Cited by 66RNA Research and SplicingRNA regulation and diseaseAmyotrophic Lateral Sclerosis Research

Post-transcriptional Regulation of Neuro-oncological Ventral Antigen 1 by the Neuronal RNA-binding Proteins ELAV

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Ratti, Antonia, Fallini, Claudia, Colombrita, Claudia, Pascale, Alessia, Laforenza, Umberto, Quattrone, Alessandro, Silani, Vincenzo·2008·Journal of Biological Chemistry

Abstract

Alternative splicing of pre-mRNAs plays an important role in generating biological and functional diversity. Neuro-oncological ventral antigen 1 (Nova1) is a neuron-specific splicing factor that controls the alternative processing of a wide array of mRNAs important for synaptic activity. It is essential for the proper development of the mammalian motor system and for the survival of motoneurons. Because Nova1 gene contains putative regulatory AU-rich elements (ARE) in its highly conserved 3'-untranslated region, we investigated whether its expression is regulated by post-transcriptional mechanisms mediated by ARE-binding proteins. Among these, the neuronal ELAV (nELAV) factors are interesting candidates, because their RNA binding activity is necessary for neuronal differentiation and maintenance. By analysis of ribonucleoprotein complexes in vivo and in vitro we demonstrated that the Nova1 mRNA is a novel target of the nELAV proteins. We defined the nELAV binding site by functional experiments with luciferase reporter gene and Nova1 3'-untranslated region deletion sequences. Gene silencing and overexpression of the nELAV member HuD in motoneuronal NSC34 cells indicate that Nova1 mRNA stability and translation are positively and strongly controlled by the nELAV proteins. In addition, nELAV phosphorylation by a PKC-dependent pathway induces the recruitment of Nova1 mRNA to polysomes. Noteworthy, we found that nELAV proteins are also able to modulate Nova1 splicing activity on its target genes. Our data indicate nELAV proteins as the first factors affecting the expression and activity of the neuronal splicing regulator Nova1 and, consequently, as major candidates for the physiological modulation of Nova1-dependent processing of pre-mRNAs in neurons.

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  • HuD promotes the stability of AChE and Nova1 mRNAs in vitro and in vivo.

    “In addition to GAP-43 transcripts, HuD has also been shown to promote the stability of several other ARE-containing mRNAs in neurons, such as AChE (Deschenes-Furry et al. 2003) and Nova1 (Ratti et al. 2008), both in vitro and in vivo (Table 2; Perrone-Bizzozero and Bird 2013).”

    From Emerging complexity of the HuD/ELAVl4 gene; implications for neuronal development, function, and dysfunction (2013) · cites this paper as Ratti et al. 2008

    The Nova1 mRNA degradation results (page unavailable) show that HuD re-expression prolonged Nova1 mRNA half-life in cultured NSC34 cells, supporting the Nova1 stability claim in cells. The Experimental Procedures identify NSC34 as a cell line; this paper does not establish Nova1 mRNA stabilization in an organism. AChE is attributed to a different citation in the citing sentence and is not judged here. (LLM, conf=0.88)

    Experimental — accuracy not yet measured
  • NOVA1 is an interactor of ELAVL4, a gene that codes for a neuronal-specific RNA-binding protein and might have been under positive selection in humans.

    “NOVA1101, which is an interactor of ELAVL4102, a gene that codes for a neuronal-specific RNA-binding protein and might have been under positive selection in humans33,36.”

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References 49 · Cited by 66

Research works printed but not linked: 6

  1. Yang, Y. Y., Yin, G. L., and Darnell, R. B. (1998) Proc. Natl. Acad. Sci.
  2. Akamatsu, W., Fujihara, H., Mitsuhashi, T., Yano, M., Shibata, S., Hay- akawa, Y., Okano, H. J., Sakakibara, S., Takano, H., Takano, T., Takahashi, T., Noda, T., and Okano, H. (2005) Proc. Natl. Acad. Sci. U. S. A. 102, 4625-4630
  3. Quattrone, A., Pascale, A., Nogues, X., Zhao, W., Gusev, P., Pacini, A., and Alkon, D. L. (2001) Proc. Natl. Acad. Sci. U. S. A. 98, 11668 -11673
  4. Pascale, A., Gusev, P. A., Amadio, M., Dottorini, T., Govoni, S., Alkon, D. L., and Quattrone, A. (2004) Proc. Natl. Acad. Sci. U. S. A. 101, 1217-1222
  5. Pascale, A., Amadio, M., Scapagnini, G., Lanni, C., Racchi, M., Provenzani, A., Govoni, S., Alkon, D. L., and Quattrone, A. (2005) Proc. Natl. Acad. Sci.
  6. Polydorides, A. D., Okano, H. J., Yang, Y. Y., Stefani, G., and Darnell, R. B. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 6350 -6355

Authors
Ratti, A., Fallini, C., Colombrita, C., Pascale, A., Laforenza, U., Quattrone, A., & Silani, V.
Affiliations
  • University of Milan (IT)
  • University of Pavia (IT)
  • University of Trento (IT)
Corresponding author
Ratti, Antonia
Venue
Journal of Biological Chemistry
Publisher
Elsevier BV
Published
2008-03
Volume
283
Issue
12
Pages
7531-7541
ISSN
0021-9258 (ISSN-L)
OpenAlex
W2066972125
Cited by
66
References
49
Citations by year
2026: 1 · 2025: 2 · 2024: 3 · 2023: 1 · 2022: 1 · 2021: 1 · 2019: 4 · 2018: 3 · 2017: 7 · 2016: 4 · 2015: 7 · 2014: 6 · 2013: 8 · 2012: 7
FWCI
1.51
Type
journal article
Language
en
Open access
Locations
  • Journal of Biological Chemistry (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • Institutional Research Information System (Università degli Studi di Trento) (submittedVersion)
  • INFM-OAR (INFN Catania) (submittedVersion, cc-by)
Funders
  • Università degli Studi di Milano
  • National Science Council
  • Ministero della Salute
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Research and Splicing
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA regulation and disease
  • Health Sciences › Medicine › Neurology › Amyotrophic Lateral Sclerosis Research
Keywords
NOVA1, HUD, AU-rich elements, post-transcriptional regulation, alternative splicing, mRNA stability, translation (biology), 3' untranslated region, ribonucleoprotein complexes, PKC phosphorylation, motor neurons, NSC-34 cells
MeSH terms
ELAV-Like Protein 4, Neuro-Oncological Ventral Antigen, Animals, Antigens, Neoplasm, Cell Differentiation, Humans, Nerve Tissue Proteins, Neurons, Protein Biosynthesis, RNA-Binding Proteins, Alternative Splicing, 3' Untranslated Regions, RNA Stability, Multiprotein Complexes, Mice, ELAV Proteins

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