Cited by 115Protein Kinase Regulation and GTPase SignalingCellular transport and secretionReceptor Mechanisms and Signaling

Trp56 of Rac1 Specifies Interaction with a Subset of Guanine Nucleotide Exchange Factors

Open access
Gao, Yuan, Xing, Jingchuan, Streuli, Michel, Leto, Thomas L., Zheng, Yi·2001·Journal of Biological Chemistry

Abstract

Signaling specificity of Rho GTPase pathways is achieved in part by selective interaction between members of the Dbl family guanine nucleotide exchange factors (GEFs) and their Rho GTPase substrates. For example, Trio, GEF-H1, and Tiam1 are a subset of GEFs that specifically activate Rac1 but not the closely related Cdc42. The Rac1 specificity of these GEFs appears to be governed by Rac1-GEF binding interaction. To understand the detailed mechanism underlying the GEF specificity issue, we have analyzed a panel of chimeras made between Rac1 and Cdc42 and examined a series of point mutants of Rac1 made at the switch I, switch II, and beta(2)/beta(3) regions for their ability to interact with and to be activated by the GEFs. The results reveal that Rac1 residues of both the switch I and switch II regions are involved in GEF docking and GEF-mediated nucleotide disruption, because mutation of Asp(38), Asn(39), Gln(61), Tyr(64), or Arg(66)/Leu(67) into Ala results in the loss of GEF binding, whereas mutation at Tyr(32), Asp(65), or Leu(70)/Ser(71) leads to the loss of GEF catalysis while retaining the binding capability. The region between amino acids 53-72 of Rac1 is required for specific recognition and activation by the GEFs, and Trp(56) in beta(3) appears to be the critical determinant. Introduction of Trp(56) to Cdc42 renders it fully responsive to the Rac-specific GEF in vitro and in cells. Further, a polypeptide derived from the beta(3) region of Rac1 including the Trp(56) residue serves as a specific inhibitor for Rac1 interaction with the GEFs. Taken together, these results indicate that Trp(56) is the necessary and sufficient determinant of Rac1 for discrimination by the subset of Rac1-specific GEFs and suggest that a compound mimicking Trp(56) action could be explored as an interfering reagent specifically targeting Rac1 activation.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1074/jbc.m108865200

Cites

2 of 2 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • Previous studies demonstrated that DH domain GEFs distinguish between Rac and Cdc42 mainly via an aromatic residue at position 56.

    “For example, previous studies demonstrated that the DH domain GEFs distinguish between Rac and Cdc42 mainly via an aromatic residue at position 56 (47,48).”

    From Specific Recognition of Rac2 and Cdc42 by DOCK2 and DOCK9 Guanine Nucleotide Exchange Factors (2008) · cites this paper as [47]

    The Results section identifies Rac1 Trp56 as necessary and sufficient for discrimination from Cdc42 by the tested GEFs, TrioN, GEF-H1, and Tiam1. The Discussion cautions that this mechanism may not generalize to other GEFs, so the claim is too broad in referring to DH-domain GEFs generally. The source also specifies tryptophan, rather than an aromatic residue generically. (LLM, conf=0.88)

    Experimental — accuracy not yet measured
  • The reciprocal substitution in Cdc42 allows Cdc42-(F56W) to be specifically activated by Tiam1.

    “Conversely, the reciprocal substitution in Cdc42 allows Cdc42-(F56W) to be specifically activated by Tiam1 (47).”

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Flagged first, then by citations

Research works printed but not linked: 4

  1. Debant, A., Serra-Pages, C., Seipel, K., O'Brien, S., Tang, M., Park, S. H., and Streuli, M. (1996) Proc. Natl. Acad. Sci. U. S. A. 93, 5466 -5471
  2. O'Brien, S. P., Seipel, K., Medley, Q. G., Bronson, R., Segal, R., and Streuli, M. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 12074 -12078
  3. Chuang, T., Xu, X., Kaartinen, V., Heisterkamp, N., Groffen, J., and Bokoch, G. M. (1995) Proc. Natl. Acad. Sci. U. S. A. 92, 10282-10286
  4. Movilla, N., Dosil, M., Zheng, Y., and Bustelo, X. R. (2001) Oncogene, in press

Cited by

Sorted by citations

Authors
Gao, Y., Xing, J., Streuli, M., Leto, T. L., & Zheng, Y.
Affiliations
  • University of Tennessee Health Science Center (US)
  • Dana-Farber Cancer Institute (US)
  • National Institutes of Health (US)
Corresponding author
Zheng, Yi
Venue
Journal of Biological Chemistry
Publisher
Elsevier BV
Published
2001-12
Volume
276
Issue
50
Pages
47530-47541
ISSN
0021-9258 (ISSN-L)
OpenAlex
W2093334583
Cited by
115
References
2
Citations by year
2026: 4 · 2025: 1 · 2024: 10 · 2023: 1 · 2022: 3 · 2021: 7 · 2020: 4 · 2019: 8 · 2018: 3 · 2017: 5 · 2016: 3 · 2015: 4 · 2014: 6 · 2013: 6 · 2012: 4
FWCI
1.75
Type
journal article
Language
en
Open access
Locations
  • Journal of Biological Chemistry (publishedVersion, cc-by)
  • PubMed (publishedVersion)
Funders
  • National Institutes of Health
  • National Institute of General Medical Sciences (R01GM060523, R01GM053943, GM53943, GM-60523)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Kinase Regulation and GTPase Signaling
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular transport and secretion
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Receptor Mechanisms and Signaling
Keywords
Rac1, guanine nucleotide exchange factor, Cdc42, nucleotide exchange, switch I, switch II, trios, GEF-H1, Tiam1, Rho GTPase signaling
MeSH terms
T-Lymphoma Invasion and Metastasis-inducing Protein 1, Amino Acid Sequence, Amino Acids, Animals, Binding Sites, Cells, Cultured, Dose-Response Relationship, Drug, Glutathione Transferase, Histidine, Microscopy, Fluorescence, Models, Molecular, Molecular Sequence Data, Mutation, Peptides, Protein Binding, Proteins, Recombinant Fusion Proteins, Recombinant Proteins, Spectrometry, Fluorescence, Time Factors, Transfection, Tryptophan, Mutagenesis, Site-Directed, 3T3 Cells, Point Mutation, Sequence Homology, Amino Acid, DNA, Complementary, Guanine Nucleotide Exchange Factors, ras Guanine Nucleotide Exchange Factors, cdc42 GTP-Binding Protein, rac1 GTP-Binding Protein, Mice

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review