Cited by 158Genetic Associations and EpidemiologyAdvanced Causal Inference TechniquesGenetic and phenotypic traits in livestock

Within family Mendelian randomization studies

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Davies, Neil M, Howe, Laurence J, Brumpton, Ben, Havdahl, Alexandra, Evans, David M, Davey Smith, George·2019·Human Molecular Genetics

Abstract

Mendelian randomization (MR) is increasingly used to make causal inferences in a wide range of fields, from drug development to etiologic studies. Causal inference in MR is possible because of the process of genetic inheritance from parents to offspring. Specifically, at gamete formation and conception, meiosis ensures random allocation to the offspring of one allele from each parent at each locus, and these are unrelated to most of the other inherited genetic variants. To date, most MR studies have used data from unrelated individuals. These studies assume that genotypes are independent of the environment across a sample of unrelated individuals, conditional on covariates. Here we describe potential sources of bias, such as transmission ratio distortion, selection bias, population stratification, dynastic effects and assortative mating that can induce spurious or biased SNP–phenotype associations. We explain how studies of related individuals such as sibling pairs or parent–offspring trios can be used to overcome some of these sources of bias, to provide potentially more reliable evidence regarding causal processes. The increasing availability of data from related individuals in large cohort studies presents an opportunity to both overcome some of these biases and also to evaluate familial environmental effects.

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Crossref · 10.1093/hmg/ddz204

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  • WS-MR is largely robust against demographic and indirect genetic effects that could distort estimates from nonfamily designs.

    “WS-MR is largely robust against demographic and indirect genetic effects that could distort estimates from nonfamily designs7,25.”
  • Within-family MR requires data from either pairs of siblings or mother-father-child trios and allows for estimation of causal effects using MR after family-level structure has been taken into account.

    “Within-family MR requires data from either pairs of siblings or mother–father–child trios and allows for estimation of causal effects using MR after family-level structure has been taken into account.164,167”

    From Mendelian randomization (2022) · cites this paper as [164]

  • Population stratification, dynastic effects and assortative mating all induce bias by creating an artefactual relation at the population level between the genetic variants and the outcome, violating the second IV condition.

    “However, population stratification, dynastic effects and assortative mating all induce bias by creating an artefactual relation at the population level between the genetic variants and the outcome, violating the second IV condition.65,163–166”

    From Mendelian randomization (2022) · cites this paper as [164]

  • Mendelian randomisation provides an opportunity to study the association between exposures and outcomes while reducing potential bias from confounding and reverse causation.

    “MR thus provides an opportunity to study the association between exposures and outcomes while reducing potential bias from confounding and reverse causation.9”

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References 70 · Cited by 158

Authors
Davies, N. M., Howe, L. J., Brumpton, B., Havdahl, A., Evans, D. M., & Davey Smith, G.
Affiliations
  • University of Bristol (GB)
  • Norwegian University of Science and Technology (NO)
  • Norwegian Institute of Public Health (NO)
  • The University of Queensland (AU)
  • Medical Research Council Integrative Epidemiology Unit, University of Bristol, Bristol, BS8 2BN, United Kingdom
Corresponding author
Davies, Neil M
Venue
Human Molecular Genetics
Published
2019-10-15
Volume
28
Issue
R2
Pages
R170-R179
ISSN
  • 0964-6906 (ISSN-L)
  • 1460-2083
OpenAlex
W2981338841
Cited by
158
References
70
Citations by year
2026: 15 · 2025: 27 · 2024: 28 · 2023: 16 · 2022: 24 · 2021: 33 · 2020: 15
FWCI
2.41
Type
journal article
Language
en
Open access
Locations
  • Human Molecular Genetics (publishedVersion)
  • PubMed (publishedVersion)
  • NORA - Norwegian Open Research Archives (submittedVersion, other-oa)
  • Bristol Research (University of Bristol) (submittedVersion)
Funders
  • Medical Research Council (MC_UU_12013/1, MC_UU_12013/9, MC_UU_00011/1)
  • Economics and Social Research Council (ES/N000757/1)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic Associations and Epidemiology
  • Physical Sciences › Mathematics › Statistics and Probability › Advanced Causal Inference Techniques
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic and phenotypic traits in livestock
Keywords
Mendelian randomization, sibling pairs, parent-offspring trios, causal inference, segregation distortion, selection bias, population stratification, assortative mating
MeSH terms
Family, Family Characteristics, Genotype, Humans, Population, Reproduction, Selection Bias, Polymorphism, Single Nucleotide, Sociobiology, Genetic Association Studies, Mendelian Randomization Analysis

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