The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.
The current status and portability of our sequence handling software
Open accessAbstract
I describe the current status of our sequence analysis software. The package contains a comprehensive suite of programs for managing large shotgun sequencing projects, a program containing 61 functions for analysing single sequences and a program for comparing pairs of sequences for similarity. The programs that have been described before have been improved by the addition of new functions and by being made very much easier to use. The major interactive programs have 125 pages of online help available from within them. Several new programs are described including screen editing of aligned gel readings for shotgun sequencing projects; a method to highlight errors in aligned gel readings, new methods for searching for putative signals in sequences. We use the programs on a VAX computer but the whole package has been rewritten to make it easy to transport it to other machines. I believe the programs will now run on any machine with a FORTRAN77 compiler and sufficient memory. We are currently putting the programs onto an IBM PC XT/AT and another micro running under UNIX.
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Cites
Rapid similarity searches of nucleic acid and protein data banks.
Wilbur, W. J., & Lipman, D. J. (1983) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.80.3.726 · Cited by 1,546
Cited by
Cooper, G. J., Willis, A. C., Clark, A., Turner, R. C., Sim, R. B., & Reid, K. B. (1987) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.84.23.8628 · Cited by 1,299
Analysis of the Protein-Coding Content of the Sequence of Human Cytomegalovirus Strain AD169
Chee, M. S., Bankier, A. T., Beck, S., Bohni, R., Brown, C. M., Cerny, R., Horsnell, T., Hutchison, C. A., Kouzarides, T., Martignetti, J. A., et al. (1990) · Current Topics in Microbiology and Immunology · doi:10.1007/978-3-642-74980-3_6 · Cited by 1,252
Belanger, A. E., Besra, G. S., Ford, M. E., Mikusová, K., Belisle, J. T., Brennan, P. J., & Inamine, J. M. (1996) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.93.21.11919 · Cited by 466
Equine arteritis virus is not a togavirus but belongs to the coronaviruslike superfamily
den Boon, J. A., Snijder, E. J., Chirnside, E. D., de Vries, A. A., Horzinek, M. C., & Spaan, W. J. (1991) · Journal of Virology · doi:10.1128/jvi.65.6.2910-2920.1991 · Cited by 391
Computational methods for the identification of genes in vertebrate genomic sequences
Claverie, J. (1997) · Human Molecular Genetics · doi:10.1093/hmg/6.10.1735 · Cited by 264
Metadata
- Authors
- Staden, R.
- Venue
- Nucleic Acids Research
- Publisher
- Oxford University Press (OUP)
- Published
- 1986
- Volume
- 14
- Issue
- 1
- Pages
- 217-231
- ISSN
- 0305-1048 (ISSN-L)
- 1362-4962
- OpenAlex
- W2121143615
- Cited by
- 350
- References
- 1
- FWCI
- 16.16
- Type
- journal article
- Language
- en
- Open access
- green
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- Staden, R. (1986). The current status and portability of our sequence handling software. Nucleic Acids Research. https://doi.org/10.1093/nar/14.1.217
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