Mechanism Responsible for Oligomycin-Induced Occlusion of Na+ within Na/K-ATPase
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The mechanism whereby oligomycin occludes Na+ within Na/K-ATPase was investigated to study Na+ and K+ transport mechanisms. Oligomycin stimulated Na+ binding to Na/K-ATPase but inhibited Na-K and Na-Na exchange. The oligomycin concentration required to stimulate Na+ binding to half-maximal was 4.5 microM, which was close to the concentration that reduced Na-Na and Na-K exchange and ATPase activity to half-maximal, suggesting that Na/K-ATPase possesses an oligomycin binding site responsible for stimulating Na+ binding and reducing ion exchange and ATPase activity. In contrast, neither K+ binding nor K+ transport was affected by oligomycin. Limited tryptic digestion of Na/K-ATPase showed that, unlike Na+, K+, and ouabain, oligomycin treatment did not result in a specific digestion pattern. Oligomycin appeared to inhibit ouabain binding in a noncompetitive manner, whereas it did not affect ATP binding. Na/K-ATPase isoforms with low and high sensitivities to ouabain were equally sensitive to oligomycin. These results suggest that the oligomycin binding site is located on the extracellular side of Na/K-ATPase, at a different position from the ouabain binding site, and this antibiotic did not induce a conformational change of Na/K-ATPase. We propose that oligomycin interacts with the Na+ occlusion site from the extracellular side of Na/K-ATPase, which delays Na+ release to the extracellular side without inducing a conformational change, suggesting that the pathways responsible for Na+ and K+ transport differ.
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1 μg/mL oligomycin (10 times more than 0.1 μg/mL) elicits minor nonspecific effects and is common in the literature.
“However, we used 10 times more oligomycin in our experiments since this oligomycin concentration elicits minor nonspecific effects and it is common in the literature [15,25,26,27].”
From Proliferating Astrocytes in Primary Culture Do Not Depend upon Mitochondrial Respiratory Complex I Activity or Oxidative Phosphorylation (2023) · cites this paper as [25]
The Methods passage reports using 5 μg/mL oligomycin, but does not establish that 1 μg/mL is commonly used. The Discussion mentions high nonspecific binding, not minor nonspecific effects at 1 μg/mL. Searches for the stated concentration, nonspecific effects, and common use found no passage addressing the claim. (LLM, conf=0.72)
Experimental — accuracy not yet measured1 μg/mL oligomycin causes a minor nonspecific effect on mitochondrial and cellular function.
“the use of this oligomycin concentration is common in the literature and causes a minor nonspecific effect on mitochondrial and cellular function [15,25,26,27].”
From Proliferating Astrocytes in Primary Culture Do Not Depend upon Mitochondrial Respiratory Complex I Activity or Oxidative Phosphorylation (2023) · cites this paper as [25]
The Results and Discussion report concentration-dependent effects of oligomycin on Na/K-ATPase and ion exchange, not on mitochondrial or overall cellular function. Searches for 1 μg/mL and mitochondrial or nonspecific effects found no passage assessing whether that dose causes a minor nonspecific effect. (LLM, conf=0.75)
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Research works printed but not linked: 5
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Silva, E. A., Dalla Costa, A. P., Ruas, J. S., Siqueira-Santos, E. S., Francisco, A., & Castilho, R. F. (2023) · Cells · doi:10.3390/cells12050683 · Cited by 5 · see citing works
- Authors
- Teruyo, A.-O., Matsui, H., Wakizaka, A., & Homareda, H.
- Affiliations
- Kyorin University (JP)
- Corresponding author
- Homareda, Haruo
- ORCID
- Matsui, Hideo
- Venue
- Journal of Biological Chemistry
- Publisher
- Elsevier BV
- Published
- 1996-10
- Volume
- 271
- Issue
- 41
- Pages
- 25604-25610
- ISSN
- 0021-9258 (ISSN-L)
- OpenAlex
- W1965716892
- Cited by
- 36
- References
- 0
- Citations by year
- 2026: 2 · 2024: 1 · 2023: 1 · 2021: 2 · 2019: 1 · 2016: 1 · 2014: 2 · 2013: 3 · 2012: 1
- FWCI
- 0.48
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Journal of Biological Chemistry (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › ATP Synthase and ATPases Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Ion Transport and Channel Regulation
- Health Sciences › Medicine › Oncology › Drug Transport and Resistance Mechanisms
- Keywords
- oligomycin, Na+/K+-ATPase, sodium ion binding, Na+/Na+ exchange, Na+/K+ exchange, ouabain binding sites, ATPase inhibition, ion transport, extracellular binding site, ATP binding, isozymes
- MeSH terms
- Sodium-Potassium-Exchanging ATPase, Animals, Binding Sites, Cattle, Dogs, Kidney, Kidney Medulla, Kinetics, Microsomes, Models, Structural, Oligomycins, Ouabain, Peptide Fragments, Potassium, Protein Conformation, Rubidium, Sodium
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