The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.
R/qtl: QTL mapping in experimental crosses
Abstract
Summary: R/qtl is an extensible, interactive environment for mapping quantitative trait loci (QTLs) in experimental populations derived from inbred lines. It is implemented as an add-on package for the freely-available statistical software, R, and includes functions for estimating genetic maps, identifying genotyping errors, and performing single-QTL and two-dimensional, two-QTL genome scans by multiple methods, with the possible inclusion of covariates. Availability: The package is freely available at http://www.biostat.jhsph.edu/~kbroman/qtl. Contact: kbroman@jhsph.edu * To whom correspondence should be addressed. † Present address: Department of Epidemiology and Biostatistics, University of California, San Francisco, CA 94143, USA.
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Cites
Maximum Likelihood from Incomplete Data Via the EM Algorithm
Dempster, A. P., Laird, N. M., & Rubin, D. B. (1977) · Journal of the Royal Statistical Society Series B: Statistical Methodology · doi:10.1111/j.2517-6161.1977.tb01600.x · Cited by 50,444
Haley, C. S., & Knott, S. A. (1992) · Heredity · doi:10.1038/hdy.1992.131 · Cited by 1,991
Cited by
Matrix eQTL: ultra fast eQTL analysis via large matrix operations
Shabalin, A. A. (2012) · Bioinformatics · doi:10.1093/bioinformatics/bts163 · Cited by 1,694
Stegle, O., Parts, L., Piipari, M., Winn, J., & Durbin, R. (2012) · Nature Protocols · doi:10.1038/nprot.2011.457 · Cited by 1,049
Quirós, P. M., Prado, M. A., Zamboni, N., D’Amico, D., Williams, R. W., Finley, D., Gygi, S. P., & Auwerx, J. (2017) · Journal of Cell Biology · doi:10.1083/jcb.201702058 · Cited by 832
Chesler, E. J., Lu, L., Shou, S., Qu, Y., Gu, J., Wang, J., Hsu, H. C., Mountz, J. D., Baldwin, N. E., Langston, M. A., et al. (2005) · Nature Genetics · doi:10.1038/ng1518 · Cited by 719
Malosetti, M., Ribaut, J.-M., & van Eeuwijk, F. A. (2013) · Frontiers in Physiology · doi:10.3389/fphys.2013.00044 · Cited by 539
“Other packages that calculate those probabilities and that are free are Grafgen (Servin et al., 2002) and r/qtl (Broman et al., 2003).”
Background
Metadata
- Authors
- Broman, K. W., Wu, H., Sen, Ś., & Churchill, G. A.
- Venue
- Bioinformatics
- Publisher
- Oxford University Press (OUP)
- Published
- 2003-05-01
- Volume
- 19
- Issue
- 7
- Pages
- 889-890
- ISSN
- 1367-4803 (ISSN-L)
- 1367-4811
- OpenAlex
- W2116053845
- Cited by
- 3,463
- References
- 2
- FWCI
- 23.44
- Type
- journal article
- Language
- en
- Open access
- closed
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