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S toch S im: modelling of stochastic biomolecular processes
Open accessAbstract
Summary: StochSim is a stochastic simulator for chemical reactions. Molecules are represented as individual software objects that react according to probabilities derived from concentrations and rate constants. Version 1.2 of StochSim provides a novel cross-platform graphical interface written in Perl/Tk. A simple two-dimensional spatial structure has also been implemented, in which nearest-neighbour interactions of molecules in a 2-D lattice can be simulated. Availability: Various ports of the program can be retrieved at ftp://ftp.cds.caltech.edu/pub/dbray/ Contact: nl223@cus.cam.ac.uk; tss26@cam.ac.uk * To whom correspondence should be addressed.
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Cited by
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Rao, C. V., Wolf, D. M., & Arkin, A. P. (2002) · Nature · doi:10.1038/nature01258 · Cited by 1,006
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Metadata
- Authors
- Le Novère, N., & Shimizu, T. S.
- Venue
- Bioinformatics
- Publisher
- Oxford University Press (OUP)
- Published
- 2001-06-01
- Volume
- 17
- Issue
- 6
- Pages
- 575-576
- ISSN
- 1367-4803 (ISSN-L)
- 1367-4811
- OpenAlex
- W2111682035
- Cited by
- 198
- References
- 0
- FWCI
- 2.61
- Type
- journal article
- Language
- en
- Open access
- bronze
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