Cited by 14Alzheimer's disease research and treatmentsBioinformatics and Genomic NetworksComputational Drug Discovery Methods

Drug Target Prioritization for Alzheimer's Disease Using Protein Interaction Network Analysis

Podder, Avijit, Pandit, Mansi, Narayanan, Latha·2018·OMICS: A Journal of Integrative Biology

Abstract

Alzheimer's disease (AD) is an age-related neurodegenerative disorder that accounts for numerous deaths worldwide. AD is the most common cause of dementia, characterized by accumulation of fibrous amyloid beta protein in the brain with clinical symptoms, such as loss of intellectual and social skills, gradually leading to the death of brain cells. The genetic complexity of AD during disease progression requires a systems-level understanding to design viable therapeutics. We present an integrative computational analysis to prioritize AD-associated genes outlined through a protein–protein interaction network. Multiple topological parameters of the network were considered to target proteins which are accountable for disease susceptibility. Furthermore, in silico protein structure modeling and molecular dynamics simulation approaches were implemented to characterize presenilin 2 ( PSEN2 ) protein as one of the leading targets in the network. The findings are constructive to aid future drug discovery endeavors in the treatment of AD.

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Crossref · 10.1089/omi.2018.0131

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  • Integration with protein-protein interaction (PPI) networks has refined AD models by connecting transcriptomic and proteomic layers, particularly when combined with tissue-specific data or prior biological knowledge.

    “Integration with protein–protein interaction (PPI) networks has further refined AD models by connecting transcriptomic and proteomic layers, particularly when combined with tissue-specific data or prior biological knowledge303, 304, 305.”

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Authors
Podder, A., Pandit, M., & Narayanan, L.
Affiliations
University of Delhi (IN)
Corresponding author
Narayanan, Latha
Venue
OMICS: A Journal of Integrative Biology
Published
2018-10-01
Volume
22
Issue
10
Pages
665-677
ISSN
  • 1536-2310 (ISSN-L)
  • 1557-8100
OpenAlex
W2896930416
Cited by
14
References
2
Citations by year
2026: 1 · 2025: 5 · 2024: 2 · 2023: 2 · 2022: 1 · 2020: 1 · 2019: 2
FWCI
0.52
Type
journal article
Language
en
Open access
closed
Locations
  • OMICS A Journal of Integrative Biology (publishedVersion)
  • PubMed (publishedVersion)
Funders
Department of Biotechnology, Ministry of Science and Technology, India
Topics
  • Health Sciences › Medicine › Physiology › Alzheimer's disease research and treatments
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Bioinformatics and Genomic Networks
  • Physical Sciences › Computer Science › Computational Theory and Mathematics › Computational Drug Discovery Methods
Keywords
Alzheimer's disease, drug target prioritization, protein-protein interaction network, network topology, presenilin 2, amyloid-beta, molecular dynamics simulation, drug discovery
MeSH terms
Alzheimer Disease, Computer Simulation, Models, Molecular, Drug Delivery Systems, Protein Structure, Tertiary, Disease Progression, Molecular Dynamics Simulation, Protein Interaction Maps

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