The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.
AtomEye: an efficient atomistic configuration viewer
Open accessAbstract
AtomEye is free atomistic visualization software for all major UNIX platforms. It is based on a newly developed graphics core library of higher quality than the X-window standard, with area-weighted anti-aliasing. An order- N neighbourlist algorithm is used to compute the bond connectivity. The functionalities of AtomEye include: parallel and perspective projections with full three-dimensional navigation; customizable bond and coordination number calculation; colour-encoding of arbitrary user-defined quantities; local atomic strain invariant; coloured atom tiling and tracing; up to 16 cutting planes; periodic boundary condition translations; high-quality JPEG, PNG and EPS screenshots; and animation scripting. The program is efficient compared to OpenGL hardware acceleration by employing special algorithms to treat spheres (atoms) and cylinders (bonds), in which they are rendered as primitive objects rather than as composites of polygons. AtomEye can handle more than one million atoms on a PC with 1 GB memory. It is a robust, low-cost tool for surveying nanostructures and following their evolutions.
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Cites
VMD: visual molecular dynamics
Humphrey, W., Dalke, A., & Schulten, K. (1996) · Journal of Molecular Graphics · doi:10.1016/0263-7855(96)00018-5 · Cited by 66,952
The Protein Data Bank: unifying the archive
Westbrook, J. (2002) · Nucleic Acids Research · doi:10.1093/nar/30.1.245 · Cited by 309
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On representing chemical environments
Bartók, A. P., Kondor, R., & Csányi, G. (2013) · Physical Review B · doi:10.1103/physrevb.87.184115 · Cited by 2,572
Atomsk: A tool for manipulating and converting atomic data files
Hirel, P. (2015) · Computer Physics Communications · doi:10.1016/j.cpc.2015.07.012 · Cited by 2,336
Biomechanics and biophysics of cancer cells☆
SURESH, S. (2007) · Acta Biomaterialia · doi:10.1016/j.actbio.2007.04.002 · Cited by 1,284
The evolving quality of frictional contact with graphene
Li, S., Li, Q., Carpick, R. W., Gumbsch, P., Liu, X. Z., Ding, X., Sun, J., & Li, J. (2016) · Nature · doi:10.1038/nature20135 · Cited by 541
Self-citationSuper-elastic ferroelectric single-crystal membrane with continuous electric dipole rotation
Dong, G., Li, S., Yao, M., Zhou, Z., Zhang, Y.-Q., Han, X., Luo, Z., Yao, J., Peng, B., Hu, Z., et al. (2019) · Science · doi:10.1126/science.aay7221 · Cited by 475
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Metadata
- Authors
- Li, J.
- Venue
- Modelling and Simulation in Materials Science and Engineering
- Publisher
- IOP Publishing
- Published
- 2003-01-30
- Volume
- 11
- Issue
- 2
- Pages
- 173-177
- ISSN
- 0965-0393 (ISSN-L)
- OpenAlex
- W2135827618
- Cited by
- 1,157
- References
- 2
- FWCI
- 29.39
- Type
- journal article
- Language
- en
- Open access
- bronze
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
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