNA of mammalian cells. Free Radic Biol Med 36(6):765 -773.
  17. [42]Kuraoka I, et al. (2000) Removal of oxygen free-radical-induced 5 ′ ,8-purine cyclodeoxynucleosides from DNA by the nucleotide excision-repair pathway in human cells. Proc Natl Acad Sci USA 97(8):3832 -3837.
  18. [43]Brooks PJ (2007) The case for 8,5 ′ -cyclopurine-2 ′ -deoxynucleosides as endogenous DNA lesions that cause neurodegeneration in xeroderma pigmentosum. Neuroscience 145(4):1407 -1417.
  19. [44]Citterio E, et al. (1998) Biochemical and biological characterization of wild-type and ATPase-deficient Cockayne syndrome B repair protein. J Biol Chem 273(19):11844 -11851.
  20. [45]Van Raamsdonk CD, et al. (2009) Frequent somatic mutations of GNAQ in uveal melanoma and blue naevi. Nature 457(7229):599 -602.

Cited by

Sorted by citations

Authors
Cleaver, J. E., Brennan-Minnella, A. M., Swanson, R. A., Fong, K.-W., Chen, J., Chou, K.-M., Chen, Y.-W., Revet, I., & Bezrookove, V.
Affiliations
  • University of California, San Francisco (US)
  • Department of Neurology, University of California, San Francisco and Veterans Affairs Medical Center, San Francisco, CA 94121;
  • San Francisco VA Medical Center (US)
  • The University of Texas MD Anderson Cancer Center (US)
  • Indiana University Indianapolis (US)
  • California Pacific Medical Center (US)
Corresponding author
Cleaver, James E.
Venue
Proceedings of the National Academy of Sciences
Published
2014-08-18
Volume
111
Issue
37
Pages
13487-13492
ISSN
  • 0027-8424 (ISSN-L)
  • 1091-6490
OpenAlex
W2148713962
Cited by
65
References
4
Citations by year
2026: 2 · 2025: 1 · 2024: 4 · 2023: 1 · 2022: 6 · 2021: 8 · 2020: 5 · 2019: 5 · 2018: 6 · 2017: 8 · 2016: 12 · 2015: 5 · 2014: 2
FWCI
3.69
Type
journal article
Language
en
Open access
Locations
  • Proceedings of the National Academy of Sciences (publishedVersion)
  • Europe PMC (PubMed Central) (publishedVersion)
  • PubMed Central (publishedVersion)
  • PubMed (publishedVersion)
  • eScholarship (California Digital Library) (submittedVersion)
  • IUScholarWorks (Indiana University) (submittedVersion)
  • PMC
Funders
  • U.S. Department of Veterans Affairs
  • National Institutes of Health
  • U.S. Public Health Service (1R01052781)
  • National Cancer Institute (CA 092312, CA112446, R01CA112446, R01CA092312)
  • National Institute of Neurological Disorders and Stroke (R01NS081149, NS 041421, R01NS041421)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA Repair Mechanisms
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Mitochondrial Function and Pathology
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Redox biology and oxidative stress
Keywords
Cockayne syndrome, mitochondrial reactive oxygen species, oxidative stress, transcription-coupled repair, mitochondrial complex I, rotenone, neurodegeneration, base excision repair, mitochondrial dysfunction, human fibroblasts
MeSH terms
Poly-ADP-Ribose Binding Proteins, Carrier Proteins, Cell Line, Cell Nucleus, DNA Damage, DNA Helicases, Ethidium, Fibroblasts, Histones, Humans, Hydrogen Peroxide, Mitochondria, Oxidation-Reduction, Rotenone, Ultraviolet Rays, Reactive Oxygen Species, DNA Repair Enzymes

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review