Distinctive Properties of the 5′-Untranslated Region of Human Hsp70 mRNA
Open accessAbstract
A relaxed cap-dependence of translation of the mRNA-encoding mammalian heat shock protein Hsp70 may suggest that its 5'-untranslated region (UTR) possesses an internal ribosome entry site (IRES). In this study, this possibility has been tested in transfected cells using plasmids that express dicistronic mRNAs. Using a reporter gene construct, Renilla luciferase/Photinus pyralis luciferase, we show that the 216-nt long 5'-UTR of Hsp70 mRNA acts as an IRES that directs ribosomes to the downstream start codon by a cap-independent mechanism. The relative activity of this IRES (100-fold over the empty vector) is similar to that of the classical picornaviral IRESs. Additional controls indicate that this high expression of the downstream reporter is not due to readthrough from the upstream cistron, nor is it due to translation of cryptic monocistronic transcripts. The effect of small deletions within the 5'-UTR of Hsp70 mRNA on the IRES activity varies in dependence on their position within the 5'-UTR sequence. With the exception of deletion of nt 33-50, it is small for the 5'-terminal half of the 5'-UTR and rather strong for the 3'-terminal section. However, neither of these small deletions abolishes the IRES activity completely. Excision of larger sections (>50 nt) by truncation of the 5'-UTR from the 5'-end or by internal deleting results in a dramatic impairment of the IRES function. Taken together, these data suggest that the IRES activity of the 5'-UTR of Hsp70 mRNA requires integrity of almost the entire sequence of the 5'-UTR. The data are discussed in terms of a model that allows a three-dimensional rather than linear mode of selection of the initiation region surrounding the start codon of Hsp70 mRNA.
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The Hsp70 5′ UTR has an enhancer element and can promote translation via both cap-dependent and cap-independent mechanisms.
“The higher expression of Hsp70 5′ UTR-mRNA in DC 2.4 may be attributed to an enhancer element in its sequence and to its capability to promote translation via both cap-dependent and cap-independent mechanisms.26,31”
From Evaluation of synthetic mRNA with selected UTR sequences and alternative poly(A) tail, in vitro and in vivo (2025) · cites this paper as [31]
The Discussion reports that the Hsp70 5′ UTR contains a strong IRES and directs cap-independent translation. It also notes an enhancing effect on reporter translation in monocistronic constructs. The paper does not establish that the UTR promotes translation through a cap-dependent mechanism as well, so the claim about both mechanisms is not fully supported. (LLM, conf=0.83)
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- Duncan, R. F. (1996) in Translational Control (Hershey, J. W. B., Mathews, B., and Sonenberg, N., eds), pp. 271-294, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
- Ausubel, R. M. (1987) Current Protocols in Molecular Biology, pp. 9.11-9.17, Willey-Interscience, New York
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Reshetnikov, V., Terenin, I., Shepelkova, G., Yeremeev, V., Kolmykov, S., Nagornykh, M., Kolosova, E., Sokolova, T., Zaborova, O., Kukushkin, I., et al. (2024) · International Journal of Molecular Sciences · doi:10.3390/ijms25020888 · Cited by 33 · see citing works
Medjmedj, A., Genon, H., Hezili, D., Loth, A. N., Clemençon, R., Guimpied, C., Mollet, L., Bigot, A., Wien, F., Hamacek, J., et al. (2025) · Molecular Therapy Nucleic Acids · doi:10.1016/j.omtn.2025.102648 · Cited by 19 · see citing works
- Authors
- Rubtsova, M. P., Sizova, D. V., Dmitriev, S. E., Ivanov, D. S., Prassolov, V. S., & Shatsky, I. N.
- Affiliations
- Lomonosov Moscow State University (RU)
- Engelhardt Institute of Molecular Biology (RU)
- Corresponding author
- Shatsky, Ivan N.
- Venue
- Journal of Biological Chemistry
- Publisher
- Elsevier BV
- Published
- 2003-06
- Volume
- 278
- Issue
- 25
- Pages
- 22350-22356
- ISSN
- 0021-9258 (ISSN-L)
- OpenAlex
- W2116058717
- Cited by
- 100
- References
- 0
- Citations by year
- 2026: 4 · 2025: 4 · 2024: 3 · 2023: 3 · 2022: 4 · 2021: 2 · 2020: 5 · 2019: 2 · 2018: 2 · 2017: 7 · 2016: 2 · 2015: 7 · 2014: 7 · 2013: 7 · 2012: 5
- FWCI
- 1.61
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Journal of Biological Chemistry (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Funders
- Russian Foundation for Basic Research
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA and protein synthesis mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Research and Splicing
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Heat shock proteins research
- Keywords
- HSP70 mRNA, 5' untranslated region, internal ribosome entry site, cap-independent translation, heat shock proteins, dicistronic mRNA, IRES activity, translation initiation, Renilla luciferase reporter
- MeSH terms
- Base Sequence, Codon, Genetic Vectors, Humans, Models, Molecular, Molecular Sequence Data, Nucleic Acid Conformation, Plasmids, RNA, Messenger, Transcription, Genetic, Protein Biosynthesis, Restriction Mapping, Polymerase Chain Reaction, Sequence Deletion, DNA Primers, HSP70 Heat-Shock Proteins, 5' Untranslated Regions
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