Cited by 150Virus-based gene therapy researchProtein purification and stabilityViral Infectious Diseases and Gene Expression in Insects

Analytical Ultracentrifugation as an Approach to Characterize Recombinant Adeno-Associated Viral Vectors

Burnham, Brenda, Nass, Shelley, Kong, Elton, Mattingly, MaryEllen, Woodcock, Denise, Song, Antonius, Wadsworth, Samuel, Cheng, Seng H. +2 more·2015·Human Gene Therapy Methods

Abstract

Recombinant adeno-associated viral (rAAV) vectors represent a novel class of biopharmaceutical drugs. The production of clinical-grade rAAV vectors for gene therapy would benefit from analytical methods that are able to monitor drug product quality with regard to homogeneity, purity, and manufacturing consistency. Here, we demonstrate the novel application of analytical ultracentrifugation (AUC) to characterize the homogeneity of preparations of rAAV vectors. We show that a single sedimentation velocity run of rAAV vectors detected and quantified a number of different viral species, such as vectors harboring an intact genome, lacking a vector genome (empty particles), and containing fragmented or incomplete vector genomes. This information is obtained by direct boundary modeling of the AUC data generated from refractometric or UV detection systems using the computer program SEDFIT. Using AUC, we show that multiple parameters contributed to vector quality, including the AAV genome form (i.e., self-complementary vs. single-stranded), vector genome size, and the production and purification methods. Hence, AUC is a critical tool for identifying optimal production and purification processes and for monitoring the physical attributes of rAAV vectors to ensure their quality.

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Crossref · 10.1089/hgtb.2015.048

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References 48 · Cited by 150

Authors
Burnham, B., Nass, S., Kong, E., Mattingly, M., Woodcock, D., Song, A., Wadsworth, S., Cheng, S. H., Scaria, A., & O'Riordan, C. R.
Affiliations
  • Sanofi (United States) (US)
  • Gene Therapy, Genzyme, a Sanofi Company, Framingham, Massachusetts.
Venue
Human Gene Therapy Methods
Published
2015-12
Volume
26
Issue
6
Pages
228-242
ISSN
  • 1946-6536 (ISSN-L)
  • 1946-6544
OpenAlex
W1795014780
Cited by
150
References
48
Citations by year
2026: 9 · 2025: 16 · 2024: 22 · 2023: 32 · 2022: 11 · 2021: 25 · 2020: 8 · 2019: 11 · 2018: 7 · 2017: 5 · 2016: 3
FWCI
3.44
Type
journal article
Language
en
Open access
closed
Locations
  • Human Gene Therapy Methods (publishedVersion)
  • PubMed (publishedVersion)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Virus-based gene therapy research
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein purification and stability
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Viral Infectious Diseases and Gene Expression in Insects
Keywords
adeno-associated virus vectors, analytical ultracentrifugation, settling velocity, genome fragmentation, self-complementary AAV, drug quality, gene therapy vectors
MeSH terms
Dependovirus, Cell Line, Chromatography, Ion Exchange, Genetic Vectors, Humans, Plasmids, Transduction, Genetic, Ultracentrifugation, Virus Replication, Gene Expression, Genes, Reporter, Cell Culture Techniques, Transgenes

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