A carbonate-rich lake solution to the phosphate problem of the origin of life
Open accessAbstract
Significance: Phosphate is crucial for the origin of life because it is ubiquitous in key biomolecules. A major issue is that prebiotic syntheses use concentrated phosphate to incorporate phosphate into biomolecules, whereas natural waters are generally phosphate-poor because phosphate reacts with calcium to form low-solubility apatite minerals. Here we show that carbonate-rich lakes can concentrate phosphate to >1 molal levels by locking up calcium in carbonate minerals, which prevents phosphate removal by apatite precipitation. Phosphate-rich lakes may have preferentially formed on the prebiotic Earth because of carbonic acid weathering under CO 2 -rich atmospheres and the absence of microbial phosphate consumption. This specifically points to an origin of life in carbonate-rich lakes, and so defines aqueous conditions that prebiotic chemists should consider.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
With six reactive species, formaldehyde, HCN, formamide, ammonia, hydrogen sulfide, and water, plus an inorganic phosphate source, it should be possible to build most of the structural complexity of the main biological molecular components.
“With these six reactive species in hand, and some inorganic phosphate source,42,43 it should be possible to build most of the structural complexity comprising the main biological molecular components.”
From The protometabolic nature of prebiotic chemistry (2023) · cites this paper as [43]
Phosphate has always presented problems in prebiotic chemistry because of its low solubility in contact with calcium to generate apatite, which is more or less insoluble.
“Phosphate has always presented problems in prebiotic chemistry because of its low solubility in contact with calcium to generate apatite, which is more or less insoluble, leading to various suggestions, that certain kinds of carbonate rich lakes existed on the primordial Earth that maintained phosphate in solution (Toner and Catling, 2020).”
From Serpentinization as the source of energy, electrons, organics, catalysts, nutrients and pH gradients for the origin of LUCA and life (2023) · cites this paper as Toner and Catling, 2020
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Westheimer, F. H. (1987) · Science · doi:10.1126/science.2434996 · Cited by 1,711 · cited 1× · see citing works
“…of life | early Earth | carbonate-rich lakes P hosphate is central to the origin of life (1 – 4) because it is a key component of nucleotides, phospholipids, and metabolites such as adenosine triphosphate used in cellular replication, compartmentalization, and energy transfer, respectively (5).”
Zahnle, K., Schaefer, L., & Fegley, B. (2010) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a004895 · Cited by 298 · see citing works
The Role of Lipid Membranes in Life’s Origin
Deamer, D. (2017) · Life · doi:10.3390/life7010005 · Cited by 261 · cited 1× · see citing works
“A difficulty for an origin of life in saline lakes is that high salt concentrations tend to destabilize lipid vesicles (56) and inhibit RNA oligimerization (57), but these issues are potentially resolvable.”
Urea-Inorganic Phosphate Mixtures as Prebiotic Phosphorylating Agents
Lohrmann, R., & Orgel, L. E. (1971) · Science · doi:10.1126/science.171.3970.490 · Cited by 245 · see citing works
Dry/Wet Cycling and the Thermodynamics and Kinetics of Prebiotic Polymer Synthesis
Ross, D., & Deamer, D. (2016) · Life · doi:10.3390/life6030028 · Cited by 157 · see citing works
Burcar, B., Pasek, M., Gull, M., Cafferty, B. J., Velasco, F., Hud, N. V., & Menor‐Salván, C. (2016) · Angewandte Chemie International Edition · doi:10.1002/anie.201606239 · Cited by 141 · see citing works
Prebiotic condensation through wet–dry cycling regulated by deliquescence
Campbell, T. D., Febrian, R., McCarthy, J. T., Kleinschmidt, H. E., Forsythe, J. G., & Bracher, P. J. (2019) · Nature Communications · doi:10.1038/s41467-019-11834-1 · Cited by 136 · see citing works
Phosphorylation on the Early Earth
Pasek, M. A., Gull, M., & Herschy, B. (2017) · Chemical Geology · doi:10.1016/j.chemgeo.2017.11.008 · Cited by 129 · see citing works
Black, R. A., Blosser, M. C., Stottrup, B. L., Tavakley, R., Deamer, D. W., & Keller, S. L. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1300963110 · Cited by 123 · see citing works
Mimicking the Surface and Prebiotic Chemistry of Early Earth Using Flow Chemistry
Ritson, D. J., Battilocchio, C., Ley, S. V., & Sutherland, J. D. (2018) · Nature Communications · doi:10.1038/s41467-018-04147-2 · Cited by 89 · see citing works
Flagged first, then by citations
Research works printed but not linked: 34
- [3]Pasek M. A., Kee T. P., “On the origin of phosphorylated biomolecules” in Origins of Life: The Primal Self-Organization, Egal R., Lankenau D.-H., Mulkidjanian A. Y., Eds. (Springer, Berlin, 2011), pp. 57– 84.
- [4]Schwartz A. W., Phosphorus in prebiotic chemistry. Philos. Trans. R. Soc. Lond. B Biol. Sci. 361, 1743– 1749, discussion 1749 (2006). 17008215 PMC1664685
- [6]Lindsay W. L., Chemical Equilibria in Soils (John Wiley & Sons, New York, 1979).
- [7]Fernández-García C., Coggins A. J., Powner M. W., A chemist’s perspective on the role of phosphorus at the origins of life. Life (Basel) 7, 1– 23 (2017). PMC5617956 28703763
- [8]Powner M. W., Gerland B., Sutherland J. D., Synthesis of activated pyrimidine ribonucleotides in prebiotically plausible conditions. Nature 459, 239– 242 (2009). 19444213
- [9]Handschuh G. J., Orgel L. E., Struvite and prebiotic phosphorylation. Science 179, 483– 484 (1973). 17739141
- [10]Gull M., Pasek M. A., Is struvite a prebiotic mineral? Life (Basel) 3, 321– 330 (2013). 25369744 PMC4187136
- [11]Gibard C., Bhowmik S., Karki M., Kim E. K., Krishnamurthy R., Phosphorylation, oligomerization and self-assembly in water under potential prebiotic conditions. Nat. Chem. 10, 212– 217 (2018). 29359747 PMC6295206
- [12]Saladino R., Crestini C., Pino S., Costanzo G., Di Mauro E., Formamide and the origin of life. Phys. Life Rev. 9, 84– 104 (2012). 22196896
- [14]Keefe A. D., Miller S. L., Potentially prebiotic syntheses of condensed phosphates. Orig. Life Evol. Biosph. 26, 15– 25 (1996). 11536744
- [15]Karki M., Gibard C., Bhowmik S., Krishnamurthy R., Nitrogenous derivatives of phosphorus and the origins of life: Plausible prebiotic phosphorylating agents in water. Life (Basel) 7, 1– 28 (2017). PMC5617957 28758921
- [16]Pasek M. A., Rethinking early Earth phosphorus geochemistry. Proc. Natl. Acad. Sci. U.S.A. 105, 853– 858 (2008). 18195373 PMC2242691
- [17]Deamer D. W., Assembling Life: How Can Life Begin on Earth and Other Habitable Planets? (Oxford University Press, 2018).
- [18]Mulkidjanian A. Y., Bychkov A. Y., Dibrova D. V., Galperin M. Y., Koonin E. V., Origin of first cells at terrestrial, anoxic geothermal fields. Proc. Natl. Acad. Sci. U.S.A. 109, E821– E830 (2012). 22331915 PMC3325685
- [20]Hirst J. F., “Sedimentology, diagenesis and hydrochemistry of the saline, alkaline lakes on the Cariboo Plateau, Interior British Columbia, Canada,” PhD thesis, University of Saskatchewan, Saskatoon (2013).
- [24]Mono Basin Ecosystem Study Committee and National Research Council, “The Mono Basin ecosystem: Effects of changing lake level” (National Academies Press, Washington, DC, 1987), p. 272.
- [26]Eugster H. P., Hardie L. A., “Saline lakes” in Lakes (Springer, New York, 1978), pp. 237– 293.
- [30]McConnell D., Apatite: Its Crystal Chemistry, Mineralogy, Utilization, and Geologic and Biologic Occurrences (Springer-Verlag, New York, 1973).
- [35]Krissansen-Totton J., Arney G. N., Catling D. C., Constraining the climate and ocean pH of the early Earth with a geological carbon cycle model. Proc. Natl. Acad. Sci. U.S.A. 115, 4105– 4110 (2018). 29610313 PMC5910859
- [38]Jones B. E., Grant W. D., Duckworth A. W., Owenson G. G., Microbial diversity of soda lakes. Extremophiles 2, 191– 200 (1998). 9783165
- [39]Condie K. C., Earth as an Evolving Planetary System (Academic Press, ed. 3, 2016).
- [43]Fredriksson K., Dube A., Milton D. J., Balasundaram M. S., Lonar Lake, India: An impact crater in basalt. Science 180, 862– 864 (1973). 17789256
- [49]Stüeken E. E., Did life originate from a global chemical reactor? Geobiology 11, 101– 126 (2013). 23331348
- [52]Hazen R. M., Sverjensky D. A., Mineral surfaces, geochemical complexities, and the origins of life. Cold Spring Harb. Perspect. Biol. 2, a002162 (2010). 20452963 PMC2857174
- [53]Patel B. H., Percivalle C., Ritson D. J., Duffy C. D., Sutherland J. D., Common origins of RNA, protein and lipid precursors in a cyanosulfidic protometabolism. Nat. Chem. 7, 301– 307 (2015). 25803468 PMC4568310
- [55]Ricardo A., Carrigan M. A., Olcott A. N., Benner S. A., Borate minerals stabilize ribose. Science 303, 196 (2004). 14716004
- [57]Miyakawa S., Studies in the mineral and salt-catalyzed formation of RNA oligomers. Orig. Life Evol. Biosph. 36, 343– 361 (2006). 16915351
- [59]Cornell C. E., Prebiotic amino acids bind to and stabilize prebiotic fatty acid membranes. Proc. Natl. Acad. Sci. U.S.A. 116, 17239– 17244 (2019). 31405964 PMC6717294
- [61]Burcar B., A Stark contrast to modern Earth: Phosphate mineral transformation and nucleoside phosphorylation in an iron and cyanide‐rich Early Earth scenario. Angew. Chem. Int. Ed. Engl. 58, 16981– 16987 (2019). 31460687
- [62]Ranjan S., Todd Z. R., Sutherland J. D., Sasselov D. D., Sulfidic anion concentrations on early earth for surficial origins-of-life chemistry. Astrobiology 18, 1023– 1040 (2018). 29627997 PMC6225604
- [63]Appelo C. A. J., Postma D., Geochemistry, Groundwater and Pollution (CRC Press, Boca Raton, FL, ed. 2, 2005).
- [64]McCann H. G., The solubility of fluorapatite and its relationship to that of calcium fluoride. Arch. Oral Biol. 13, 987– 1001 (1968). 5250212
- [67]Scharge T., “Thermodynamic database for phosphate” in Thermodynamic Reference Database (THEREDA, 2017), pp. 1– 24.
- [70]Allison I. S., Mason R. S., Sodium Salts of Lake County, Oregon. (Oregon Department of Geology and Mineral Industries, 1947), vol. 17, pp. 1– 12.
Cited by
Sorted by citations
Detection of phosphates originating from Enceladus’s ocean
Postberg, F., Sekine, Y., Klenner, F., Glein, C. R., Zou, Z., Abel, B., Furuya, K., Hillier, J. K., Khawaja, N., Kempf, S., et al. (2023) · Nature · doi:10.1038/s41586-023-05987-9 · Cited by 154 · see citing works
Pulletikurti, S., Yadav, M., Springsteen, G., & Krishnamurthy, R. (2022) · Nature Chemistry · doi:10.1038/s41557-022-00999-w · Cited by 78 · see citing works
Kadoya, S., Krissansen‐Totton, J., & Catling, D. C. (2020) · Geochemistry, Geophysics, Geosystems · doi:10.1029/2019gc008734 · Cited by 72 · see citing works
“In addition, cold, carbonate-rich lakes (with quasi-neutral to basic basic) concentrate cyanide and phosphate (Toner & Catling, 2019; 2019), which are essential reagents for prebiotic schemes that have had considerable success in recent years in making biomolecules with relatively high yield and…”
BackgroundInfluentialSelf-citationSchwander, L., Brabender, M., Mrnjavac, N., Wimmer, J. L. E., Preiner, M., & Martin, W. F. (2023) · Frontiers in Microbiology · doi:10.3389/fmicb.2023.1257597 · Cited by 65 · see citing works
The protometabolic nature of prebiotic chemistry
Nogal, N., Sanz-Sánchez, M., Vela-Gallego, S., Ruiz-Mirazo, K., & de la Escosura, A. (2023) · Chemical Society Reviews · doi:10.1039/d3cs00594a · Cited by 61 · see citing works
Serpentinization as a route to liberating phosphorus on habitable worlds
Pasek, M. A., Omran, A., Feng, T., Gull, M., Lang, C., Abbatiello, J., Garong, L., Johnston, R., Ryan, J., & Abbott-Lyon, H. (2022) · Geochimica et Cosmochimica Acta · doi:10.1016/j.gca.2022.09.027 · Cited by 50 · see citing works
Prebiotic Photochemical Coproduction of Purine Ribo- and Deoxyribonucleosides
Xu, J., Green, N. J., Russell, D. A., Liu, Z., & Sutherland, J. D. (2021) · Journal of the American Chemical Society · doi:10.1021/jacs.1c07403 · Cited by 38 · see citing works
Amino acids catalyse RNA formation under ambient alkaline conditions
Rout, S. K., Wunnava, S., Krepl, M., Cassone, G., Šponer, J. E., Mast, C. B., Powner, M. W., & Braun, D. (2025) · Nature Communications · doi:10.1038/s41467-025-60359-3 · Cited by 15 · see citing works
- Authors
- Toner, J. D., & Catling, D. C.
- Affiliations
- University of Washington (US)
- Corresponding author
- Toner, Jonathan D.
- Venue
- Proceedings of the National Academy of Sciences
- Publisher
- National Academy of Sciences
- Published
- 2019-12-30
- Volume
- 117
- Issue
- 2
- Pages
- 883-888
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- PMC
- PMC6969521
- OpenAlex
- W2996847227
- Cited by
- 201
- References
- 10
- Citations by year
- 2026: 23 · 2025: 38 · 2024: 35 · 2023: 36 · 2022: 30 · 2021: 24 · 2020: 14 · 2019: 1
- FWCI
- 9.21
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Proceedings of the National Academy of Sciences (publishedVersion, cc-by-nc-nd)
- PubMed Central (publishedVersion, cc-by-nc-nd)
- PubMed (publishedVersion)
- Funders
- Simons Collaboration on the Origin of Life (511570)
- Topics
- Physical Sciences › Physics and Astronomy › Astronomy and Astrophysics › Origins and Evolution of Life
- Physical Sciences › Earth and Planetary Sciences › Paleontology › Paleontology and Stratigraphy of Fossils
- Physical Sciences › Physics and Astronomy › Astronomy and Astrophysics › Space Science and Extraterrestrial Life
- Keywords
- origin of life, phosphate, apatite precipitation, calcium carbonate minerals, phosphate concentration, CO2-rich atmosphere, prebiotic chemistry, aqueous chemistry
- MeSH terms
- Origin of Life, Apatites, Calcium, Carbon Dioxide, Carbonates, Cell Membrane, Hydrogen-Ion Concentration, Minerals, Models, Biological, Phosphates, Solubility, Rivers, Lakes
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review