Trp56 of Rac1 Specifies Interaction with a Subset of Guanine Nucleotide Exchange Factors
Open accessAbstract
Signaling specificity of Rho GTPase pathways is achieved in part by selective interaction between members of the Dbl family guanine nucleotide exchange factors (GEFs) and their Rho GTPase substrates. For example, Trio, GEF-H1, and Tiam1 are a subset of GEFs that specifically activate Rac1 but not the closely related Cdc42. The Rac1 specificity of these GEFs appears to be governed by Rac1-GEF binding interaction. To understand the detailed mechanism underlying the GEF specificity issue, we have analyzed a panel of chimeras made between Rac1 and Cdc42 and examined a series of point mutants of Rac1 made at the switch I, switch II, and beta(2)/beta(3) regions for their ability to interact with and to be activated by the GEFs. The results reveal that Rac1 residues of both the switch I and switch II regions are involved in GEF docking and GEF-mediated nucleotide disruption, because mutation of Asp(38), Asn(39), Gln(61), Tyr(64), or Arg(66)/Leu(67) into Ala results in the loss of GEF binding, whereas mutation at Tyr(32), Asp(65), or Leu(70)/Ser(71) leads to the loss of GEF catalysis while retaining the binding capability. The region between amino acids 53-72 of Rac1 is required for specific recognition and activation by the GEFs, and Trp(56) in beta(3) appears to be the critical determinant. Introduction of Trp(56) to Cdc42 renders it fully responsive to the Rac-specific GEF in vitro and in cells. Further, a polypeptide derived from the beta(3) region of Rac1 including the Trp(56) residue serves as a specific inhibitor for Rac1 interaction with the GEFs. Taken together, these results indicate that Trp(56) is the necessary and sufficient determinant of Rac1 for discrimination by the subset of Rac1-specific GEFs and suggest that a compound mimicking Trp(56) action could be explored as an interfering reagent specifically targeting Rac1 activation.
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Previous studies demonstrated that DH domain GEFs distinguish between Rac and Cdc42 mainly via an aromatic residue at position 56.
“For example, previous studies demonstrated that the DH domain GEFs distinguish between Rac and Cdc42 mainly via an aromatic residue at position 56 (47,48).”
From Specific Recognition of Rac2 and Cdc42 by DOCK2 and DOCK9 Guanine Nucleotide Exchange Factors (2008) · cites this paper as [47]
The Results section identifies Rac1 Trp56 as necessary and sufficient for discrimination from Cdc42 by the tested GEFs, TrioN, GEF-H1, and Tiam1. The Discussion cautions that this mechanism may not generalize to other GEFs, so the claim is too broad in referring to DH-domain GEFs generally. The source also specifies tryptophan, rather than an aromatic residue generically. (LLM, conf=0.88)
Experimental — accuracy not yet measuredThe reciprocal substitution in Cdc42 allows Cdc42-(F56W) to be specifically activated by Tiam1.
“Conversely, the reciprocal substitution in Cdc42 allows Cdc42-(F56W) to be specifically activated by Tiam1 (47).”
From Specific Recognition of Rac2 and Cdc42 by DOCK2 and DOCK9 Guanine Nucleotide Exchange Factors (2008) · cites this paper as [47]
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Crystal structure of Rac1 in complex with the guanine nucleotide exchange region of Tiam1
Worthylake, D. K., Rossman, K. L., & Sondek, J. (2000) · Nature · doi:10.1038/35047014 · Cited by 355 · see citing works
Characterization of the Effector-specifying Domain of Rac Involved in NADPH Oxidase Activation
Kwong, C. H., Adams, A. G., & Leto, T. L. (1995) · Journal of Biological Chemistry · doi:10.1074/jbc.270.34.19868 · Cited by 76 · see citing works
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Specific Recognition of Rac2 and Cdc42 by DOCK2 and DOCK9 Guanine Nucleotide Exchange Factors
Kwofie, M. A., & Skowronski, J. (2008) · Journal of Biological Chemistry · doi:10.1074/jbc.m705170200 · Cited by 36 · see citing works
- Authors
- Gao, Y., Xing, J., Streuli, M., Leto, T. L., & Zheng, Y.
- Affiliations
- University of Tennessee Health Science Center (US)
- Dana-Farber Cancer Institute (US)
- National Institutes of Health (US)
- Corresponding author
- Zheng, Yi
- Venue
- Journal of Biological Chemistry
- Publisher
- Elsevier BV
- Published
- 2001-12
- Volume
- 276
- Issue
- 50
- Pages
- 47530-47541
- ISSN
- 0021-9258 (ISSN-L)
- OpenAlex
- W2093334583
- Cited by
- 115
- References
- 2
- Citations by year
- 2026: 4 · 2025: 1 · 2024: 10 · 2023: 1 · 2022: 3 · 2021: 7 · 2020: 4 · 2019: 8 · 2018: 3 · 2017: 5 · 2016: 3 · 2015: 4 · 2014: 6 · 2013: 6 · 2012: 4
- FWCI
- 1.75
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Journal of Biological Chemistry (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Funders
- National Institutes of Health
- National Institute of General Medical Sciences (R01GM060523, R01GM053943, GM53943, GM-60523)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Kinase Regulation and GTPase Signaling
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular transport and secretion
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Receptor Mechanisms and Signaling
- Keywords
- Rac1, guanine nucleotide exchange factor, Cdc42, nucleotide exchange, switch I, switch II, trios, GEF-H1, Tiam1, Rho GTPase signaling
- MeSH terms
- T-Lymphoma Invasion and Metastasis-inducing Protein 1, Amino Acid Sequence, Amino Acids, Animals, Binding Sites, Cells, Cultured, Dose-Response Relationship, Drug, Glutathione Transferase, Histidine, Microscopy, Fluorescence, Models, Molecular, Molecular Sequence Data, Mutation, Peptides, Protein Binding, Proteins, Recombinant Fusion Proteins, Recombinant Proteins, Spectrometry, Fluorescence, Time Factors, Transfection, Tryptophan, Mutagenesis, Site-Directed, 3T3 Cells, Point Mutation, Sequence Homology, Amino Acid, DNA, Complementary, Guanine Nucleotide Exchange Factors, ras Guanine Nucleotide Exchange Factors, cdc42 GTP-Binding Protein, rac1 GTP-Binding Protein, Mice
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