Calculating Sample Size Estimates for RNA Sequencing Data

Cited by (346)

Items 301–346 of 346

1. Peer Review #2 of "RNA sequencing-based exploration of the effects of far-red light on microRNAs involved in the shade-avoidance response of D. officinale (v0.1)"
   2023 · PeerJ
2. Peer Review #1 of "RNA sequencing-based exploration of the effects of far-red light on microRNAs involved in the shade-avoidance response of D. officinale (v0.1)"
   2023 · PeerJ
3. Peer Review #3 of "RNA sequencing-based exploration of the effects of far-red light on microRNAs involved in the shade-avoidance response of D. officinale (v0.2)"
   2023 · PeerJ
4. Peer Review #1 of "RNA sequencing-based exploration of the effects of far-red light on microRNAs involved in the shade-avoidance response of D. officinale (v0.2)"
   2023 · PeerJ
5. Peer Review #3 of "RNA sequencing-based exploration of the effects of far-red light on microRNAs involved in the shade-avoidance response of D. officinale (v0.1)"
   2023 · PeerJ
6. Immune and metabolic markers for identifying and investigating severe Coronavirus disease and Sepsis in children and young people (pSeP/COVID ChYP study): protocol for a prospective cohort study
   Sivakumar Oruganti, Patricia Dos Santos Rodrigues, Daniel Allan White, William John Watkins, Selyf Shapey, Anna Barrow, Rim Al Samsam, Sara Ali, Malcolm Gajraj, Richard Skone et al. · 2023 · BMJ Open
7. Peer Review #3 of "SARS-CoV-2 ORF3A interacts with the Clic-like chloride channel-1 (CLCC1) and triggers an unfolded protein response (v0.1)"
   2023 · PeerJ
8. Peer Review #1 of "SARS-CoV-2 ORF3A interacts with the Clic-like chloride channel-1 (CLCC1) and triggers an unfolded protein response (v0.1)"
   2023 · PeerJ
9. Peer Review #3 of "SARS-CoV-2 ORF3A interacts with the Clic-like chloride channel-1 (CLCC1) and triggers an unfolded protein response (v0.2)"
   2023 · PeerJ
10. Peer Review #2 of "SARS-CoV-2 ORF3A interacts with the Clic-like chloride channel-1 (CLCC1) and triggers an unfolded protein response (v0.1)"
    2023 · PeerJ
11. Peer Review #2 of "SARS-CoV-2 ORF3A interacts with the Clic-like chloride channel-1 (CLCC1) and triggers an unfolded protein response (v0.2)"
    2023 · PeerJ
12. Exclusive heat-not-burn cigarette smoking alters the profile of circulating microRNAs
    Vittorio Picchio, Giulio Ferrero, Claudia Cozzolino, Barbara Pardini, Erica Floris, Sonia Tarallo, Xhulio Dhori, Cristina Nocella, Lorenzo Loffredo, Giuseppe Biondi‐Zoccai et al. · 2023 · medRxiv
13. Additional file 2 of Does intervention with GLP-1 receptor agonist semaglutide modulate perception of sweet taste in women with obesity: study protocol of a randomized, single-blinded, placebo-controlled clinical trial
    Mojca Jensterle, Simona Ferjan, Battelino, Tadej, Kovač, Jernej, Saba Battelino, Dušan Šuput, Vovk, Andrej, Janež, Andrej · 2021 · Figshare
14. Additional file 1 of Integrated transcriptomics and histopathology approach identifies a subset of rejected donor livers with potential suitability for transplantation
    Ankita Srivastava, Manchel, Alexandra, Waters, John, Manju Ambelil, Benjamin Barnhart, Hoek, Jan B., Ashesh P. Shah, Rajanikanth Vadigepalli · 2024 · Figshare
15. Additional file 1 of Distinct genome-wide DNA methylation and gene expression signatures in classical monocytes from African American patients with systemic sclerosis
    Peter C. Allen, Smith, Sarah, Robert C. Wilson, Jena R. Wirth, Nathan H. Wilson, DeAnna Baker Frost, Jonathan Flume, Gary S. Gilkeson, Melissa A. Cunningham, Carl D. Langefeld et al. · 2024 · Figshare
16. Additional file 3 of Integrated transcriptomics and histopathology approach identifies a subset of rejected donor livers with potential suitability for transplantation
    Ankita Srivastava, Manchel, Alexandra, Waters, John, Manju Ambelil, Benjamin Barnhart, Hoek, Jan B., Ashesh P. Shah, Rajanikanth Vadigepalli · 2024 · Figshare
17. Additional file 1 of HCV eradication with IFN-based therapy does not completely restore gene expression in PBMCs from HIV/HCV-coinfected patients
    Brochado, Óscar, Isidoro Martínez, Juan Berenguer, Luz María Medrano, Juan González‐García, Maria Jiménez-Sousa, Ana Carrero, Hontañón, Víctor, Jordi Navarro, Josep M. Guardiola et al. · 2021 · Figshare
18. Additional file 5 of Integrated transcriptomics and histopathology approach identifies a subset of rejected donor livers with potential suitability for transplantation
    Ankita Srivastava, Manchel, Alexandra, Waters, John, Manju Ambelil, Benjamin Barnhart, Hoek, Jan B., Ashesh P. Shah, Rajanikanth Vadigepalli · 2024 · Figshare
19. Additional file 4 of Integrated transcriptomics and histopathology approach identifies a subset of rejected donor livers with potential suitability for transplantation
    Ankita Srivastava, Manchel, Alexandra, Waters, John, Manju Ambelil, Benjamin Barnhart, Hoek, Jan B., Ashesh P. Shah, Rajanikanth Vadigepalli · 2024 · Figshare
20. Additional file 2 of Integrated transcriptomics and histopathology approach identifies a subset of rejected donor livers with potential suitability for transplantation
    Ankita Srivastava, Manchel, Alexandra, Waters, John, Manju Ambelil, Benjamin Barnhart, Hoek, Jan B., Ashesh P. Shah, Rajanikanth Vadigepalli · 2024 · Figshare
21. Additional file 1 of Does intervention with GLP-1 receptor agonist semaglutide modulate perception of sweet taste in women with obesity: study protocol of a randomized, single-blinded, placebo-controlled clinical trial
    Mojca Jensterle, Simona Ferjan, Battelino, Tadej, Kovač, Jernej, Saba Battelino, Dušan Šuput, Vovk, Andrej, Janež, Andrej · 2021 · Figshare
22. Additional file 4 of HCV eradication with IFN-based therapy does not completely restore gene expression in PBMCs from HIV/HCV-coinfected patients
    Brochado, Óscar, Isidoro Martínez, Juan Berenguer, Luz María Medrano, Juan González‐García, Maria Jiménez-Sousa, Ana Carrero, Hontañón, Víctor, Jordi Navarro, Josep M. Guardiola et al. · 2021 · Figshare
23. Additional file 5 of HCV eradication with IFN-based therapy does not completely restore gene expression in PBMCs from HIV/HCV-coinfected patients
    Brochado, Óscar, Isidoro Martínez, Juan Berenguer, Luz María Medrano, Juan González‐García, Maria Jiménez-Sousa, Ana Carrero, Hontañón, Víctor, Jordi Navarro, Josep M. Guardiola et al. · 2021 · Figshare
24. Additional file 7 of HCV eradication with IFN-based therapy does not completely restore gene expression in PBMCs from HIV/HCV-coinfected patients
    Brochado, Óscar, Isidoro Martínez, Juan Berenguer, Luz María Medrano, Juan González‐García, Maria Jiménez-Sousa, Ana Carrero, Hontañón, Víctor, Jordi Navarro, Josep M. Guardiola et al. · 2021 · Figshare
25. Additional file 1 of RnaSeqSampleSize: real data based sample size estimation for RNA sequencing
    Zhao, Shilin, Li, Chung-I, Guo, Yan, Quanhu Sheng, Shyr, Yu · 2018 · Figshare
26. Additional file 2 of HCV eradication with IFN-based therapy does not completely restore gene expression in PBMCs from HIV/HCV-coinfected patients
    Brochado, Óscar, Isidoro Martínez, Juan Berenguer, Luz María Medrano, Juan González‐García, Maria Jiménez-Sousa, Ana Carrero, Hontañón, Víctor, Jordi Navarro, Josep M. Guardiola et al. · 2021 · Figshare
27. Additional file 3 of HCV eradication with IFN-based therapy does not completely restore gene expression in PBMCs from HIV/HCV-coinfected patients
    Brochado, Óscar, Isidoro Martínez, Juan Berenguer, Luz María Medrano, Juan González‐García, Maria Jiménez-Sousa, Ana Carrero, Hontañón, Víctor, Jordi Navarro, Josep M. Guardiola et al. · 2021 · Figshare
28. Additional file 6 of HCV eradication with IFN-based therapy does not completely restore gene expression in PBMCs from HIV/HCV-coinfected patients
    Brochado, Óscar, Isidoro Martínez, Juan Berenguer, Luz María Medrano, Juan González‐García, Maria Jiménez-Sousa, Ana Carrero, Hontañón, Víctor, Jordi Navarro, Josep M. Guardiola et al. · 2021 · Figshare
29. Dibutyryl Cyclic AMP Attenuates Cerebral Ischemia-reperfusion Injury by Inhibiting Cuproptosis: A Preliminary Study
    Longjie Cai, Zefeng Meng, Tianyang Wu, Yesen Zhang, Shuhua Li, Xialin Zheng, Zhiquan Jiang · 2025 · Current Neurovascular Research
30. Transcriptomic profiling of a commensal Escherichia coli lysogen in simulated intestinal fluid reveals broad changes in both core and accessory regions of the genome
    Kat Pick, Tracy L. Raivio · 2026 · BMC Genomics
31. Propriétés immunes de la cellule endothéliale au cours du sepsis
    Stéphanie Pons · 2021 · theses.fr (ABES)
32. Peripheral leukocyte transcriptomic changes in preweaned Holstein heifer calves with varying stages of Bovine Respiratory Disease
    Lindsey C. Makratzakis, Joel A. Velasco, Neils C. Stegelmeier, Stephen Patrick Ficklin, Holly R. Hinnant, Lily A. Elder, Chris M. Mandella, Rachel A. Leeson, Carolyn D. Fisher, Giovana Simão Slanzon et al. · 2026 · PLoS ONE
33. Arterial Tissue Gene Expression Associated With Telomere Length Attrition in Coronary Artery Disease
    Zhi Chng Lau, Arshia Naaz, Umamaheswari Muniasamy, Xuxin Lim, Resham L Gurung, Gokce Oguz, Adaikalavan Ramasamy, Koh Wp, Vitaly A. Sorokin, Rajkumar Dorajoo · 2026 · Journal of Lipid and Atherosclerosis
34. Mononuclear myeloid cells mount an adaptive protective response to intracerebral haemorrhage by activation of NRF2
    James JM Loan, Jing Qiu, Jack Barrington, Paul S. Baxter, Sean McKay, Caoimhe Kirby, Xin He, Christine Lerpiniere, Karina McDade, Meryam Beniazza et al. · 2026 · bioRxiv (Cold Spring Harbor Laboratory)
35. Study protocol: analysis of gene expression profiles in peripheral blood and tumor tissue of Colombian patients diagnosed with epithelial ovarian cancer
    Elizabeth Vargas, William Torres, Julián C. Riaño-Moreno · 2026 · Frontiers in Oncology
36. Seasonal changes in the transcriptome of bat eyes reveal adaptive changes to exploit summer twilight
    Cara Webster, Michael S. Smotherman · 2026 · Physiological Genomics
37. Extremes on the benign-malignant tumour spectrum: Distinct transcriptomic landscapes between two common canine perianal neoplasms based on the hallmarks of cancer
    Alexander F. H. Haake, Alina K. Loriani Fard, Vladimir M Jovanovic, Michael Hummel, Sandro Andreotti, Achim Dieter Gruber · 2026 · PLoS ONE
38. A placental transcriptional signature for autism
    Luba Sominsky, Anne‐Louise Ponsonby, Martin O’Hely, Richard Saffery, Christos Symeonides, Poshmaal Dhar, David Burgner, Peter David Sly, Fiona Collier, Samuel Tanner et al. · 2026 · medRxiv
39. Normal spermatogenesis in older men is associated with compensatory transcriptome changes
    Yihan Wang, Sven Berres, Henrike Krenz, Tobias Tekath, Marius Wöste, Sarah Sandmann, Amelie Körtje, Anna Henrich, Nicole Terwort, Frank Tüttelmann et al. · 2026 · GeroScience
40. Skeletal muscle reprogramming of metabolic, ribosomal and developmental pathways contributes to Roux-en-Y gastric bypass-induced adaptation in women
    Chantal A. Pileggi, Dhanuddara Mohottalage, Luke S. Kennedy, Majid Nikpay, Lauren M.K. Hamilton, Martín Roffé, Michel N Kanaan, Amer Jarrar, Nicole Kolozsvari, Dongdong Wang et al. · 2026 · EBioMedicine
41. Differential Expression of MicroRNAs in the Mammary Gland of Lactating and Dry Murciano-Granadina Goats
    Mingjing Wang, Tainã Figueiredo Cardoso, Antonia Noce, Endika Varela-Martínez, María Gracia Luigi‐Sierra, Amparo M. Martínez, Juan Vicente Delgado Bermejo, J. Jordana, Ahmed A. K. Salama, X. Such et al. · 2026 · Animals
42. A hypothetical intracellular ADAMTS4–HMOX1 regulatory axis in expansion-induced chondrocyte dedifferentiation
    Zhenxing Wei, Ningrui Zhang, Wanyi Kou, Yifan Zhang, Wenqi Sha, Chensi Xu, Yuran Lei, Kun Liao, Danni Liang, Jihong Wang et al. · 2026 · Medical Hypotheses
43. Elucidating molecular mechanisms of allergic sensitization to olive pollen through transcriptomics
    Pedro Chacón, Leticia Domínguez-Cereijo, Bouchra Doukkali, Lourdes Fernández-Delgado, Beatriz María Pérez-Machuca, Rosa Gil-Calderón, Adrián López-Postigo, Eloísa Andújar Pulido, Mónica Pérez Alegre, James Richard Perkins et al. · 2026 · Frontiers in Immunology
44. Skeletal muscle transcriptome alterations associated with ketosis in postpartum dairy cows
    Lisa M. Avila-Granados, Theresa Casey, Jyothi Thimmapuram, Natnicha Taechachokevivat, R.C. Neves · 2026 · Journal of Dairy Science
45. Systems Biology to Identify Biomarkers of Neonatal Vaccine Immunogenicity
    Ofer Levy · 2022 · London School of Hygiene & Tropical Medicine
46. Unique transcriptomic landscapes identified in isPTB and infectiion-PTB/AHC
    Heather Brockway · 2020 · ImmPort