Autolysosomal degradation of cytosolic chromatin fragments antagonizes oxidative stress–induced senescence
Open accessAbstract
Oxidative stress-induced DNA damage, the senescence-associated secretory phenotype (SASP), and impaired autophagy all are general features of senescent cells. However, the cross-talk among these events and processes is not fully understood. Here, using NIH3T3 cells exposed to hydrogen peroxide stress, we show that stress-induced DNA damage provokes the SASP largely via cytosolic chromatin fragment (CCF) formation, which activates a cascade comprising cGMP-AMP synthase (cGAS), stimulator of interferon genes protein (STING), NF-κB, and SASP, and that autolysosomal function inhibits this cascade. We found that CCFs accumulate in senescent cells with activated cGAS-STING-NF-κB signaling, promoting SASP and cellular senescence. We also present evidence that the persistent accumulation of CCFs in prematurely senescent cells is partially associated with a defect in DNA-degrading activity in autolysosomes and reduced abundance of activated DNase 2α. Intriguingly, we found that metformin- or rapamycin-induced activation of autophagy significantly lessened the size and levels of CCFs and repressed the activation of the cGAS-STING-NF-κB-SASP cascade and cellular senescence. These effects of autophagy activators indicated that autolysosomal function contributes to CCF clearance and SASP suppression, further supported by the fact that the lysosome inhibitor bafilomycin A1 blocked the role of autophagy-mediated CCF clearance and senescence repression.
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CCFs clearance by autophagy represses senescence by preventing CCFs-induced cGAS/STING activation and SASP production.
“Accordingly, CCFs clearance by autophagy represses senescence by preventing CCFs-induced cGAS/STING activation and SASP production [249].”
From Mechanisms and Regulation of Cellular Senescence (2021) · cites this paper as [249]
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- Chen, Q., and Ames, B. N. (1994) Senescence-like growth arrest induced by hydrogen peroxide in human diploid fibroblast F65 cells. Proc. Natl. Acad. Sci. U.S.A. 91, 4130 -4134 CrossRef Medline · DOI · Paper page
- Toussaint, O., Medrano, E. E., and von Zglinicki, T. (2000) Cellular and molecular mechanisms of stress-induced premature senescence (SIPS) of human diploid fibroblasts and melanocytes. Exp. Gerontol. 35, 927-945 CrossRef Medline · DOI · Paper page
- Hernandez-Segura, A., Nehme, J., and Demaria, M. (2018) Hallmarks of cellular senescence. Trends Cell Biol. 28, 436 -453 CrossRef Medline · DOI · Paper page
- Freund, A., Laberge, R. M., Demaria, M., and Campisi, J. (2012) Lamin B1 loss is a senescence-associated biomarker. Mol. Biol. Cell 23, 2066 -2075 CrossRef Medline · DOI · Paper page
- Shah, P. P., Donahue, G., Otte, G. L., Capell, B. C., Nelson, D. M., Cao, K., Aggarwala, V., Cruickshanks, H. A., Rai, T. S., McBryan, T., Gregory, B. D., Adams, P. D., and Berger, S. L. (2013) Lamin B1 depletion in senescent cells triggers large-scale changes in gene expression and the chromatin landscape. Genes Dev. 27, 1787-1799 CrossRef Medline · DOI · Paper page
- Ablasser, A., Goldeck, M., Cavlar, T., Deimling, T., Witte, G., Röhl, I., Hopfner, K.-P., Ludwig, J., and Hornung, V. (2013) cGAS produces a 2Ј- 5Ј-linked cyclic dinucleotide second messenger that activates STING. Na- ture 498, 380 -384 CrossRef Medline · DOI · Paper page
- Sun, L., Wu, J., Du, F., Chen, X., and Chen, Z. J. (2013) Cyclic GMP-AMP synthase is a cytosolic DNA sensor that activates the type I interferon pathway. Science 339, 786 -791 CrossRef Medline · DOI · Paper page
- Wu, J., Sun, L., Chen, X., Du, F., Shi, H., Chen, C., and Chen, Z. J. (2013) Cyclic GMP-AMP is an endogenous second messenger in innate immune signaling by cytosolic DNA. Science 339, 826 -830 CrossRef Medline · DOI
- Li, T., and Chen, Z. J. (2018) The cGAS-cGAMP-STING pathway con- nects DNA damage to inflammation, senescence, and cancer. J. Exp. Med. 215, 1287-1299 CrossRef Medline · DOI · Paper page
- Yang, H., Wang, H., Ren, J., Chen, Q., and Chen, Z. J. (2017) cGAS is essential for cellular senescence. Proc. Natl. Acad. Sci. U.S.A. 114, E4612-E4620 CrossRef Medline · DOI · Paper page
- Coppe ´, J. P., Desprez, P. Y., Krtolica, A., and Campisi, J. (2010) The senes- cence-associated secretory phenotype: the dark side of tumor suppres- sion. Annu. Rev. Pathol. 5, 99 -118 CrossRef Medline · DOI · Paper page
- Kang, C., Xu, Q., Martin, T. D., Li, M. Z., Demaria, M., Aron, L., Lu, T., Yankner, B. A., Campisi, J., and Elledge, S. J. (2015) The DNA damage response induces inflammation and senescence by inhibiting autophagy of GATA4. Science 349, aaa5612 CrossRef Medline · DOI · Paper page
- Salminen, A., Kauppinen, A., and Kaarniranta, K. (2012) Emerging role of NF-B signaling in the induction of senescence-associated secretory phe- notype (SASP). Cell. Signal. 24, 835-845 CrossRef Medline · DOI · Paper page
- Chien, Y., Scuoppo, C., Wang, X., Fang, X., Balgley, B., Bolden, J. E., Prem- srirut, P., Luo, W., Chicas, A., Lee, C. S., Kogan, S. C., and Lowe, S. W. (2011) Control of the senescence-associated secretory phenotype by NF-B promotes senescence and enhances chemosensitivity. Genes Dev. 25, 2125-2136 CrossRef Medline · DOI · Paper page
- Dou, Z., Xu, C., Donahue, G., Shimi, T., Pan, J. A., Zhu, J., Ivanov, A., Capell, B. C., Drake, A. M., Shah, P. P., Catanzaro, J. M., Ricketts, M. D., Lamark, T., Adam, S. A., Marmorstein, R., et al. (2015) Autophagy medi- ates degradation of nuclear lamina. Nature 527, 105-109 CrossRef Medline · DOI · Paper page
- Ivanov, A., Pawlikowski, J., Manoharan, I., van Tuyn, J., Nelson, D. M., Rai, T. S., Shah, P. P., Hewitt, G., Korolchuk, V. I., Passos, J. F., Wu, H., Berger, S. L., and Adams, P. D. (2013) Lysosome-mediated processing of chroma- tin in senescence. J. Cell Biol. 202, 129 -143 CrossRef Medline · DOI · Paper page
- Park, Y. E., Hayashi, Y. K., Bonne, G., Arimura, T., Noguchi, S., Nonaka, I., and Nishino, I. (2009) Autophagic degradation of nuclear components in mammalian cells. Autophagy 5, 795-804 CrossRef Medline · DOI
- Evans, C. J., and Aguilera, R. J. (2003) DNase II: genes, enzymes and func- tion. Gene 322, 1-15 CrossRef Medline · DOI
- Kawane, K., Fukuyama, H., Kondoh, G., Takeda, J., Ohsawa, Y., Uchiyama, Y., and Nagata, S. (2001) Requirement of DNase II for de- finitive erythropoiesis in the mouse fetal liver. Science 292, 1546 -1549 CrossRef Medline · DOI
- Kawane, K., Ohtani, M., Miwa, K., Kizawa, T., Kanbara, Y., Yoshioka, Y., Yoshikawa, H., and Nagata, S. (2006) Chronic polyarthritis caused by mammalian DNA that escapes from degradation in macrophages. Nature 443, 998 -1002 CrossRef Medline · DOI
- Yoshida, H., Okabe, Y., Kawane, K., Fukuyama, H., and Nagata, S. (2005) Lethal anemia caused by interferon- produced in mouse embryos carry- ing undigested DNA. Nat. Immunol. 6, 49 -56 CrossRef Medline · DOI
- Han, X., Tai, H., Wang, X., Wang, Z., Zhou, J., Wei, X., Ding, Y., Gong, H., Mo, C., Zhang, J., Qin, J., Ma, Y., Huang, N., Xiang, R., and Xiao, H. (2016) AMPK activation protects cells from oxidative stress-induced senescence via autophagic flux restoration and intracellular NAD ϩ elevation. Aging Cell 15, 416 -427 CrossRef Medline · DOI · Paper page
- Fujiwara, Y., Kikuchi, H., Aizawa, S., Furuta, A., Hatanaka, Y., Konya, C., Uchida, K., Wada, K., and Kabuta, T. (2013) Direct uptake and degradation of DNA by lysosomes. Autophagy 9, 1167-1171 CrossRef Medline · DOI
- Ohkouchi, S., Shibata, M., Sasaki, M., Koike, M., Safig, P., Peters, C., Na- gata, S., and Uchiyama, Y. (2013) Biogenesis and proteolytic processing of lysosomal DNase II. PLoS ONE 8, e59148 CrossRef Medline · DOI
- Freund, A., Orjalo, A. V., Desprez, P. Y., and Campisi, J. (2010) Inflamma- tory networks during cellular senescence: causes and consequences. Trends Mol. Med. 16, 238 -246 CrossRef Medline · DOI · Paper page
- Authors
- Han, X., Chen, H., Gong, H., Tang, X., Huang, N., Xu, W., Tai, H., Zhang, G., Zhao, T., Gong, C., Wang, S., Yang, Y., & Xiao, H.
- Affiliations
- Sichuan University (CN)
- Chengdu Medical College (CN)
- Corresponding author
- Xiao, Hengyi
- ORCID
- Venue
- Journal of Biological Chemistry
- Publisher
- Elsevier BV
- Published
- 2020-04
- Volume
- 295
- Issue
- 14
- Pages
- 4451-4463
- ISSN
- 0021-9258 (ISSN-L)
- PMC
- PMC7135980
- OpenAlex
- W3005858280
- Cited by
- 80
- References
- 38
- Citations by year
- 2026: 16 · 2025: 11 · 2024: 15 · 2023: 6 · 2022: 16 · 2021: 7 · 2020: 9
- FWCI
- 5.72
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Journal of Biological Chemistry (publishedVersion, cc-by)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Natural Science Foundation of China (81771511)
- National Key R&D Program of China (2018YFC2000400)
- National Clinical Research Center for Geriatrics, West China Hospital, Sichuan University (Z2018B04)
- Topics
- Health Sciences › Medicine › Physiology › Telomeres, Telomerase, and Senescence
- Health Sciences › Medicine › Epidemiology › Autophagy in Disease and Therapy
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Aging › Genetics, Aging, and Longevity in Model Organisms
- Keywords
- cellular senescence, senescence-associated secretory phenotype, autolysosomes, autophagy, oxidative stress, DNA damage, hydrogen peroxide, metformin, rapamycin, bafilomycin A1, lysosomes
- MeSH terms
- STING Protein, Cyclic Guanosine Monophosphate-Adenosine Monophosphate Synthase, Animals, Autophagy, Chromatin, DNA Damage, Endodeoxyribonucleases, Cyclic GMP, Hydrogen Peroxide, Lysosomes, Membrane Proteins, Nucleotidyltransferases, Signal Transduction, Interleukin-6, NF-kappa B, Cellular Senescence, Oxidative Stress, RNA Interference, RNA, Small Interfering, NIH 3T3 Cells, Cyclin-Dependent Kinase Inhibitor p21, Mice
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