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Identification of Lysine Succinylation Substrates and the Succinylation Regulatory Enzyme CobB in Escherichia coli

Open access
Colak, Gozde, Xie, Zhongyu, Zhu, Anita Y., Dai, Lunzhi, Lu, Zhike, Zhang, Yi, Wan, Xuelian, Chen, Yue, Cha, Yoon H., Lin, Hening, Zhao, Yingming, Tan, Minjia·2013·Molecular & Cellular Proteomics

Abstract

Lysine succinylation is a newly identified protein post-translational modification pathway present in both prokaryotic and eukaryotic cells. However, succinylation substrates and regulatory enzyme(s) remain largely unknown, hindering the biological study of this modification. Here we report the identification of 2,580 bacterial lysine succinylation sites in 670 proteins and 2,803 lysine acetylation (Kac) sites in 782 proteins, representing the first lysine succinylation dataset and the largest Kac dataset in wild-type E. coli. We quantified dynamic changes of the lysine succinylation and Kac substrates in response to high glucose. Our data showed that high-glucose conditions led to more lysine-succinylated proteins and enhanced the abundance of succinyllysine peptides more significantly than Kac peptides, suggesting that glucose has a more profound effect on succinylation than on acetylation. We further identified CobB, a known Sir2-like bacterial lysine deacetylase, as the first prokaryotic desuccinylation enzyme. The identification of bacterial CobB as a bifunctional enzyme with lysine desuccinylation and deacetylation activities suggests that the eukaryotic Kac-regulatory enzymes may have enzymatic activities on various lysine acylations with very different structures. In addition, it is highly likely that lysine succinylation could have unique and more profound regulatory roles in cellular metabolism relative to lysine acetylation under some physiological conditions.

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Metadata

Authors
Colak, G., Xie, Z., Zhu, A. Y., Dai, L., Lu, Z., Zhang, Y., Wan, X., Chen, Y., Cha, Y. H., Lin, H., Zhao, Y., & Tan, M.
Venue
Molecular & Cellular Proteomics
Publisher
Elsevier BV
Published
2013-12
Volume
12
Issue
12
Pages
3509-3520
ISSN
1535-9476 (ISSN-L)
OpenAlex
W2145745183
Cited by
278
References
14
FWCI
8.00
Type
journal article
Language
en
Open access
hybrid

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CoChat. (2026). Citation check: Identification of Lysine Succinylation Substrates and the Succinylation Regulatory Enzyme CobB in Escherichia coli. https://app.cochat.ai/papers/10.1074/mcp.m113.031567
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Colak, G., Xie, Z., Zhu, A. Y., Dai, L., Lu, Z., Zhang, Y., Wan, X., Chen, Y., Cha, Y. H., Lin, H., Zhao, Y., & Tan, M. (2013). Identification of Lysine Succinylation Substrates and the Succinylation Regulatory Enzyme CobB in Escherichia coli. Molecular & Cellular Proteomics. https://doi.org/10.1074/mcp.m113.031567

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