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Cited by 1,091

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Circular genome visualization and exploration using CGView

Open access
Stothard, Paul, Wishart, David S.·2005·Bioinformatics
DOI 10.1093/bioinformatics/bti054
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Abstract

Summary: CGView (Circular Genome Viewer) is a Java application and library for generating high-quality, zoomable maps of circular genomes. It converts XML or tab-delimited input into a graphical map (PNG, JPG or Scalable Vector Graphics format), complete with sequence features, labels, legends and footnotes. In addition to the default full view map, the program can generate a series of hyperlinked maps showing expanded views. The linked maps can be explored using any Web browser, allowing rapid genome browsing and facilitating data sharing. Availability: CGView (the standalone application, library or applet), sample input, sample maps and documentation can be obtained from http://wishart.biology.ualberta.ca/cgview/ Contact: david.wishart@ualberta.ca

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Metadata

Authors
Stothard, P., & Wishart, D. S.
Venue
Bioinformatics
Publisher
Oxford University Press (OUP)
Published
2004-10-12
Volume
21
Issue
4
Pages
537-539
ISSN
  • 1367-4803 (ISSN-L)
  • 1367-4811
DOI
10.1093/bioinformatics/bti054
OpenAlex
W2157748357
Cited by
1,091
References
0
FWCI
2.51
Type
journal article
Language
en
Open access
bronze

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CoChat. (2026). Citation check: Circular genome visualization and exploration using CGView. https://app.cochat.ai/papers/10.1093/bioinformatics/bti054
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Stothard, P., & Wishart, D. S. (2005). Circular genome visualization and exploration using CGView. Bioinformatics. https://doi.org/10.1093/bioinformatics/bti054

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Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.