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Heterogeneity in the mutations responsible for X chromosome-linked Kallmann syndrome
Abstract
Kallmann syndrome represents the association of hypogonadotropic hypogonadism with anosmia. Three modes of transmission, X chromosome-linked, autosomal recessive and autosomal dominant, have been described. The KAL gene, responsible for the X-linked form of the disease, has been isolated and its intron-exon organization recently determined. We have searched for mutations of the KAL gene in 21 unrelated males affected by familial Kallmann syndrome. In these families, segregation of the disease was suggestive of the X-linked mode of transmission. In 2 families, large Xp22.3 deletions, both including the entire KAL gene, have been detected by Southern blot analysis. Here we report the sequence analysis of the entire coding region of the KAL gene in the 19 remaining patients. The approach consisted of sequencing each of the 14 coding exons and splice site junctions. Each exon was amplified by PCR on the genomic DNA, using oligonucleotides from the flanking intronic sequences as specific primers. Nine point mutations were identified at separate locations in four exons and one splice site, providing strong evidence for heterogeneity in mutations responsible for the X-linked Kallmann syndrome. In addition, the high frequency of unilateral renal aplasia in X-linked Kallmann patients (6 out of 11 males with identified alterations of the KAL gene) should be emphasized.
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“Mutations in KAL1 disrupt the migration of olfactory and GnRH neurons and are reported to be present in approximately 5–10% of patients with Kallmann syndrome (Table 1),7,9–11 with the highest prevalence seen in families with X-linked inheritance patterns.”
From The genetic and molecular basis of idiopathic hypogonadotropic hypogonadism (2009) · cites this paper as [10]
In the citing paper
“Mutations in KAL1 disrupt the migration of olfactory and GnRH neurons”
From The genetic and molecular basis of idiopathic hypogonadotropic hypogonadism (2009) · cites this paper as [10]
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Boehm, U., Bouloux, P.-M., Dattani, M. T., de Roux, N., Dodé, C., Dunkel, L., Dwyer, A. A., Giacobini, P., Hardelin, J.-P., Juul, A., et al. (2015) · Nature Reviews Endocrinology · doi:10.1038/nrendo.2015.112 · Cited by 874
Self-citationGlycans and neural cell interactions
KLEENE, R. B., & Schachner, M. (2004) · Nature reviews. Neuroscience · doi:10.1038/nrn1349 · Cited by 522
“( Box 1 ), and a mutation of this motif in the Kallmann's syndrome protein anosmin leads to olfactory defect”
BackgroundJiang, Y.-H., Yuen, R. K. C., Jin, X., Wang, M., Chen, N., Wu, X., Ju, J., Mei, J., Shi, Y., He, M., et al. (2013) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2013.06.012 · Cited by 474
“We evaluated the approach by using the validation results of (1) all genomic de novo SNVs in one family (2-1266) and (2) Sanger”
MethodKallmann Syndrome: Mutations in the Genes Encoding Prokineticin-2 and Prokineticin Receptor-2
Dodé, C., Teixeira, L., Levilliers, J., Fouveaut, C., Bouchard, P., Kottler, M.-L., Lespinasse, J., Lienhardt-Roussie, A., Mathieu, M., Moerman, A., et al. (2006) · PLoS Genetics · doi:10.1371/journal.pgen.0020175 · Cited by 457
“The primers used for the KAL1 and FGFR1 coding exons have been reported [9,10].”
MethodSelf-citationSeminara, S. B., Hayes, F. J., & Crowley, W. F. (1998) · Endocrine Reviews · doi:10.1210/edrv.19.5.0344 · Cited by 419
Digenic mutations account for variable phenotypes in idiopathic hypogonadotropic hypogonadism
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Self-citationThe genetic and molecular basis of idiopathic hypogonadotropic hypogonadism
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“neural-cell adhesion molecules, as well as with other molecules involved in neuronal migration and axonal pathfinding (25,26).”
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Male Hypogonadism Due to a Mutation in the Gene for the β-Subunit of Follicle-Stimulating Hormone
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“Details of some of the patients have been presented in previous publications (Hardelin et al., 1992, 1993a, 1993b; Kirk et al., 1994; Quinton et al., 1996a, 1996b, 1997, 1999b; Krams et al., 1997, 1999; Mayston et al., 1997; Duke et al., 1998).”
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Self-citationSato, N. S., Katsumata, N., Kagami, M., Hasegawa, T., Hori, N., KAWAKITA, S., Minowada, S., Shimotsuka, A., Shishiba, Y., Yokozawa, M., et al. (2004) · The Journal of Clinical Endocrinology & Metabolism · doi:10.1210/jc.2003-030476 · Cited by 216
“The primer sequences, annealing temperatures, and PCR product sizes for KAL1 are as reported (14), and those for FGFR1 are shown in Table 2.”
BackgroundMethodResultInfluentialSEMA3A, a gene involved in axonal pathfinding, is mutated in patients with Kallmann syndrome
Hanchate, N. K., Giacobini, P., Lhuillier, P., Parkash, J., Espy, C., Fouveaut, C., Leroy, C., Baron, S., Campagne, C., Vanacker, C., et al. (2012) · PLoS Genetics · doi:10.1371/journal.pgen.1002896 · Cited by 217
“Barely 30% of the KS patients have mutations in any of the eight genes known so far, specifically, KAL1 (ID 3730) [5–7], FGFR1 (ID 2260) [8], FGF8 (ID 2253) [9], PROKR2 (ID 128674), PROK2 (ID 60675) [10], WDR11 (ID 55717) [11], HS6ST1 (ID 9394) [12], CHD7 (ID 55636) [13,14], and current efforts thus concentrate on the…”
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“Both neurologic defects (synkinesia and hearing loss) and non-neurologic defects (renal aplasia, high arched palate, labial or palatine cleft and dental agenesis) occur with variable frequency in KS ( Hardelin et al., 1993; Quinton et al., 2001).”
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Self-citationThe Complex Genetics of Kallmann Syndrome: KAL1, FGFR1, FGF8, PROKR2, PROK2, et al.
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“For instance, unilateral renal agenesis occurs in approximately 30% of KAL1 patients [Hardelin et al., 1993a; Kirk et al., 1994], but has not been reported in patients with FGFR1, FGF8, PROKR2 or PROK2 mutations so far.”
BackgroundInfluentialSelf-citationDeneault, E., White, S. H., Rodrigues, D. C., Ross, P. J., Faheem, M., Zaslavsky, K., Wang, Z., Alexandrova, R., Pellecchia, G., Wei, W., et al. (2018) · Stem Cell Reports · doi:10.1016/j.stemcr.2018.10.003 · Cited by 145
Human gene mutations causing infertility
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“The 14 exons of the KAL1 gene were PCR-amplified and directly sequenced using one PCR oligonucleotide as primer according to Hardelin et al., 1993.”
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Self-citationHypogonadotropic Hypogonadism in a Female Caused by an X-Linked Recessive Mutation in theDAX1Gene
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“Mutations in Kallmann syndrome 1 (KAL-1) [42–44] and fibroblast growth factor receptor 1 (FGFR1) [45] have been implicated in the X-linked and autosomal dominant forms of the disease, respectively, but appear to account for only approximately 20% of patients with KS [46].”
BackgroundContemporary issues in primary amenorrhea
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Human GnRH Deficiency: A Unique Disease Model to Unravel the Ontogeny of GnRH Neurons
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Self-citationWhat controls the timing of puberty? An update on progress from genetic investigation
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“Among the various anomalies associated with X-linked KS (9, 21), upper limb mirror movements (bimanual synkinesis) and unilateral renal aplasia are often encountered, because they affect over three fourths and one third of the patients, respectively (23, 24).”
BackgroundMethodSelf-citationUnilateral renal aplasia in X‐linked Kallmann's syndrome
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Self-citationKallmann syndrome: fibroblast growth factor signaling insufficiency?
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“Most of the occasional anomalies, however, can be attributed to the mutated KAL genes [1, 2, 15], and they may be present in more than one genetic form of the disease, albeit with different prevalences (Table 3).”
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“Recessive X-linked KS is caused by mutations in the KAL1 gene (Franco et al., 1991; Hardelin et al., 1992, 1993; Legouis et al., 1991), which encodes a secreted protein, anosmin-1.”
Clinical genetics of Kallmann syndrome
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Self-citationGenetics of hypogonadotropic hypogonadism
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“The primers and programmes used for KAL1, FGFR1 and GnRHR coding exon analysis have been reported elsewhere (Hardelin et al., 1993; Sato et al., 2004; Antelli et al., 2006).”
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“Unilateral renal agenesis in this patient is likely related to this deleterious KAL1 mutation(43).”
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“This has clinical relevance in affected patients as up to 50% of males with KAL1 mutations may have unilateral renal agenesis (Hardelin et al., 1993).”
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“…to the flanking regions of the KAL-1 and GnRH-R exons, sizes of the amplified products and amplification conditions were as reported by Hardelin et al. (1993) and Beranova et al. (2001) respectively, and those for NELF (NM_015537) and EBF2 (NM_022659) are shown in Tables 2 and 3…”
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An ancient founder mutation in PROKR2 impairs human reproduction
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“PROKR2 mutations have been implicated in diverse oligogenic interactions, including mutations in other genes regulating GnRH neuron ontogeny such as PROK2, KAL1 and FGFR1 (11,12,15–17,34).”
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“Initially, gene deletions were identified by Southern blot analysis (Bick et al., 1992), but a variety of point mutations were later characterized ( Hardelin et al., 1993 ).”
BackgroundMethodInfluentialNovel Insights into the Aetiology and Pathogenesis of Hypopituitarism
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Novel insights in FGFR1 regulation: lessons from Kallmann syndrome
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“Mutation analysis of patients with Xlinked Kallmann syndrome has revealed a spectrum of coding sequence abnormalities (40, 41).”
BackgroundLouden, E. D., Poch, A., Kim, H., Ben‐Mahmoud, A., Kim, S., & Layman, L. C. (2021) · Molecular and Cellular Endocrinology · doi:10.1016/j.mce.2021.111334 · Cited by 34
Renal dysgenesis and KAL1 gene defects in patients with sporadic Kallmann syndrome
Georgopoulos, N. A., Koika, V., Galli‐Τsinopoulou, A., Spiliotis, B. E., Adonakis, G. L., Keramida, M. K., Sgourou, A., Koufogiannis, K. D., Papachatzopoulou, A., Papavassiliou, A. G., et al. (2007) · Fertility and Sterility · doi:10.1016/j.fertnstert.2006.12.044 · Cited by 35
The Role of Prokineticins in the Pathogenesis of Hypogonadotropic Hypogonadism
Abreu, A. P., Kaiser, U. B., & Latronico, A. C. (2010) · Neuroendocrinology · doi:10.1159/000308880 · Cited by 36
Mutations in human gonadotropin genes and their physiologic significance in puberty and reproduction
Layman, L. C. (1999) · Fertility and Sterility · doi:10.1016/s0015-0282(98)00431-2 · Cited by 31
Al-Sayed, Y., & Howard, S. R. (2022) · European Journal of Human Genetics · doi:10.1038/s41431-022-01261-0 · Cited by 36
“Thus, genes such as ANOS1 (MIM 300836) [33, 34], CHD7 (MIM 608892) [7, 35], FGFR1 (MIM 136350) [36, 37], PROKR2 (MIM 607123) [38, 39], GNRHR (MIM 138850) [38, 40], TACR3 (MIM 162332) [41, 42] – indeed the majority of these 14 genes – have been repeatedly validated in international cohorts of patients with CHH and KS,…”
BackgroundInherited disorders of the gonadotropin hormones
Jameson, J. L. (1996) · Molecular and Cellular Endocrinology · doi:10.1016/s0303-7207(96)03950-0 · Cited by 32
Olfactory System and Demyelination
García‐González, D., Murcia‐Belmonte, V., Clemente, D., & Castro, F. D. (2013) · The Anatomical Record · doi:10.1002/ar.22736 · Cited by 31
“…and intoxication, tumors and skull-cephalic traumas, and the paradigmatic case of genetic anosmia with hypogonadotrophic hypogonadism: Kallmann syndrome (KS; Maestre de San Juan, 1856; Kallmann et al., 1944; Shepherd, 1988; Hardelin et al., 1993; Victor and Ropper, 2001; Dod e and Hardelin, 2009).”
BackgroundGenetic and Environmental Correlates of Semen Quality
Storgaard, L., Bonde, J. P., Ernst, E., et al. (2006) · Epidemiology · doi:10.1097/01.ede.0000239730.47963.4e · Cited by 31
Renal abnormalities in patients with Kallmann syndrome
Zenteno, Méndez, Maya‐Núñez, et al. (1999) · British Journal of Urology · doi:10.1046/j.1464-410x.1999.00027.x · Cited by 31
Two independent mutations in a family with neurofibromatosis type 1 (NF1)
Harder, A., Peters, H., Hoffmeyer, S., Buske, A., L�der, A., He�, D., Lehmann, R., N�rnberg, P., & Tinschert, S. (1999) · American Journal of Medical Genetics · doi:10.1002/(sici)1096-8628(19990305)83:1 · Cited by 34
Clinical Genetic Testing for Kallmann Syndrome
Layman, L. C. (2013) · The Journal of Clinical Endocrinology & Metabolism · doi:10.1210/jc.2013-1624 · Cited by 30
“The identification of renal agenesis in the RSV-negative group is perhapsunexpectedbecause it hasbeenacommonfinding in males with KAL1 mutations (12).”
BackgroundX-linked GnRH deficiency: Role of KAL-1 mutations in GnRH deficiency
Hu, Y., & Bouloux, P.-M. G. (2011) · Molecular and Cellular Endocrinology · doi:10.1016/j.mce.2011.04.001 · Cited by 31
Self-citationGonçalves, C. I., Fonseca, F., Borges, T., Cunha, F. M., & Lemos, M. C. (2016) · Human Reproduction · doi:10.1093/humrep/dew354 · Cited by 29
“Primer sequences were previously described (Hardelin et al., 1993), except for the forward primer for exon 1 (5’-TGGGAGGGAGGTCGGCGAGGAGGG-3’) and the reverse primer for exon 10 (5’-GTGAATGGATAAAAGAATGAGTGA-3’), which were designed using Primer 3 Plus (Untergasser et al., 2007).”
MethodThe Molecular Basis of Human Hypogonadotropic Hypogonadism
Layman, L. C. (1999) · Molecular Genetics and Metabolism · doi:10.1006/mgme.1999.2912 · Cited by 26
A novel mutation of the KAL1 gene in monozygotic twins with Kallmann syndrome
Matsuo, T., Okamoto, S., Izumi, Y., et al. (2000) · European Journal of Endocrinology · doi:10.1530/eje.0.1430783 · Cited by 29
Murcia‐Belmonte, V., Medina-Rodriguez, E. M., Bribián, A., de Castro, F., & Esteban, P. F. (2013) · Glia · doi:10.1002/glia.22609 · Cited by 29
“The E514K and F517L substitutions in FnIII.3 produce a 2-fold and a 6-fold reduced binding affinity to FGFR1 in vitro (Hu et al., 2009), or impede the binding of FnIII.3 (Murcia-Belmonte et al., 2010), canceling the chemotropic effect of anosmin-1 on GN11 cells and NPs (Cariboni et al., 2004; Murcia-Belmonte et al., 2…”
BackgroundInfluentialAnosmin-1 immunoreactivity during embryogenesis in a primitive eutherian mammal
Dellovade, T., Hardelin, J., Soussi‐Yanicostas, N., Pfaff, D. W., Schwanzel‐Fukuda, M., & Petit, C. (2003) · Developmental Brain Research · doi:10.1016/s0165-3806(02)00544-8 · Cited by 29
Self-citationA Novel Nonsense Mutation of the KAL Gene in Two Brothers withKallmann Syndrome
Jansen, C., Hendriks-Stegeman, B. I., & Jansen, M. (2000) · Hormone Research in Paediatrics · doi:10.1159/000023568 · Cited by 28
“The coding exons of the KAL gene were subsequently amplified by polymerase chain reaction (PCR). The sequences of the KAL primers, the sizes of the amplified products and the PCR conditions were previously described by Hardelin et al. [”
MethodReport of the Fourth International Workshop on Human X Chromosome Mapping 1993 (Part 1 of 4)
Schlessinger, D., Willard, H. F., & Mandel, J. (2008) · Cytogenetics and Cell Genetics · doi:10.1159/000133572 · Cited by 27
Metadata
- Authors
- Hardelin, J.-P., Levilliers, J., Blanchard, S., Carel, J.-C., Leutenegger, M., Pinard-Bertelletto, J.-P., Bouloux, P., & Petit, C.
- Affiliations
- Centre National de la Recherche Scientifique (FR)
- Hôpital Saint-Vincent-de-Paul (FR)
- Royal Free London NHS Foundation Trust (GB)
- Corresponding author
- Petit, Christine
- Venue
- Human Molecular Genetics
- Publisher
- Oxford University Press (OUP)
- Published
- 1993
- Volume
- 2
- Issue
- 4
- Pages
- 373-377
- ISSN
- 0964-6906 (ISSN-L)
- 1460-2083
- OpenAlex
- W2153635587
- Cited by
- 203
- References
- 0
- Citations by year
- 2024: 1 · 2023: 2 · 2022: 3 · 2021: 1 · 2020: 2 · 2018: 1 · 2017: 2 · 2016: 4 · 2015: 10 · 2014: 4 · 2013: 10 · 2012: 5
- FWCI
- 7.49
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Human Molecular Genetics (publishedVersion)
- PubMed (publishedVersion)
- HAL (submittedVersion)
- HighWire Press Open Archive (submittedVersion)
- Topics
- Health Sciences › Medicine › Reproductive Medicine › Hypothalamic control of reproductive hormones
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities
- Health Sciences › Medicine › Endocrinology, Diabetes and Metabolism › Sexual Differentiation and Disorders
- Keywords
- KAL1, hypogonadotropic hypogonadism, anosmia, mutational heterogeneity, point mutations, splice site mutation, renal aplasia, X-linked inheritance
- MeSH terms
- Amino Acid Sequence, Base Sequence, DNA, DNA Mutational Analysis, Humans, Genetic Linkage, Male, Molecular Sequence Data, Mutation, Oligodeoxyribonucleotides, X Chromosome, Point Mutation, Sequence Deletion, Kallmann Syndrome
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