The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.
Principal Curves
Abstract
Principal curves are smooth one-dimensional curves that pass through the middle of a p-dimensional data set, providing a nonlinear summary of the data. They are nonparametric, and their shape is suggested by the data. The algorithm for constructing principal curves starts with some prior summary, such as the usual principal-component line. The curve in each successive iteration is a smooth or local average of the p-dimensional points, where the definition of local is based on the distance in arc length of the projections of the points onto the curve found in the previous iteration. In this article principal curves are defined, an algorithm for their construction is given, some theoretical results are presented, and the procedure is compared to other generalizations of principal components. Two applications illustrate the use of principal curves. The first describes how the principal-curve procedure was used to align the magnets of the Stanford linear collider. The collider uses about 950 magnets in a roughly circular arrangement to bend electron and positron beams and bring them to collision. After construction, it was found that some of the magnets had ended up significantly out of place. As a result, the beams had to be bent too sharply and could not be focused. The engineers realized that the magnets did not have to be moved to their originally planned locations, but rather to a sufficiently smooth arc through the middle of the existing positions. This arc was found using the principal-curve procedure. In the second application, two different assays for gold content in several samples of computer-chip waste appear to show some systematic differences that are blurred by measurement error. The classical approach using linear errors in variables regression can detect systematic linear differences but is not able to account for nonlinearities. When the first linear principal component is replaced with a principal curve, a local “bump” is revealed, and bootstrapping is used to verify its presence.
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Citations
Cites
Some aspects of the spline smoothing approach to non-parametric regression curve fitting
Silverman, B. W. (1985) · Journal of the Royal Statistical Society Series B: Statistical Methodology · doi:10.1111/j.2517-6161.1985.tb01327.x · Cited by 1,117
Cited by
Nonlinear Dimensionality Reduction by Locally Linear Embedding
Roweis, S. T., & Saul, L. K. (2000) · Science · doi:10.1126/science.290.5500.2323 · Cited by 14,965
A Global Geometric Framework for Nonlinear Dimensionality Reduction
Tenenbaum, J. B., Silva, V. D., & Langford, J. C. (2000) · Science · doi:10.1126/science.290.5500.2319 · Cited by 13,585
Integrating single-cell transcriptomic data across different conditions, technologies, and species
Butler, A., Hoffman, P., Smibert, P., Papalexi, E., & Satija, R. (2018) · Nature Biotechnology · doi:10.1038/nbt.4096 · Cited by 13,174
Reversed graph embedding resolves complex single-cell trajectories
Qiu, X., Mao, Q., Tang, Y., Wang, L., Chawla, R., Pliner, H. A., & Trapnell, C. (2017) · Nature Methods · doi:10.1038/nmeth.4402 · Cited by 5,070
Slingshot: cell lineage and pseudotime inference for single-cell transcriptomics
Street, K., Risso, D., Fletcher, R. B., Das, D., Ngai, J., Yosef, N., Purdom, E., & Dudoit, S. (2018) · BMC Genomics · doi:10.1186/s12864-018-4772-0 · Cited by 3,159
Metadata
- Authors
- Hastie, T., & Stuetzle, W.
- Venue
- Journal of the American Statistical Association
- Publisher
- Informa UK Limited
- Published
- 1989-06
- Volume
- 84
- Issue
- 406
- Pages
- 502-516
- ISSN
- 0162-1459 (ISSN-L)
- 1537-274X
- OpenAlex
- W4251002338
- Cited by
- 1,249
- References
- 1
- FWCI
- 5.51
- Type
- journal article
- Language
- en
- Open access
- closed
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