The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.
Structure Comparison and Structure Patterns
Abstract
This article investigates aspects of pairwise and multiple structure comparison, and the problem of automatically discover common patterns in a set of structures. Descriptions and representation of structures and patterns are described, as well as scoring and algorithms for comparison and discovery. A framework and nomenclature is developed for classifying different methods, and many of these are reviewed and placed into this framework.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Needleman, S. B., & Wunsch, C. D. (1970) · Journal of Molecular Biology · doi:10.1016/0022-2836(70)90057-4 · Cited by 11,288
Protein Structure Comparison by Alignment of Distance Matrices
Holm, L., & Sander, C. (1993) · Journal of Molecular Biology · doi:10.1006/jmbi.1993.1489 · Cited by 3,984
Cited by
MUSCLE: multiple sequence alignment with high accuracy and high throughput
Edgar, R. C. (2004) · Nucleic Acids Research · doi:10.1093/nar/gkh340 · Cited by 44,662
Flexible structure alignment by chaining aligned fragment pairs allowing twists
Ye, Y., & Godzik, A. (2003) · Bioinformatics · doi:10.1093/bioinformatics/btg1086 · Cited by 616
Extracellular adenosine deamination primes tip organizer development in Dictyostelium
Hathi, P., & Ramamurthy, B. (2025) · eLife · doi:10.7554/elife.104855 · Cited by 1
Extracellular adenosine deamination primes tip organizer development in Dictyostelium
(2024) · doi:10.1101/2024.12.09.627566 · Cited by 1
Metadata
- Authors
- Eidhammer, I., Jonassen, I., & Taylor, W. R.
- Venue
- Journal of Computational Biology
- Publisher
- SAGE Publications
- Published
- 2000-10
- Volume
- 7
- Issue
- 5
- Pages
- 685-716
- ISSN
- 1066-5277 (ISSN-L)
- 1557-8666
- OpenAlex
- W1966521833
- Cited by
- 212
- References
- 2
- FWCI
- 3.27
- Type
- journal article
- Language
- en
- Open access
- closed
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: Structure Comparison and Structure Patterns. https://app.cochat.ai/papers/10.1089/106652701446152
- The paper
- Eidhammer, I., Jonassen, I., & Taylor, W. R. (2000). Structure Comparison and Structure Patterns. Journal of Computational Biology. https://doi.org/10.1089/106652701446152
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
