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The impact of taxon sampling on phylogenetic inference: a review of two decades of controversy

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Nabhan, A. R., Sarkar, I. N.·2012·Briefings in Bioinformatics

Abstract

Over the past two decades, there has been a long-standing debate about the impact of taxon sampling on phylogenetic inference. Studies have been based on both real and simulated data sets, within actual and theoretical contexts, and using different inference methods, to study the impact of taxon sampling. In some cases, conflicting conclusions have been drawn for the same data set. The main questions explored in studies to date have been about the effects of using sparse data, adding new taxa, including more characters from genome sequences and using different (or concatenated) locus regions. These questions can be reduced to more fundamental ones about the assessment of data quality and the design guidelines of taxon sampling in phylogenetic inference experiments. This review summarizes progress to date in understanding the impact of taxon sampling on the accuracy of phylogenetic analysis.

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Metadata

Authors
Nabhan, A. R., & Sarkar, I. N.
Venue
Briefings in Bioinformatics
Published
2011-03-23
Volume
13
Issue
1
Pages
122-134
ISSN
  • 1467-5463 (ISSN-L)
  • 1477-4054
OpenAlex
W2150178057
Cited by
234
References
13
FWCI
3.41
Type
journal article
Language
en
Open access
bronze

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CoChat. (2026). Citation check: The impact of taxon sampling on phylogenetic inference: a review of two decades of controversy. https://app.cochat.ai/papers/10.1093/bib/bbr014
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Nabhan, A. R., & Sarkar, I. N. (2012). The impact of taxon sampling on phylogenetic inference: a review of two decades of controversy. Briefings in Bioinformatics. https://doi.org/10.1093/bib/bbr014

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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).

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